BLASTX nr result

ID: Coptis23_contig00013361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013361
         (1179 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330559.1| predicted protein [Populus trichocarpa] gi|2...   134   3e-29
ref|XP_002523168.1| ATP binding protein, putative [Ricinus commu...   134   6e-29
emb|CAN64247.1| hypothetical protein VITISV_039945 [Vitis vinifera]   121   3e-25
ref|XP_004158097.1| PREDICTED: uncharacterized protein LOC101227...   117   6e-24
ref|XP_004135726.1| PREDICTED: uncharacterized protein LOC101214...   117   6e-24

>ref|XP_002330559.1| predicted protein [Populus trichocarpa] gi|222872117|gb|EEF09248.1|
            predicted protein [Populus trichocarpa]
          Length = 1681

 Score =  134 bits (338), Expect = 3e-29
 Identities = 75/177 (42%), Positives = 115/177 (64%), Gaps = 5/177 (2%)
 Frame = -1

Query: 1161 IGCDSPGSLNKYGWLDTSQSDSIPHH----VSDILSLVELLACYMSWEWTRSKIIPHLVK 994
            + CD+  SL K   +  ++S+SI +     +SD+LSLVELLAC MSWEWT SKIIP L++
Sbjct: 1501 MNCDTSCSLKKC--VMPARSNSIMNETLCGLSDLLSLVELLACNMSWEWTCSKIIPELLE 1558

Query: 993  ILESSVSEKFSSAVILVIGQLGRFGIDDSGCEQLGVEQLRCRLAVLFNEKTKTNCGLLMQ 814
            +LE +  + F++AV++++GQLGR G+   G E  GVE LRC+L+   +        L +Q
Sbjct: 1559 MLERTKLDNFAAAVLILLGQLGRLGVSAFGYEDNGVENLRCKLSGFLSRDATIRMALPVQ 1618

Query: 813  LSLVRALIDLLYVNFEDLVTKED-IPVAAGRRVHANLIRTWFSQLSKEQKSLSFGIL 646
            ++L  AL+ LL ++FE L+     +P  + + V  + IR+WFS L+KEQ++LS  +L
Sbjct: 1619 IALATALLGLLSLDFEKLIQSNSCLPAMSRQSVSIDHIRSWFSSLTKEQQALSLSLL 1675


>ref|XP_002523168.1| ATP binding protein, putative [Ricinus communis]
            gi|223537575|gb|EEF39199.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1548

 Score =  134 bits (336), Expect = 6e-29
 Identities = 68/152 (44%), Positives = 106/152 (69%), Gaps = 1/152 (0%)
 Frame = -1

Query: 1083 VSDILSLVELLACYMSWEWTRSKIIPHLVKILESSVSEKFSSAVILVIGQLGRFGIDDSG 904
            +SD+LSLVEL+ACYMSWEWT  +IIP L++ILE  + + F+ AV+L++GQLGRFG+   G
Sbjct: 1394 LSDVLSLVELIACYMSWEWTCGRIIPVLLEILERPMVDDFAVAVVLLLGQLGRFGVAACG 1453

Query: 903  CEQLGVEQLRCRLAVLFNEKTKTNCGLLMQLSLVRALIDLLYVNFEDLVTKE-DIPVAAG 727
             E   VE L+ +L     + T +   L +Q++ V +++ LL ++F+D+V  +  +P  A 
Sbjct: 1454 REDKEVESLKSKLFGFLWQNTTSRSSLPVQIATVTSILGLLRLDFKDVVQSDLKLPKVAS 1513

Query: 726  RRVHANLIRTWFSQLSKEQKSLSFGILQPAGM 631
            + V+ +L+R WFS LSKEQ++LS+ +LQ A +
Sbjct: 1514 QSVYIDLLRKWFSILSKEQQNLSYSLLQSAAI 1545


>emb|CAN64247.1| hypothetical protein VITISV_039945 [Vitis vinifera]
          Length = 441

 Score =  121 bits (304), Expect = 3e-25
 Identities = 77/193 (39%), Positives = 109/193 (56%), Gaps = 9/193 (4%)
 Frame = -1

Query: 1173 AFC--GIGCDSPGSLNKYGWLDTSQSDSIPH----HVSDILSLVELLACYMSWEWTRSKI 1012
            AFC   + CD P   N +  +   QS S  +    H  DILSLVEL+A  MSWEWT  K+
Sbjct: 233  AFCVHSMKCDMPCCFNDFV-MPAIQSGSDFNRTLCHFIDILSLVELVASSMSWEWTCBKV 291

