BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013339
         (877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889401.1| cytochrome c oxidase assembly protein CtaG [...   325   1e-86
ref|NP_171743.1| cytochrome c oxidase assembly protein CtaG / Co...   324   2e-86
gb|AAG00893.1|AC064879_11 Similar to cytochrome-c oxidase assemb...   322   9e-86
ref|XP_003553055.1| PREDICTED: cytochrome c oxidase assembly pro...   319   5e-85
ref|XP_004146871.1| PREDICTED: cytochrome c oxidase assembly pro...   317   2e-84

>ref|XP_002889401.1| cytochrome c oxidase assembly protein CtaG [Arabidopsis lyrata
           subsp. lyrata] gi|297335243|gb|EFH65660.1| cytochrome c
           oxidase assembly protein CtaG [Arabidopsis lyrata subsp.
           lyrata]
          Length = 287

 Score =  325 bits (832), Expect = 1e-86
 Identities = 160/208 (76%), Positives = 179/208 (86%)
 Frame = +2

Query: 227 SKSLIWRNYSYVSSSSTQERKSRKMLWWLVGLGCGMVGLTYASVPLYRTFCQVTGYGGTV 406
           +KS++   +   S+ S  E KS+KML++L  +  GMVGLTYA+VPLYRTFCQ TGYGGTV
Sbjct: 69  AKSMLVSAHRQYSTQSPTETKSQKMLYYLTAVVFGMVGLTYAAVPLYRTFCQATGYGGTV 128

Query: 407 QRRETVEEKIARHAQGGTKPTREIVVQFNADVADGMQWKFIPTQREVKVKPGESALAFYT 586
           QR+ETVEEKIARH++ GT   REIVVQFNADVADGMQWKF PTQREV+VKPGESALAFYT
Sbjct: 129 QRKETVEEKIARHSESGTVTEREIVVQFNADVADGMQWKFTPTQREVRVKPGESALAFYT 188

Query: 587 AENRSSTPITGVSTYNVTPMKAGKYFNKIQCFCFEEQCLLPGEQIDMPVFFYIDPEIETD 766
           AEN+SS PITGVSTYNVTPMKAG YFNKIQCFCFEEQ LLPGEQIDMPVFFYIDPE ETD
Sbjct: 189 AENKSSAPITGVSTYNVTPMKAGVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETD 248

Query: 767 PNMDGVNNLILSYTFFKVPDK*SFTDLV 850
           P MDG+NNLILSYTFFKV ++ + TD V
Sbjct: 249 PRMDGINNLILSYTFFKVSEE-NTTDTV 275


>ref|NP_171743.1| cytochrome c oxidase assembly protein CtaG / Cox11 [Arabidopsis
           thaliana] gi|75151034|sp|Q8GWR0.1|COX11_ARATH RecName:
           Full=Cytochrome c oxidase assembly protein COX11,
           mitochondrial; Flags: Precursor
           gi|26452392|dbj|BAC43281.1| unknown protein [Arabidopsis
           thaliana] gi|28950841|gb|AAO63344.1| At1g02410
           [Arabidopsis thaliana] gi|332189306|gb|AEE27427.1|
           cytochrome c oxidase assembly protein CtaG / Cox11
           [Arabidopsis thaliana]
          Length = 287

 Score =  324 bits (830), Expect = 2e-86
 Identities = 157/201 (78%), Positives = 175/201 (87%)
 Frame = +2

Query: 227 SKSLIWRNYSYVSSSSTQERKSRKMLWWLVGLGCGMVGLTYASVPLYRTFCQVTGYGGTV 406
           +KS++   +   S+ S  E KS+KML++L  +  GMVGLTYA+VPLYRTFCQ TGYGGTV
Sbjct: 69  AKSMLDSAHRQYSTHSPSETKSQKMLYYLTAVVFGMVGLTYAAVPLYRTFCQATGYGGTV 128

Query: 407 QRRETVEEKIARHAQGGTKPTREIVVQFNADVADGMQWKFIPTQREVKVKPGESALAFYT 586
           QR+ETVEEKIARH++ GT   REIVVQFNADVADGMQWKF PTQREV+VKPGESALAFYT
Sbjct: 129 QRKETVEEKIARHSESGTVTEREIVVQFNADVADGMQWKFTPTQREVRVKPGESALAFYT 188

Query: 587 AENRSSTPITGVSTYNVTPMKAGKYFNKIQCFCFEEQCLLPGEQIDMPVFFYIDPEIETD 766
           AEN+SS PITGVSTYNVTPMKAG YFNKIQCFCFEEQ LLPGEQIDMPVFFYIDPE ETD
Sbjct: 189 AENKSSAPITGVSTYNVTPMKAGVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETD 248

Query: 767 PNMDGVNNLILSYTFFKVPDK 829
           P MDG+NNLILSYTFFKV ++
Sbjct: 249 PRMDGINNLILSYTFFKVSEE 269


>gb|AAG00893.1|AC064879_11 Similar to cytochrome-c oxidase assembly protein [Arabidopsis
           thaliana]
          Length = 216

 Score =  322 bits (824), Expect = 9e-86
 Identities = 155/189 (82%), Positives = 169/189 (89%)
 Frame = +2

