BLASTX nr result
ID: Coptis23_contig00013388
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00013388
(1477 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269706.1| PREDICTED: probable serine racemase [Vitis v... 470 e-130
ref|XP_002509781.1| Serine racemase, putative [Ricinus communis]... 464 e-128
ref|XP_004159958.1| PREDICTED: serine racemase-like [Cucumis sat... 462 e-127
ref|XP_003630530.1| Serine racemase [Medicago truncatula] gi|355... 452 e-124
gb|AFK47443.1| unknown [Medicago truncatula] 450 e-124
>ref|XP_002269706.1| PREDICTED: probable serine racemase [Vitis vinifera]
gi|297742536|emb|CBI34685.3| unnamed protein product
[Vitis vinifera]
Length = 333
Score = 470 bits (1209), Expect = e-130
Identities = 240/333 (72%), Positives = 272/333 (81%)
Frame = -3
Query: 1394 MDANKESPTEGYAADISSIIDAQVCIEPFIHRTPIMSSELLNSISGRRLFFKCECFQKCG 1215
M+A E ++ YAADISSI +AQV I FIH+TP+++SE LNS++GR LFFKCECFQK G
Sbjct: 1 MEAENEIRSKRYAADISSIREAQVRINSFIHKTPVLTSETLNSLAGRGLFFKCECFQKGG 60
Query: 1214 AFKFRGACNAIFSLEDGQAAKGVVTHSSGNHAAAVSLAAKLRGIPAYIVIPRNAPLCKVE 1035
AFKFRGACNAIFSL+D QAAKGVVTHSSGNHAAA+SLAAKLRGIPAYIVIP NAP CKVE
Sbjct: 61 AFKFRGACNAIFSLDDEQAAKGVVTHSSGNHAAALSLAAKLRGIPAYIVIPENAPRCKVE 120
Query: 1034 NVKRYGGKVFWSEATMQSRECAALKVMEETGATLIHPFNDGKIISGQGTISLEFLEQIPQ 855
NV RYGG+V WS ATMQSRE A +V++ETGA L+HP+NDG+IISGQGT+SLE LEQ PQ
Sbjct: 121 NVIRYGGQVIWSRATMQSREDIATRVLQETGAVLLHPYNDGRIISGQGTVSLELLEQAPQ 180
Query: 854 IDTIVVPISGGGLISGVALAAKSIKPSIRILAAEPRGANDAAQSKAVGRIVTLPETNTIA 675
IDTI+VPISGGGLISGVALAAKSI PSIR+ AAEP+GANDAAQSK GRI+TLPETNTIA
Sbjct: 181 IDTIMVPISGGGLISGVALAAKSINPSIRVFAAEPKGANDAAQSKNAGRIITLPETNTIA 240
Query: 674 DGLRAFLGDLTWPXXXXXXXXXXXXXXXXXIQAMRMCYEILKVVVEPSGAIGLAAVLSHS 495
DGLRA LGDLTWP I+AM++CYEILKV VEPSGAIGLAAVLS S
Sbjct: 241 DGLRASLGDLTWPVVRDLVDDIIVVEDKEIIEAMKLCYEILKVAVEPSGAIGLAAVLSDS 300
Query: 494 FQQNPAYKDCXXXXXXXXXXXVDLGVLWESYSK 396
F++NPA+K+C VDLGVLW+S K
Sbjct: 301 FKKNPAWKNCRNVGIVLSGGNVDLGVLWDSLGK 333
>ref|XP_002509781.1| Serine racemase, putative [Ricinus communis]
gi|223549680|gb|EEF51168.1| Serine racemase, putative
[Ricinus communis]
Length = 339
Score = 464 bits (1194), Expect = e-128
Identities = 233/333 (69%), Positives = 266/333 (79%)
Frame = -3
Query: 1394 MDANKESPTEGYAADISSIIDAQVCIEPFIHRTPIMSSELLNSISGRRLFFKCECFQKCG 1215
M+ TE YAADISSI +A I PFIH+TP++SSE LN++SGR+LFFKCECFQK G
Sbjct: 1 METRSRISTEKYAADISSIREAHARINPFIHKTPVLSSESLNALSGRKLFFKCECFQKGG 60
Query: 1214 AFKFRGACNAIFSLEDGQAAKGVVTHSSGNHAAAVSLAAKLRGIPAYIVIPRNAPLCKVE 1035