Query: 1011 IPHLVKILESSVSEKFSSAVILVIGQLGRFGIDDSGCEQLGVEQLRCRL-AVLFNEKTKT 835
            +P L+K+L     +  S+A+++++GQLGR G+D  G E  GVE +RC L + L N  T+ 
Sbjct: 292  VPRLLKMLNLCDMDDTSAAIVILLGQLGRIGVDAGGYEDTGVETVRCGLYSYLCNIITRK 351

Query: 834  NCGLLMQLSLVRALIDLLYVNFEDLVTK--EDIPVAAGRRVHANLIRTWFSQLSKEQKSL 661
             C L + +S + AL+ LL V  ++ V     D+P         + IR WFS LSKEQ+S 
Sbjct: 352  TC-LPLHISTITALLGLLSVELKEFVQTGVVDLPDVTSESALVHDIRNWFSSLSKEQQSF 410

Query: 660  SFGILQPAGMHGN 622
            S  ++Q   +H N
Sbjct: 411  SVSLIQSFDIHKN 423


>ref|XP_004158097.1| PREDICTED: uncharacterized protein LOC101227196 [Cucumis sativus]
          Length = 1589

 Score =  117 bits (293), Expect = 6e-24
 Identities = 73/182 (40%), Positives = 101/182 (55%), Gaps = 9/182 (4%)
 Frame = -1

Query: 1161 IGCDSPGSLNKYGWLDTSQSDSIPHH--------VSDILSLVELLACYMSWEWTRSKIIP 1006
            + CD+   L K+       SD  PH         V D +SLVELLACYMSW WT + II 
Sbjct: 1408 LDCDASFYLKKF-----KVSDDEPHFLFNPSLSDVIDTISLVELLACYMSWNWTFANIIS 1462

Query: 1005 HLVKILESSVSEKFSSAVILVIGQLGRFGIDDSGCEQLGVEQLRCRLAVLFNEKTKTNCG 826
             L+ +++SS  + F  A+++++GQLGR G+D  G +  GV+ LR  L+      T    G
Sbjct: 1463 QLMDLMKSSAKKGF--AIVVLLGQLGRLGVDAGGFDDGGVKILRSNLSAFLCLDTTIKSG 1520

Query: 825  LLMQLSLVRALIDLLYVNFEDLV-TKEDIPVAAGRRVHANLIRTWFSQLSKEQKSLSFGI 649
            L +Q++ V AL+ LL  +FE +V  K      +      NLI+TWFS LS +QK LS  I
Sbjct: 1521 LCVQIATVSALLGLLPFDFETIVQDKVSYLATSSHYAEVNLIKTWFSLLSPKQKELSRNI 1580

Query: 648  LQ 643
            LQ
Sbjct: 1581 LQ 1582


>ref|XP_004135726.1| PREDICTED: uncharacterized protein LOC101214300 [Cucumis sativus]
          Length = 1858

 Score =  117 bits (293), Expect = 6e-24
 Identities = 73/182 (40%), Positives = 101/182 (55%), Gaps = 9/182 (4%)
 Frame = -1

Query: 1161 IGCDSPGSLNKYGWLDTSQSDSIPHH--------VSDILSLVELLACYMSWEWTRSKIIP 1006
            + CD+   L K+       SD  PH         V D +SLVELLACYMSW WT + II 
Sbjct: 1677 LDCDASFYLKKF-----KVSDDEPHFLFNPSLSDVIDTISLVELLACYMSWNWTFANIIS 1731

Query: 1005 HLVKILESSVSEKFSSAVILVIGQLGRFGIDDSGCEQLGVEQLRCRLAVLFNEKTKTNCG 826
             L+ +++SS  + F  A+++++GQLGR G+D  G +  GV+ LR  L+      T    G
Sbjct: 1732 QLMDLMKSSAKKGF--AIVVLLGQLGRLGVDAGGFDDGGVKILRSNLSAFLCLDTTIKSG 1789

Query: 825  LLMQLSLVRALIDLLYVNFEDLV-TKEDIPVAAGRRVHANLIRTWFSQLSKEQKSLSFGI 649
            L +Q++ V AL+ LL  +FE +V  K      +      NLI+TWFS LS +QK LS  I
Sbjct: 1790 LCVQIATVSALLGLLPFDFETIVQDKVSYLATSSHYAEVNLIKTWFSLLSPKQKELSRNI 1849

Query: 648  LQ 643
            LQ
Sbjct: 1850 LQ 1851


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