BLASTX nr result

ID: Coptis23_contig00013381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013381
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF06616.1| Toc34-2 protein [Elaeis guineensis]                     99   4e-19
gb|AAM65983.1| GTP-binding protein [Arabidopsis thaliana]              91   9e-17
ref|NP_196119.1| translocase of chloroplast 34 [Arabidopsis thal...    91   9e-17
ref|XP_002873181.1| ATTOC34/OEP34 [Arabidopsis lyrata subsp. lyr...    91   9e-17
dbj|BAH20396.1| AT5G05000 [Arabidopsis thaliana]                       91   9e-17

>gb|ACF06616.1| Toc34-2 protein [Elaeis guineensis]
          Length = 312

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/64 (75%), Positives = 52/64 (81%)
 Frame = +2

Query: 2   ILVDKKLIDGPNPNERHKFLIPLILAFQYFFIVKPIQRAIKHDIFKESKPSWELRDVGQA 181
           I VD+KLIDGPNPN R K  IPL+LAFQ FF VKPIQ+AIKHD+ KESKP WELRDVG A
Sbjct: 249 ITVDQKLIDGPNPNARGKLFIPLLLAFQDFFRVKPIQKAIKHDMAKESKPLWELRDVGLA 308

Query: 182 GRRF 193
            R F
Sbjct: 309 NRNF 312


>gb|AAM65983.1| GTP-binding protein [Arabidopsis thaliana]
          Length = 313

 Score = 91.3 bits (225), Expect = 9e-17
 Identities = 42/63 (66%), Positives = 51/63 (80%)
 Frame = +2

Query: 2   ILVDKKLIDGPNPNERHKFLIPLILAFQYFFIVKPIQRAIKHDIFKESKPSWELRDVGQA 181
           I VDKKL++GPNPNER K LIPL+ AFQY  ++KP+ RAIK D+ +ESKP+WELRD G A
Sbjct: 250 IHVDKKLVEGPNPNERGKKLIPLMFAFQYLLVMKPLVRAIKSDVSRESKPAWELRDSGLA 309

Query: 182 GRR 190
            RR
Sbjct: 310 SRR 312


>ref|NP_196119.1| translocase of chloroplast 34 [Arabidopsis thaliana]
           gi|30680751|ref|NP_850768.1| translocase of chloroplast
           34 [Arabidopsis thaliana] gi|42573271|ref|NP_974732.1|
           translocase of chloroplast 34 [Arabidopsis thaliana]
           gi|166897637|sp|Q38906.2|TOC34_ARATH RecName:
           Full=Translocase of chloroplast 34, chloroplastic;
           Short=AtToc34; AltName: Full=34 kDa chloroplast outer
           envelope protein; AltName: Full=GTP-binding protein
           OEP34; AltName: Full=Plastid protein import 3
           gi|10178039|dbj|BAB11522.1| GTP-binding protein
           [Arabidopsis thaliana] gi|110738722|dbj|BAF01285.1|
           GTP-binding protein [Arabidopsis thaliana]
           gi|199589346|gb|ACH90464.1| At5g05000 [Arabidopsis
           thaliana] gi|332003431|gb|AED90814.1| translocase of
           chloroplast 34 [Arabidopsis thaliana]
           gi|332003432|gb|AED90815.1| translocase of chloroplast
           34 [Arabidopsis thaliana] gi|332003433|gb|AED90816.1|
           translocase of chloroplast 34 [Arabidopsis thaliana]
          Length = 313

 Score = 91.3 bits (225), Expect = 9e-17
 Identities = 42/63 (66%), Positives = 51/63 (80%)
 Frame = +2

Query: 2   ILVDKKLIDGPNPNERHKFLIPLILAFQYFFIVKPIQRAIKHDIFKESKPSWELRDVGQA 181
           I VDKKL++GPNPNER K LIPL+ AFQY  ++KP+ RAIK D+ +ESKP+WELRD G A
Sbjct: 250 IHVDKKLVEGPNPNERGKKLIPLMFAFQYLLVMKPLVRAIKSDVSRESKPAWELRDSGLA 309

Query: 182 GRR 190
            RR
Sbjct: 310 SRR 312


>ref|XP_002873181.1| ATTOC34/OEP34 [Arabidopsis lyrata subsp. lyrata]
           gi|297319018|gb|EFH49440.1| ATTOC34/OEP34 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 313

 Score = 91.3 bits (225), Expect = 9e-17
 Identities = 42/63 (66%), Positives = 51/63 (80%)
 Frame = +2

Query: 2   ILVDKKLIDGPNPNERHKFLIPLILAFQYFFIVKPIQRAIKHDIFKESKPSWELRDVGQA 181
           I VDKKL++GPNPN+R K LIPLI AFQY  ++KP+ RAIK D+ +ESKP+WELRD G A
Sbjct: 250 IHVDKKLVEGPNPNQRGKRLIPLIFAFQYLLVMKPLVRAIKSDVTRESKPAWELRDSGLA 309

Query: 182 GRR 190
            RR
Sbjct: 310 SRR 312


>dbj|BAH20396.1| AT5G05000 [Arabidopsis thaliana]
          Length = 246

 Score = 91.3 bits (225), Expect = 9e-17
 Identities = 42/63 (66%), Positives = 51/63 (80%)
 Frame = +2

Query: 2   ILVDKKLIDGPNPNERHKFLIPLILAFQYFFIVKPIQRAIKHDIFKESKPSWELRDVGQA 181
           I VDKKL++GPNPNER K LIPL+ AFQY  ++KP+ RAIK D+ +ESKP+WELRD G A
Sbjct: 183 IHVDKKLVEGPNPNERGKKLIPLMFAFQYLLVMKPLVRAIKSDVSRESKPAWELRDSGLA 242

Query: 182 GRR 190
            RR
Sbjct: 243 SRR 245


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