AFKFRGACNAIFSL+D Q AKGVVTHSSGNHAAA+SLAAKLRGIPAYIV+P+ AP CKVE
Sbjct: 61 AFKFRGACNAIFSLDDDQTAKGVVTHSSGNHAAALSLAAKLRGIPAYIVVPKTAPRCKVE 120
Query: 1034 NVKRYGGKVFWSEATMQSRECAALKVMEETGATLIHPFNDGKIISGQGTISLEFLEQIPQ 855
NV RYGG+V WSE ++ SRE A KV++ETGA LIHP+ND +IISGQGTISLE LEQ PQ
Sbjct: 121 NVIRYGGQVIWSEPSLHSRESVATKVVQETGAVLIHPYNDRRIISGQGTISLELLEQAPQ 180
Query: 854 IDTIVVPISGGGLISGVALAAKSIKPSIRILAAEPRGANDAAQSKAVGRIVTLPETNTIA 675
IDTI+VPISGGGLISGVALAAKSI PSIRILAAEP+GANDAAQSKA G I+TLPETNTIA
Sbjct: 181 IDTIIVPISGGGLISGVALAAKSINPSIRILAAEPKGANDAAQSKAAGEIITLPETNTIA 240
Query: 674 DGLRAFLGDLTWPXXXXXXXXXXXXXXXXXIQAMRMCYEILKVVVEPSGAIGLAAVLSHS 495
DGLRA LG LTWP ++AM++CYEILKV +EPSG IGLAA+LS S
Sbjct: 241 DGLRASLGSLTWPVVRDLVDDVITLEDNEIVEAMKLCYEILKVAIEPSGVIGLAAILSDS 300
Query: 494 FQQNPAYKDCXXXXXXXXXXXVDLGVLWESYSK 396
FQ+NP +KDC VDLGV+W+S+ K
Sbjct: 301 FQKNPNWKDCSNIGIILSGGNVDLGVIWDSFRK 333
>ref|XP_004159958.1| PREDICTED: serine racemase-like [Cucumis sativus]
Length = 333
Score = 462 bits (1189), Expect = e-127
Identities = 227/333 (68%), Positives = 273/333 (81%)
Frame = -3
Query: 1394 MDANKESPTEGYAADISSIIDAQVCIEPFIHRTPIMSSELLNSISGRRLFFKCECFQKCG 1215
M+ ++ + YAADISSI +A++ I PFIH+TP+ SSE +N+ SG++LFFKCECFQK G
Sbjct: 1 MNVESQNKKKEYAADISSIKEARIRIRPFIHQTPVFSSETINAASGKQLFFKCECFQKGG 60
Query: 1214 AFKFRGACNAIFSLEDGQAAKGVVTHSSGNHAAAVSLAAKLRGIPAYIVIPRNAPLCKVE 1035
AFKFRGACNAI+SL++G+AAKGVVTHSSGNHAAA+SLAAKLRGIPAYIVIP NAP CKVE
Sbjct: 61 AFKFRGACNAIYSLDEGEAAKGVVTHSSGNHAAALSLAAKLRGIPAYIVIPENAPKCKVE 120
Query: 1034 NVKRYGGKVFWSEATMQSRECAALKVMEETGATLIHPFNDGKIISGQGTISLEFLEQIPQ 855
NV RYGG++ WS++ +QSRE A +VM+ETGA LIHP+NDG+IISGQGTISLE LEQ+PQ
Sbjct: 121 NVIRYGGQIIWSKSAIQSRESVAARVMQETGALLIHPYNDGRIISGQGTISLELLEQVPQ 180
Query: 854 IDTIVVPISGGGLISGVALAAKSIKPSIRILAAEPRGANDAAQSKAVGRIVTLPETNTIA 675
+DT++VPISGGGLISG+++AAK+I P+IRI AAEP+GANDAA SKA G+IVTLPET TIA
Sbjct: 181 LDTLIVPISGGGLISGISVAAKAINPAIRIFAAEPKGANDAAMSKAAGKIVTLPETTTIA 240
Query: 674 DGLRAFLGDLTWPXXXXXXXXXXXXXXXXXIQAMRMCYEILKVVVEPSGAIGLAAVLSHS 495
DGLRAFLG+LTWP ++AMR+C EILKVVVEPSGAIGLAAVLS S
Sbjct: 241 DGLRAFLGNLTWPIVRDLVDDVITVEDTEIVEAMRLCLEILKVVVEPSGAIGLAAVLSDS 300
Query: 494 FQQNPAYKDCXXXXXXXXXXXVDLGVLWESYSK 396
F+QNP++KDC VDLG+LW SY K
Sbjct: 301 FKQNPSWKDCNSIGIILSGGNVDLGMLWNSYKK 333
>ref|XP_003630530.1| Serine racemase [Medicago truncatula] gi|355524552|gb|AET05006.1|
Serine racemase [Medicago truncatula]
Length = 333
Score = 452 bits (1163), Expect = e-124
Identities = 228/333 (68%), Positives = 267/333 (80%)
Frame = -3
