BLASTX nr result

ID: Coptis23_contig00013336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013336
         (1399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281505.1| PREDICTED: probable membrane-associated kina...   247   6e-63
ref|XP_002314711.1| predicted protein [Populus trichocarpa] gi|2...   242   1e-61
ref|XP_002517210.1| conserved hypothetical protein [Ricinus comm...   240   6e-61
ref|XP_003538639.1| PREDICTED: probable membrane-associated kina...   213   7e-53
ref|XP_004140153.1| PREDICTED: probable membrane-associated kina...   205   3e-50

>ref|XP_002281505.1| PREDICTED: probable membrane-associated kinase regulator 1 [Vitis
            vinifera] gi|147790056|emb|CAN75978.1| hypothetical
            protein VITISV_012182 [Vitis vinifera]
          Length = 343

 Score =  247 bits (630), Expect = 6e-63
 Identities = 164/350 (46%), Positives = 194/350 (55%), Gaps = 17/350 (4%)
 Frame = -1

Query: 1192 RRTNRDPKSQTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNLCPADDLFYKGQLLPLH 1013
            RR   D KSQTL                             ++LCPAD+LFYKGQLLPLH
Sbjct: 5    RRVESDSKSQTLPSSPSHSFSSSSSSDFEFTVSQSPLKSSSNHLCPADELFYKGQLLPLH 64

Query: 1012 LSPRLSMVRTLFLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLVLLNECDSSRP 833
            LSPRLSMVRTL LA                                  LVLL +CDSSRP
Sbjct: 65   LSPRLSMVRTLLLASSSTASSSSDTTTTASRDSTGSSTESTSSFASD-LVLLPDCDSSRP 123

Query: 832  SSVTEEDDFKKLRDQNNCLLPQH------IKKPTKYFSLARISSVFKKDNKNREQENGVS 671
            SSV E+DDFK+L          H      IKK +KYFS +R+SSVF+KD+K RE +N VS
Sbjct: 124  SSVAEDDDFKRLSAHGFLTQAAHGGGYQQIKK-SKYFSFSRLSSVFRKDSKGRESDN-VS 181

Query: 670  GSSVKR----AKEVIRKYVKKVKPLYEKLSQKQQQHASMDGS-------LSMKTEKSVKD 524
            GSSVKR    A+EVIRKY+KKVKPLYEKLSQKQQ      G+       LSMK+E+S+KD
Sbjct: 182  GSSVKRMSSSAREVIRKYLKKVKPLYEKLSQKQQCQQQKMGTDTTAAATLSMKSERSIKD 241

Query: 523  KRDLNSASNTKKDXXXXXXXXXXXXXIRYPRRKGSVLSCPSSMRSSPNHSGVLCKTTVVA 344
               + S  N+  D             +RYPRR+  V SCPSSMRSSP+HSGVLC+    +
Sbjct: 242  VTGI-SVQNSGNDSRGGGFSHSFSGNLRYPRRRRCVSSCPSSMRSSPSHSGVLCRNMYAS 300

Query: 343  GGNGTXXXXXXXXXXXXXXSMEELQNAIQGAIAHCKNSMVQNKNLVSNEI 194
             G                 +MEELQ+AIQGAIAHCKNSM  +K++VSNEI
Sbjct: 301  TGR-------TGGISHMDSTMEELQSAIQGAIAHCKNSMGPSKSMVSNEI 343


>ref|XP_002314711.1| predicted protein [Populus trichocarpa] gi|222863751|gb|EEF00882.1|
            predicted protein [Populus trichocarpa]
          Length = 365

 Score =  242 bits (618), Expect = 1e-61
 Identities = 158/322 (49%), Positives = 189/322 (58%), Gaps = 32/322 (9%)
 Frame = -1

Query: 1063 LCPADDLFYKGQLLPLHLSPRLSMVRTLFLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 884
            LCPAD+LFYKGQLLPLHLSPR+SMVRTL LA                             
Sbjct: 47   LCPADELFYKGQLLPLHLSPRISMVRTLLLASSSTSSSSDTTTTASRDSTGSSNDSTSSF 106

Query: 883  XXXXDLVLLNECDSSRPSSVTEEDDFKKLRD-----QNNCLLPQHIKKP--TKYFSLARI 725
                 +VLL +CDSSRPSSVTE+D+F++L +     QN+  L   I K    KYFSL+R 
Sbjct: 107  TSD--MVLLGDCDSSRPSSVTEDDEFRRLNNNHPHFQNDVHLSSQINKKGSNKYFSLSRF 164

Query: 724  SSVFKKDNKNREQENGVSGSSVKR----AKEVIRKYVKKVKPLYEKLSQKQQQ------H 575
            SSVFKK+NK+RE +N V GSSVKR    AKEVIRKY KKVKPLYEKLSQKQQQ      H
Sbjct: 165  SSVFKKENKSRENDN-VPGSSVKRISVTAKEVIRKYFKKVKPLYEKLSQKQQQKMGGHVH 223

Query: 574  ASMDGS--------LSMKTEKSVKDKRDLNSASNTKKDXXXXXXXXXXXXXI--RYPRRK 425
            + +  S        LS K E+S+KD  D+ S  + +K+                RYPRR+
Sbjct: 224  SILPTSTAINTTVTLSTKLERSMKDIDDVISGKDARKESTANTGVFSHSFSGNLRYPRRR 283

