BLASTX nr result
ID: Coptis23_contig00013417
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00013417
(1204 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270778.1| PREDICTED: uncharacterized protein LOC100259... 203 6e-50
emb|CAN69700.1| hypothetical protein VITISV_003292 [Vitis vinifera] 198 3e-48
ref|XP_002513429.1| conserved hypothetical protein [Ricinus comm... 194 4e-47
ref|XP_002310690.1| predicted protein [Populus trichocarpa] gi|2... 184 4e-44
ref|XP_002307196.1| predicted protein [Populus trichocarpa] gi|2... 182 1e-43
>ref|XP_002270778.1| PREDICTED: uncharacterized protein LOC100259352 [Vitis vinifera]
Length = 418
Score = 203 bits (517), Expect = 6e-50
Identities = 142/335 (42%), Positives = 176/335 (52%), Gaps = 47/335 (14%)
Frame = +2
Query: 20 KSSEDFEFQLEDSVKMLPADELFSDGKLMPLLNIQTNRLNXXXXXXXXDEELGLKSSISY 199
K DFEF+LED V MLPADELFSDGKL+PL Q + + E +++ S
Sbjct: 74 KDVGDFEFRLEDPVAMLPADELFSDGKLVPL---QVSVIRPSVASIPSSEIRSPETAKSR 130
Query: 200 EKSKILTGMGDPYLFSPKAPRCASGWREXXXXXXXXXXXXXXXXXXXXXXX-------NQ 358
++++ DPYLFSPKAPRC+S W+E +
Sbjct: 131 RRTEV--SCTDPYLFSPKAPRCSSRWKELLGLKKLYQSSNPKQENHKTTSSLYSHSTNAK 188
Query: 359 SLKHFRYRNPKS------DPSLGLPLLEQTDSDRV------------------ELPRVSL 466
SLKHF +R+ KS D SL LPLL +DS+ V +LPR+SL
Sbjct: 189 SLKHFLHRSSKSTSSSASDASLSLPLLRDSDSESVSMSSRLSLSSSSSGHEHEDLPRLSL 248
Query: 467 DSQKSHPSVKRQQN-----------HPPKVRLAR-RVQDXXXXXXXXXXXXXXXXXXXXX 610
DS+K PS N +PP+VR+ + R
Sbjct: 249 DSEKPKPSANPNPNPSSNASTTTNPNPPRVRVVKARASSSDHPPAARVGRSPMRRAPDSS 308
Query: 611 XMGVSMDSPRMNSSGKVVFQSLERSSSSPSTFNGGPRIKYKGMERRSYSANVSVTPVLNL 790
G S+DSPRMNSSGK+VFQSLERSSSSPS+FNGGPR K++GME RSYSANV +TPV L
Sbjct: 309 GRGASVDSPRMNSSGKIVFQSLERSSSSPSSFNGGPRFKHRGME-RSYSANVRITPV--L 365
Query: 791 NVPVGSLRGSSK----FGLGQLFPSHKKGGGGGTS 883
NVPV SLRGSSK FG GQLF S +K G ++
Sbjct: 366 NVPVCSLRGSSKSGGVFGFGQLFSSPQKREGSSSN 400
>emb|CAN69700.1| hypothetical protein VITISV_003292 [Vitis vinifera]
Length = 389
Score = 198 bits (503), Expect = 3e-48
Identities = 134/307 (43%), Positives = 168/307 (54%), Gaps = 19/307 (6%)
Frame = +2
Query: 20 KSSEDFEFQLEDSVKMLPADELFSDGKLMPLLNIQTNRLNXXXXXXXXDEELGLKSSISY 199
K DFEF+LED V MLPADELFSDGKL+PL Q + + E +++ S
Sbjct: 73 KDVGDFEFRLEDPVAMLPADELFSDGKLVPL---QVSVIRPSVXSIPSSEIRSPETAKSR 129
Query: 200 EKSKILTGMGDPYLFSPKAPRCASGWREXXXXXXXXXXXXXXXXXXXXXXX-------NQ 358
++++ DPYLFSPKAPRC+S W+E +
Sbjct: 130 RRTEV--SCTDPYLFSPKAPRCSSRWKELLGLKKLYQSSNPKQENHKTTSSLYSHSTNAK 187
