BLASTX nr result

ID: Coptis23_contig00013354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013354
         (906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30297.3| unnamed protein product [Vitis vinifera]              188   2e-45
emb|CAN62761.1| hypothetical protein VITISV_021811 [Vitis vinifera]   184   2e-44
ref|XP_002528749.1| conserved hypothetical protein [Ricinus comm...   156   5e-36
ref|XP_002305863.1| predicted protein [Populus trichocarpa] gi|2...   148   1e-33
ref|XP_002301703.1| predicted protein [Populus trichocarpa] gi|2...   143   6e-32

>emb|CBI30297.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  188 bits (477), Expect = 2e-45
 Identities = 112/254 (44%), Positives = 155/254 (61%), Gaps = 17/254 (6%)
 Frame = -2

Query: 905 VTLSA----SNVREDVISRHRHFIRAIQDQVFQVGK-------GVSERNTHLINLNEKDQ 759
           V+LSA    S +REDVISRH+ FIRAI++Q+  V K       G S RNT  INLNE+D+
Sbjct: 79  VSLSAATDKSRMREDVISRHKQFIRAIREQIVHVEKSLLDSSMGNSVRNTEWINLNEQDR 138

Query: 758 DGLALFLSGGNPVDPLTEYDS-DSSVMRRFLDSTKPSGFND---EIIELRTEEIEDPREN 591
           DGLALFLSG +P + +  Y+  DS+++RRFLD    S +ND   EI+E +T E E+    
Sbjct: 139 DGLALFLSGQDPTEQVPRYEKEDSTILRRFLDPVTTSSYNDSTDEIVEQKTRESENLNMA 198

Query: 590 GVMHIDHSFDNIKENKLRKVASNYFTRPGFETVISIQDSSKNTQG--GSWELENPDSNAK 417
             MH+DH F + KE KLR V S+Y  +  FE   ++QD++    G  GSW+LE   +  K
Sbjct: 199 RAMHVDHDFKSSKEGKLRNVGSHYPAQLSFEAPEALQDTAGGKHGGDGSWDLEADGAKDK 258

Query: 416 SIFSKNKLRGSHSRLDVFSFLGNMWYAYGDKMAKSFAKRRKDGEVIGDFDQNPSSSYADI 237
           S F K+  RG H+R+ +F FL N+W AYG +++++F KR KDGE     +Q+ S S  D+
Sbjct: 259 SFFHKDG-RGYHNRMGIFCFLANLWPAYGSRVSRNFTKRLKDGE-----EQSHSPSQMDV 312

Query: 236 LQAEQGTYSWMGFA 195
                G  + M  A
Sbjct: 313 SHGAPGHQARMRLA 326


>emb|CAN62761.1| hypothetical protein VITISV_021811 [Vitis vinifera]
          Length = 346

 Score =  184 bits (467), Expect = 2e-44
 Identities = 108/240 (45%), Positives = 150/240 (62%), Gaps = 17/240 (7%)
 Frame = -2

Query: 905 VTLSA----SNVREDVISRHRHFIRAIQDQVFQVGK-------GVSERNTHLINLNEKDQ 759
           V+LSA    S +REDVISRH+ FIRAI++Q+  V K       G S RNT  INLNE+D+
Sbjct: 79  VSLSAATDKSRMREDVISRHKQFIRAIREQIVHVEKSLLDSSMGNSVRNTEWINLNEQDR 138

Query: 758 DGLALFLSGGNPVDPLTEYD-SDSSVMRRFLDSTKPSGFN---DEIIELRTEEIEDPREN 591
           DGLALFLSG +P + +  Y+  DS+++RRFLD    S +N   DEI+E +T E E+    
Sbjct: 139 DGLALFLSGQDPTEQVPRYEKEDSTILRRFLDPVTTSSYNDSTDEIVEQKTRESENLNMA 198

Query: 590 GVMHIDHSFDNIKENKLRKVASNYFTRPGFETVISIQDSSKNTQGG--SWELENPDSNAK 417
             MH+DH F + KE KLR V S+Y  +  FE   ++ D++    GG  SW+LE   +  K
Sbjct: 199 RAMHVDHDFKSSKEGKLRNVGSHYPAQLSFEAPEALXDTAGGKHGGDXSWDLEADGAKDK 258

Query: 416 SIFSKNKLRGSHSRLDVFSFLGNMWYAYGDKMAKSFAKRRKDGEVIGDFDQNPSSSYADI 237
           S F K+  RG H+R+ +F FL N+W AYG +++++F KR KDGE     +Q+ S S  D+
Sbjct: 259 SFFHKDG-RGYHNRMGIFCFLANLWPAYGSRVSRNFTKRLKDGE-----EQSHSPSQMDV 312


>ref|XP_002528749.1| conserved hypothetical protein [Ricinus communis]
           gi|223531843|gb|EEF33661.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 380

 Score =  156 bits (395), Expect = 5e-36
 Identities = 101/237 (42%), Positives = 138/237 (58%), Gaps = 11/237 (4%)
 Frame = -2

Query: 890 SNVREDVISRHRHFIRAIQDQVFQVGKGV-------SERNTHLINLNEKDQDGLALFLSG 732
           S  REDVISRHR FIRAI++QV  V   V       S RNT   NLNE+D+DGLALFL G
Sbjct: 88  SRSREDVISRHRQFIRAIREQVNHVENSVAGPALGDSMRNTEWGNLNEQDRDGLALFLIG 147