Query: 1394 MDANKESPTEGYAADISSIIDAQVCIEPFIHRTPIMSSELLNSISGRRLFFKCECFQKCG 1215
M+ + P YAADISSI +A I+ I +TP++SS LN+ISGR+L+FKCE FQK G
Sbjct: 1 MEEESQIPKGRYAADISSINEAHARIKSLILKTPVLSSTSLNAISGRQLYFKCESFQKGG 60
Query: 1214 AFKFRGACNAIFSLEDGQAAKGVVTHSSGNHAAAVSLAAKLRGIPAYIVIPRNAPLCKVE 1035
AFKFRGACNA+FSL D A+KGV+THSSGNHAAA++LAAKLRGIPAYIVIP+NAP CK+E
Sbjct: 61 AFKFRGACNAVFSLNDEDASKGVITHSSGNHAAALALAAKLRGIPAYIVIPKNAPTCKIE 120
Query: 1034 NVKRYGGKVFWSEATMQSRECAALKVMEETGATLIHPFNDGKIISGQGTISLEFLEQIPQ 855
NVKRYGG+V WSEA M+SRE A KV +ETGA IHP+NDG+I+SGQGTISLE LEQ PQ
Sbjct: 121 NVKRYGGQVIWSEANMRSREETANKVWQETGAIFIHPYNDGRILSGQGTISLELLEQAPQ 180
Query: 854 IDTIVVPISGGGLISGVALAAKSIKPSIRILAAEPRGANDAAQSKAVGRIVTLPETNTIA 675
+DT+VVPISGGGLISGVALAAKSI P+IRILAAEP+GA+DAAQSKA GRI+TLPETNTIA
Sbjct: 181 LDTLVVPISGGGLISGVALAAKSINPAIRILAAEPKGADDAAQSKAAGRIITLPETNTIA 240
Query: 674 DGLRAFLGDLTWPXXXXXXXXXXXXXXXXXIQAMRMCYEILKVVVEPSGAIGLAAVLSHS 495
DGLRAFLGD TWP ++AM++CYEILK+VVEPSGAIGLAAVLS S
Sbjct: 241 DGLRAFLGDFTWPVVRDLVDDIITVEDSEIVKAMQLCYEILKIVVEPSGAIGLAAVLSES 300
Query: 494 FQQNPAYKDCXXXXXXXXXXXVDLGVLWESYSK 396
FQ+NPA+KDC VD+ VLW+S +K
Sbjct: 301 FQKNPAWKDCKHIGIVVSGGNVDMAVLWDSLNK 333
>gb|AFK47443.1| unknown [Medicago truncatula]
Length = 333
Score = 450 bits (1157), Expect = e-124
Identities = 227/333 (68%), Positives = 266/333 (79%)
Frame = -3
Query: 1394 MDANKESPTEGYAADISSIIDAQVCIEPFIHRTPIMSSELLNSISGRRLFFKCECFQKCG 1215
M+ + P YAADISSI +A I+ I +TP++SS LN+ISGR+L+FKCE FQK G
Sbjct: 1 MEEESQIPKGRYAADISSINEAHARIKSLILKTPVLSSTSLNAISGRQLYFKCESFQKGG 60
Query: 1214 AFKFRGACNAIFSLEDGQAAKGVVTHSSGNHAAAVSLAAKLRGIPAYIVIPRNAPLCKVE 1035
AFKFRGACNA+FSL D A+KGV+THSSGNHAAA++LAAKLRGIPAYIVIP+NAP CK+E
Sbjct: 61 AFKFRGACNAVFSLNDEDASKGVITHSSGNHAAALALAAKLRGIPAYIVIPKNAPTCKIE 120
Query: 1034 NVKRYGGKVFWSEATMQSRECAALKVMEETGATLIHPFNDGKIISGQGTISLEFLEQIPQ 855
NVKRYGG+V WSEA M+SRE A KV +ETGA IHP+NDG+I+SGQGTISLE LEQ PQ
Sbjct: 121 NVKRYGGQVIWSEANMRSREETANKVWQETGAIFIHPYNDGRILSGQGTISLELLEQAPQ 180
Query: 854 IDTIVVPISGGGLISGVALAAKSIKPSIRILAAEPRGANDAAQSKAVGRIVTLPETNTIA 675
+DT+VVPISGGGLISGVALAAKSI P+IRILAAEP+GA+DAAQ KA GRI+TLPETNTIA
Sbjct: 181 LDTLVVPISGGGLISGVALAAKSINPAIRILAAEPKGADDAAQFKAAGRIITLPETNTIA 240
Query: 674 DGLRAFLGDLTWPXXXXXXXXXXXXXXXXXIQAMRMCYEILKVVVEPSGAIGLAAVLSHS 495
DGLRAFLGD TWP ++AM++CYEILK+VVEPSGAIGLAAVLS S
Sbjct: 241 DGLRAFLGDFTWPVVRDLVDDIITVEDSEIVKAMQLCYEILKIVVEPSGAIGLAAVLSES 300
Query: 494 FQQNPAYKDCXXXXXXXXXXXVDLGVLWESYSK 396
FQ+NPA+KDC VD+ VLW+S +K
Sbjct: 301 FQKNPAWKDCKHIGIVVSGGNVDMAVLWDSLNK 333