Query: 359 SLKHFRYRNPKS------DPSLGLPLLEQTDSDRVELPRVSLDSQKSHPSVKRQQN-HPP 517
SLKHF +R+ KS D SL LPLL +DS+ L + + + N +PP
Sbjct: 188 SLKHFLHRSSKSTSSSASDASLSLPLLRDSDSESXNLNZAQIPNPNPSSNASTTTNPNPP 247
Query: 518 KVRLAR-RVQDXXXXXXXXXXXXXXXXXXXXXXMGVSMDSPRMNSSGKVVFQSLERSSSS 694
+VR+ + R GVS+DSPRMNSSGK+VFQSLERSSSS
Sbjct: 248 RVRVVKARASSSDHPPAARVGRSPMRRAPDSSGRGVSVDSPRMNSSGKIVFQSLERSSSS 307
Query: 695 PSTFNGGPRIKYKGMERRSYSANVSVTPVLNLNVPVGSLRGSSK----FGLGQLFPSHKK 862
PS+FNGGPR K++GME RSYSANV +TPV LNVPV SLRGSSK FG GQLF S +K
Sbjct: 308 PSSFNGGPRFKHRGME-RSYSANVRITPV--LNVPVCSLRGSSKSGGVFGFGQLFSSPQK 364
Query: 863 GGGGGTS 883
G ++
Sbjct: 365 REGSSSN 371
>ref|XP_002513429.1| conserved hypothetical protein [Ricinus communis]
gi|223547337|gb|EEF48832.1| conserved hypothetical
protein [Ricinus communis]
Length = 413
Score = 194 bits (493), Expect = 4e-47
Identities = 142/349 (40%), Positives = 176/349 (50%), Gaps = 59/349 (16%)
Frame = +2
Query: 32 DFEFQLEDSVKMLPADELFSDGKLMPL-LNIQTNRLNXXXXXXXXDEELGLKSSISYEKS 208
DFEF+L+D V MLPADELFSDGKL+PL +N +N E KS S
Sbjct: 61 DFEFRLDDPVTMLPADELFSDGKLVPLQVNNIKAAVNSGLSEMRSPETTTAKSCRSRIME 120
Query: 209 KILTGMGDPYLFSPKAPRCASGWREXXXXXXXXXXXXXXXXXXXXXXX---------NQS 361
++G DPYLFSPKAPRC+S W+E +S
Sbjct: 121 MEISGT-DPYLFSPKAPRCSSRWKELLGLKKLYQNANSSKAENHKTASLSSSNPNPNPKS 179
Query: 362 LKHFRYRNPKS---------DPSLGLPLLEQTDSDRV-------------------ELPR 457
LKHF +R+ KS D SL LPLL+ +D + V +LPR
Sbjct: 180 LKHFLHRSSKSCSCNSSSTSDHSLSLPLLKDSDCESVSISSSRLSLSSSSSGHDHEDLPR 239
Query: 458 VSLDSQKSHPSVKRQQN----------HPPKVRLARRVQDXXXXXXXXXXXXXXXXXXXX 607
+SLDS+K +P+ N +PP++R+ + +
Sbjct: 240 LSLDSEKPNPNTNPNPNPFVLNRNPNQNPPRMRMVKPRSEINNANGNSSNNPAAGNRVGR 299
Query: 608 XXM----------GVSMDSPRMNSSGKVVFQSLERSSSSPSTFNGGPRIKYKGMERRSYS 757
M GVS+DSPRMNSSGK+VFQSLERSSSSPS+FNGGPR K++GME RSYS
Sbjct: 300 SPMRRSAEDQSSRGVSVDSPRMNSSGKIVFQSLERSSSSPSSFNGGPRFKHRGME-RSYS 358
Query: 758 ANVSVTPVLNLNVPVGSLRGSSK-FGLGQLFPSHKKGGGGGTSADLSDK 901
ANV VTPV LNVPV SLRG+SK FG GQLF S + A L +
Sbjct: 359 ANVRVTPV--LNVPVCSLRGTSKSFGFGQLFSSSPQKRESSNKAQLQQQ 405
>ref|XP_002310690.1| predicted protein [Populus trichocarpa] gi|222853593|gb|EEE91140.1|
predicted protein [Populus trichocarpa]
Length = 453
Score = 184 bits (467), Expect = 4e-44
Identities = 138/364 (37%), Positives = 173/364 (47%), Gaps = 80/364 (21%)
Frame = +2
Query: 2 IDGAENKSSEDFEFQLEDSVKMLPADELFSDGKLMPLLNIQTNRLNXXXXXXXXDEELGL 181
+D E+ S DFEF+L++S+ MLPADELFSDGKLMPL + T + G+
Sbjct: 62 LDPLESLDSGDFEFRLDNSITMLPADELFSDGKLMPL-QVNTGNIRPSLSSSTSTLTEGI 120