Query: 263 SSSSTQERKSRKMLWWLVGLGCGMVGLTYASVPLYRTFCQVTGYGGTVQRRETVEEKIAR 442
           S+ S  E KS+KML++L  +  GMVGLTYA+VPLYRTFCQ TGYGGTVQR+ETVEEKIAR
Sbjct: 10  STHSPSETKSQKMLYYLTAVVFGMVGLTYAAVPLYRTFCQATGYGGTVQRKETVEEKIAR 69

Query: 443 HAQGGTKPTREIVVQFNADVADGMQWKFIPTQREVKVKPGESALAFYTAENRSSTPITGV 622
           H++ GT   REIVVQFNADVADGMQWKF PTQREV+VKPGESALAFYTAEN+SS PITGV
Sbjct: 70  HSESGTVTEREIVVQFNADVADGMQWKFTPTQREVRVKPGESALAFYTAENKSSAPITGV 129

Query: 623 STYNVTPMKAGKYFNKIQCFCFEEQCLLPGEQIDMPVFFYIDPEIETDPNMDGVNNLILS 802
           STYNVTPMKAG YFNKIQCFCFEEQ LLPGEQIDMPVFFYIDPE ETDP MDG+NNLILS
Sbjct: 130 STYNVTPMKAGVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILS 189

Query: 803 YTFFKVPDK 829
           YTFFKV ++
Sbjct: 190 YTFFKVSEE 198


>ref|XP_003553055.1| PREDICTED: cytochrome c oxidase assembly protein COX11,
           mitochondrial-like [Glycine max]
          Length = 284

 Score =  319 bits (818), Expect = 5e-85
 Identities = 155/203 (76%), Positives = 172/203 (84%)
 Frame = +2

Query: 221 YRSKSLIWRNYSYVSSSSTQERKSRKMLWWLVGLGCGMVGLTYASVPLYRTFCQVTGYGG 400
           Y  KS     + + SS +++E+KSRKML +L GL   MVG TYA+VPLYR FCQ TGYGG
Sbjct: 82  YVGKSCSMPGFRHFSSHASKEQKSRKMLLYLTGLVFAMVGCTYAAVPLYRRFCQATGYGG 141

Query: 401 TVQRRETVEEKIARHAQGGTKPTREIVVQFNADVADGMQWKFIPTQREVKVKPGESALAF 580
           TV RRETVEEKIARH    T  TREIVVQFNAD+ADGMQWKF+PTQREV+VKPGESALAF
Sbjct: 142 TVTRRETVEEKIARHDSNNTVTTREIVVQFNADIADGMQWKFVPTQREVRVKPGESALAF 201

Query: 581 YTAENRSSTPITGVSTYNVTPMKAGKYFNKIQCFCFEEQCLLPGEQIDMPVFFYIDPEIE 760
           YTAEN+SSTPITGVSTYNVTPMKA  YFNKIQCFCFEEQ LLPGEQIDMPVFFYIDPE E
Sbjct: 202 YTAENKSSTPITGVSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFE 261

Query: 761 TDPNMDGVNNLILSYTFFKVPDK 829
           TDP M+G+NN+ILSYTFFKV ++
Sbjct: 262 TDPKMNGINNIILSYTFFKVSEE 284


>ref|XP_004146871.1| PREDICTED: cytochrome c oxidase assembly protein COX11,
           mitochondrial-like [Cucumis sativus]
           gi|449521983|ref|XP_004168008.1| PREDICTED: cytochrome c
           oxidase assembly protein COX11, mitochondrial-like
           [Cucumis sativus]
          Length = 333

 Score =  317 bits (813), Expect = 2e-84
 Identities = 159/203 (78%), Positives = 174/203 (85%)
 Frame = +2

Query: 221 YRSKSLIWRNYSYVSSSSTQERKSRKMLWWLVGLGCGMVGLTYASVPLYRTFCQVTGYGG 400
           Y S   I R+YS    ++  ERKS+ ML++LV L   MVG +YA+VPLYR FCQ TGYGG
Sbjct: 135 YSSLHNIQRSYS----TAAIERKSKNMLFYLVALVLTMVGCSYAAVPLYRRFCQATGYGG 190

Query: 401 TVQRRETVEEKIARHAQGGTKPTREIVVQFNADVADGMQWKFIPTQREVKVKPGESALAF 580
           TVQRRE+VEEKIARHA+ GT  TR+IVVQFNADVADGM WKFIPTQREV+VKPGESALAF
Sbjct: 191 TVQRRESVEEKIARHAKDGTVTTRDIVVQFNADVADGMPWKFIPTQREVRVKPGESALAF 250

Query: 581 YTAENRSSTPITGVSTYNVTPMKAGKYFNKIQCFCFEEQCLLPGEQIDMPVFFYIDPEIE 760
           YTAENRSSTPITGVSTYNVTPMKA  YFNKIQCFCFEEQ LLPGEQIDMPVFFYIDPE E
Sbjct: 251 YTAENRSSTPITGVSTYNVTPMKAAIYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFE 310

Query: 761 TDPNMDGVNNLILSYTFFKVPDK 829
           TDP MDG+NNLILSYTFFKV ++
Sbjct: 311 TDPKMDGINNLILSYTFFKVSEE 333