BLASTX nr result

ID: Coptis23_contig00013406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013406
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP94147.1| 3-hydroxy-3-methylglutaryl coenzyme A reductase [...   117   1e-24
ref|XP_003545556.1| PREDICTED: 3-hydroxy-3-methylglutaryl-coenzy...   116   2e-24
ref|XP_003519474.1| PREDICTED: 3-hydroxy-3-methylglutaryl-coenzy...   116   2e-24
gb|AFN89600.1| 3-hydro-3-methylglutary CoA reductase [Gentiana m...   115   3e-24
ref|XP_004146762.1| PREDICTED: 3-hydroxy-3-methylglutaryl-coenzy...   115   5e-24

>gb|ADP94147.1| 3-hydroxy-3-methylglutaryl coenzyme A reductase [Withania
           somnifera]
          Length = 575

 Score =  117 bits (292), Expect = 1e-24
 Identities = 57/62 (91%), Positives = 61/62 (98%)
 Frame = -1

Query: 188 KASDALPLPLYLTNGIFFTLFFSVAYFLLQRWREKIRSSTPLHVVTMSEMAAILSLIASF 9
           KASDALPLPLYLTNGIFFTLFFSVAY+LL RWR+KIRSSTPLHVVT+SE+AAILSLIASF
Sbjct: 30  KASDALPLPLYLTNGIFFTLFFSVAYYLLHRWRDKIRSSTPLHVVTLSELAAILSLIASF 89

Query: 8   IY 3
           IY
Sbjct: 90  IY 91


>ref|XP_003545556.1| PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like
           [Glycine max]
          Length = 565

 Score =  116 bits (291), Expect = 2e-24
 Identities = 59/78 (75%), Positives = 65/78 (83%)
 Frame = -1

Query: 236 NNGHYPPIKQISTVDSKASDALPLPLYLTNGIFFTLFFSVAYFLLQRWREKIRSSTPLHV 57
           ++G   P K+  T   KASDALPLPLYLTN IFFTLFFSVAYFLL RWR+KIRS TPLHV
Sbjct: 12  DDGAIHPKKRRDTSSPKASDALPLPLYLTNAIFFTLFFSVAYFLLHRWRDKIRSHTPLHV 71

Query: 56  VTMSEMAAILSLIASFIY 3
           VT+SE+AAI SLIASFIY
Sbjct: 72  VTLSEIAAIFSLIASFIY 89


>ref|XP_003519474.1| PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like
           [Glycine max]
          Length = 556

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/75 (77%), Positives = 63/75 (84%)
 Frame = -1

Query: 227 HYPPIKQISTVDSKASDALPLPLYLTNGIFFTLFFSVAYFLLQRWREKIRSSTPLHVVTM 48
           H+   +  ST   KASDALPLPLYLTN IFFTLFFSVAYFLL RWR+KIRS TPLHVVT+
Sbjct: 18  HHKKRRDSSTSSPKASDALPLPLYLTNAIFFTLFFSVAYFLLHRWRDKIRSHTPLHVVTL 77

Query: 47  SEMAAILSLIASFIY 3
           SE+AAI SLIASFIY
Sbjct: 78  SEIAAIFSLIASFIY 92


>gb|AFN89600.1| 3-hydro-3-methylglutary CoA reductase [Gentiana macrophylla]
          Length = 580

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/62 (90%), Positives = 61/62 (98%)
 Frame = -1

Query: 188 KASDALPLPLYLTNGIFFTLFFSVAYFLLQRWREKIRSSTPLHVVTMSEMAAILSLIASF 9
           KASDALPLPLYLTNGIFFTLFFSVAY+LL RWR+KIR+STPLHVVT+SE+AAILSLIASF
Sbjct: 40  KASDALPLPLYLTNGIFFTLFFSVAYYLLHRWRDKIRTSTPLHVVTLSELAAILSLIASF 99

Query: 8   IY 3
           IY
Sbjct: 100 IY 101


>ref|XP_004146762.1| PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1-like
           [Cucumis sativus] gi|449527801|ref|XP_004170898.1|
           PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A
           reductase 1-like [Cucumis sativus]
          Length = 590

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/77 (72%), Positives = 65/77 (84%)
 Frame = -1

Query: 233 NGHYPPIKQISTVDSKASDALPLPLYLTNGIFFTLFFSVAYFLLQRWREKIRSSTPLHVV 54
           N   P  + + T   KASDALPLPLYLTN IFFTLFFSVAY+LL RWR+KIR+STPLHVV
Sbjct: 31  NASAPEHQHLKTASPKASDALPLPLYLTNTIFFTLFFSVAYYLLHRWRDKIRNSTPLHVV 90

Query: 53  TMSEMAAILSLIASFIY 3
           T+SE+AAI+SL+ASFIY
Sbjct: 91  TLSEIAAIVSLMASFIY 107


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