Query: 182 KSSIS-------YEKSKILTGMGDPYLFSPKAPRCASGWREXXXXXXXXXXXXXXXXXXX 340
+S + ++ DPYLFSPKAPRC+S W+E
Sbjct: 121 RSPEPGREPVKCCRRLEMEISGADPYLFSPKAPRCSSRWKEFLGLKKLHQNPKSEKSTTS 180
Query: 341 XXXXN-------QSLKHFRYRNPKS-----------------DPSLGLPLLEQTDSDRV- 445
+ +SLKHF +RN K+ D SL LPLL D + +
Sbjct: 181 ALLFSSSSSSNSKSLKHFLHRNSKTCSCNTSSSNSSFSYTILDHSLSLPLLRDLDRESLS 240
Query: 446 -----------------ELPRVSLDSQKSHPSVKRQQN------------------HPPK 520
+LPR+SLDS K + + QN +PP+
Sbjct: 241 ISSRLSLSSSSSSHEHEDLPRLSLDSDKPNTGLNTMQNPGPNPFILNRNPNQNQNQNPPR 300
Query: 521 VRLARRVQDXXXXXXXXXXXXXXXXXXXXXX---------MGVSMDSPRMNSSGKVVFQS 673
+R+ + + GVS+DSPRMNSSGK+VFQS
Sbjct: 301 MRMVKPRSENGNSNNGTSSTRVGRSPMRRSAGESSEVSISRGVSVDSPRMNSSGKIVFQS 360
Query: 674 LERSSSSPSTFNGGPRIKYKGMERRSYSANVSVTPVLNLNVPVGSLRGSSK----FGLGQ 841
LERSSSSPS+FNGGPR K +GME RSYSANV VTPV LNVPV SLRGSSK FG GQ
Sbjct: 361 LERSSSSPSSFNGGPRYKQRGME-RSYSANVRVTPV--LNVPVCSLRGSSKSGSVFGFGQ 417
Query: 842 LFPS 853
LF S
Sbjct: 418 LFSS 421
>ref|XP_002307196.1| predicted protein [Populus trichocarpa] gi|222856645|gb|EEE94192.1|
predicted protein [Populus trichocarpa]
Length = 474
Score = 182 bits (463), Expect = 1e-43
Identities = 139/364 (38%), Positives = 174/364 (47%), Gaps = 80/364 (21%)
Frame = +2
Query: 2 IDGAENKSSEDFEFQLEDSVKMLPADELFSDGKLMPL-LNIQTNRLNXXXXXXXXDEEL- 175
+D E K S DFEF+L++S MLPADELFSDGKLMPL +N + + EL
Sbjct: 70 LDPPETKDSVDFEFRLDNSFTMLPADELFSDGKLMPLQINTGNAKPSLPPSTSTSVNELT 129
Query: 176 --------GLKSSISYEKSKILTGMGDPYLFSPKAPRCASGWREXXXXXXXXXXXXXXXX 331
G + S + ++ DPYLFSPKAPRC+S W+E
Sbjct: 130 EAVRLPEPGREPVKSCRRLEMEISGTDPYLFSPKAPRCSSRWKELLGLKKLHQNPKPETQ 189
Query: 332 XXXXXXX--------NQSLKHFRYRNPKS-----------------DPSLGLPLLEQTDS 436
+SLKH +RN K+ D SL LPLL D
Sbjct: 190 KPSTRTALFSSSSSNPKSLKHILHRNSKTCNCNTSSSSSSFSYTLLDNSLSLPLLRDLDC 249
Query: 437 DRV-------------------ELPRVSLDSQKSHPSVKRQQN--------------HPP 517
+ + +LPR+SLDS K ++ QN +PP
Sbjct: 250 ESLSISSSRLSLSSSSSSHEHEDLPRLSLDSDKPSTNLNLMQNPVPNPFILNRNQNQNPP 309
Query: 518 KVRLARRVQDXXXXXXXXXXXXXXXXXXXXXXMG----------VSMDSPRMNSSGKVVF 667
++R+ + + + G VS+DSPRMNSSGK+VF
Sbjct: 310 RMRMVKPLSENGNNNSGTSSTTRVGRSPMRRAAGESSEVSISSGVSVDSPRMNSSGKIVF 369
Query: 668 QSLERSSSSPSTFNGGPRIKYKGMERRSYSANVSVTPVLNLNVPVGSLRGSSK--FGLGQ 841
QSLERSSSSPS+FNGGPR K++GME RSYSANV VTPV LNVPV SLRGSS+ FG GQ
Sbjct: 370 QSLERSSSSPSSFNGGPRFKHRGME-RSYSANVRVTPV--LNVPVCSLRGSSRSGFGFGQ 426
Query: 842 LFPS 853
LF S
Sbjct: 427 LFSS 430