Query: 731 GNPVDPLTEYD-SDSSVMRRFLDSTKPSGFND-EIIELRTEEIEDPRENGVMHIDHSFDN 558
           GN       Y+  DSS++RRFLD T  S   D EI+E  + E E  + +G +  D S   
Sbjct: 148 GNTAGHSNHYEMEDSSILRRFLDPTSASSLTDNEIVEHGSVEFEKLKLSGNVQADDSAS- 206

Query: 557 IKENKLRKVASNYFTRPGFETVISIQDSSKNT--QGGSWELENPDSNAKSIFSKNKLRGS 384
            K++  +K+ S+Y TR G +    +QD S N    GG W+LE  ++  K++F +N  R  
Sbjct: 207 -KDDYFKKLGSHYTTRLGSD----LQDISCNRPGDGGHWDLEADEATPKNVFHENSSR-- 259

Query: 383 HSRLDVFSFLGNMWYAYGDKMAKSFAKRRKDGEVIGDFDQNPSSSYADILQAEQGTY 213
           +SR++ F FL N+W  +G K+ KS+ KR KDGE     +Q  S +Y D+  + QG +
Sbjct: 260 YSRMNFFGFLNNLWKMWGTKVTKSYIKRLKDGE-----EQRHSPTYIDVSYSAQGQH 311


>ref|XP_002305863.1| predicted protein [Populus trichocarpa] gi|222848827|gb|EEE86374.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  148 bits (374), Expect = 1e-33
 Identities = 87/218 (39%), Positives = 133/218 (61%), Gaps = 11/218 (5%)
 Frame = -2

Query: 905 VTLSASNVREDVISRHRHFIRAIQDQVFQVGKGV-------SERNTHLINLNEKDQDGLA 747
           +  + S  REDVISRHR FI AI++ + +V KGV       S RN+  +NLN+ ++D LA
Sbjct: 83  IIANKSQTREDVISRHRQFIMAIREHINEVEKGVKGPSMGDSMRNSEWVNLNDHERDLLA 142

Query: 746 LFLSGGNPVDPLTEYD-SDSSVMRRFLDSTKPSGFND-EIIELRTEEIEDPRENGVMHID 573
            FL+GGNP + L  Y+  +S  +RRFLD    S   D EI+E  + E E  R NGV H +
Sbjct: 143 SFLTGGNPKEHLNHYEMEESGYLRRFLDPNLGSSLTDNEIVEHDSREFERVRINGVGHAE 202

Query: 572 HSFDNIKENKLRKVASNYFTRPGFETVISIQDSSKNTQGGS--WELENPDSNAKSIFSKN 399
           H  D+  E+K R + S+Y TR G + + S+ ++S    GG   W+L+  ++ ++S F + 
Sbjct: 203 HYLDSANEDK-RNIGSHYTTRLGSDMMNSLPENSHERHGGGDHWDLKANEAKSRSFFHEI 261

Query: 398 KLRGSHSRLDVFSFLGNMWYAYGDKMAKSFAKRRKDGE 285
           K RG++S +  F FL N+W  + +++A+++ KR KDGE
Sbjct: 262 KSRGTYS-IMFFGFLINLWSTHRNRIARNYTKRLKDGE 298


>ref|XP_002301703.1| predicted protein [Populus trichocarpa] gi|222843429|gb|EEE80976.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  143 bits (360), Expect = 6e-32
 Identities = 89/235 (37%), Positives = 135/235 (57%), Gaps = 11/235 (4%)
 Frame = -2

Query: 890 SNVREDVISRHRHFIRAIQDQVFQVGKGV-------SERNTHLINLNEKDQDGLALFLSG 732
           S  REDVISRHR FI AI++ + +V K V       S RN+  +NLN++D+D LA FL+G
Sbjct: 88  SQAREDVISRHRQFIIAIREHINEVEKSVKGRSMDDSMRNSEWVNLNDQDRDVLASFLTG 147

Query: 731 GNPVDPLTEYD-SDSSVMRRFLDSTKPSGFND-EIIELRTEEIEDPRENGVMHIDHSFDN 558
           GNP + +  Y+  +SS++RRFLD        D EI+E  + E E  +  GV H DH  D+
Sbjct: 148 GNPTENMHPYEMEESSILRRFLDPNSGVSLKDNEIVEHDSREFERVKMTGVGHADHYLDS 207

Query: 557 IKENKLRKVASNYFTRPGFETVISIQDSSKNTQGGS--WELENPDSNAKSIFSKNKLRGS 384
             E+K R VAS+  T  G + + S Q+   +   G   W+LE  ++ ++S F + K RG 
Sbjct: 208 ANEDK-RNVASHNSTGLGSDMMNSRQEIHHDRHVGDDHWDLEANEAKSRSFFHEIKSRGI 266

Query: 383 HSRLDVFSFLGNMWYAYGDKMAKSFAKRRKDGEVIGDFDQNPSSSYADILQAEQG 219
           +S +  F FL N+W A+ +++ +++ KR KDGE     +   S +Y +   + QG
Sbjct: 267 YSIMIFFGFLSNLWTAHRNRVGRNYTKRLKDGE-----EYRHSPTYTESSHSAQG 316


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