Query: 424  GSVLSCPSSMRSSPNHSGVLCKTTVVAGG-----NGTXXXXXXXXXXXXXXSMEELQNAI 260
              V SCPSSMRSSP+HSGVL K   + G      +                SMEELQ+AI
Sbjct: 284  SCVSSCPSSMRSSPSHSGVLSKNGFMGGSAAGPTSRIAASAGGGMCYGDASSMEELQSAI 343

Query: 259  QGAIAHCKNSMVQNKNLVSNEI 194
            QGAIAHCKNSM+QNK +++NEI
Sbjct: 344  QGAIAHCKNSMMQNKTMINNEI 365


>ref|XP_002517210.1| conserved hypothetical protein [Ricinus communis]
            gi|223543845|gb|EEF45373.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 350

 Score =  240 bits (613), Expect = 6e-61
 Identities = 160/316 (50%), Positives = 187/316 (59%), Gaps = 26/316 (8%)
 Frame = -1

Query: 1063 LCPADDLFYKGQLLPLHLSPRLSMVRTLFLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 884
            LCPAD+LFYKGQLLPLHLSPR+SMVRTL LA                             
Sbjct: 47   LCPADELFYKGQLLPLHLSPRISMVRTLLLASSRTSSSSDTTTTASRDSTGSSNDSTSSF 106

Query: 883  XXXXDLVLLNECDSSRPSSVTE-EDDFKKL-------RDQNNCLLPQHIKKPTKYFSLAR 728
                 LVLL ECDSSRPSSVTE +D+FK+L       +  ++  L   IKK  KYFSL+R
Sbjct: 107  SSD--LVLLGECDSSRPSSVTELDDEFKRLNTNYSHFQGHHHVYLNSQIKKTNKYFSLSR 164

Query: 727  ISSVFKKDNKNREQENGVSGSSVKR----AKEVIRKYVKKVKPLYEKLSQKQQQH----- 575
             SSVFKKD KNRE E     +SVKR    AKEVIRKY+KKVKPLYEKLSQKQQQ      
Sbjct: 165  FSSVFKKDPKNRENEGS---NSVKRMSATAKEVIRKYLKKVKPLYEKLSQKQQQKMGGIN 221

Query: 574  -------ASMDGSLS--MKTEKSVKDKRDLNSASNTKKDXXXXXXXXXXXXXIRYPRRKG 422
                   A +  SLS  +K+E+S     D+ S  N +K+              RYPRR+ 
Sbjct: 222  NLNPTPAAPIISSLSFPIKSERS-----DVVSVKNARKESNGGISHSFSGNL-RYPRRRS 275

Query: 421  SVLSCPSSMRSSPNHSGVLCKTTVVAGGNGTXXXXXXXXXXXXXXSMEELQNAIQGAIAH 242
             V SCPSSMRSSP+HSGVLC+T V+  G  +              SMEELQ+AIQGAIAH
Sbjct: 276  CVSSCPSSMRSSPSHSGVLCRTGVMNSGT-SRVSGGGMHYAADTSSMEELQSAIQGAIAH 334

Query: 241  CKNSMVQNKNLVSNEI 194
            CKNSM+QNK ++SNEI
Sbjct: 335  CKNSMMQNKTMISNEI 350


>ref|XP_003538639.1| PREDICTED: probable membrane-associated kinase regulator 1-like
            [Glycine max]
          Length = 367

 Score =  213 bits (543), Expect = 7e-53
 Identities = 150/335 (44%), Positives = 176/335 (52%), Gaps = 45/335 (13%)
 Frame = -1

Query: 1063 LCPADDLFYKGQLLPLHLSPRLSMVRTLFLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 884
            LCPAD+LFYKGQLLPLHLS R+SMVRTL L+                             
Sbjct: 54   LCPADELFYKGQLLPLHLSQRISMVRTLLLSSSSTSSTSTTARDSTGSSSSFTSD----- 108

Query: 883  XXXXDLVLLNECDSSRPSSVTEEDD-FKKLRDQN----NCLLPQHIKKPTKYFSLARISS 719
                 L L  +CDSSRPSSVT++DD FK+L + N    +     H+KK  KYFS +R SS
Sbjct: 109  -----LALFPDCDSSRPSSVTDQDDDFKRLHNPNPSSSSISKQDHVKKTLKYFSFSRFSS 163

Query: 718  VFKKDN---KNREQENGVSG---SSVKR----AKEVIRKYVKKVKPLYEKLSQKQQQHAS 569
            VF+K+N   K R+ +N  S    SSVKR    A+EVIRKY KKVKPLYEKLSQKQQQ   
Sbjct: 164  VFRKENTTTKTRDLDNAASSNNNSSVKRMSVTAREVIRKYFKKVKPLYEKLSQKQQQQQH 223

Query: 568  MDG----------------------------SLSMKTEKSVKDKRDLNSASNTKKDXXXX 473
              G                            SL  KTE+S K     N     +KD    
Sbjct: 224  RTGGEAGVLLTAEAGATTTTTTTTTTTTSVLSLLTKTERSTKQTEGTNKRG--RKDSSVT 281

Query: 472  XXXXXXXXXIRYPRRKGS-VLSCPSSMRSSPNHSGVLCKTTVVAGGNGTXXXXXXXXXXX 296
                     +RYPRR+ S V SCPSSMRSSPNHSGVL +    A                
Sbjct: 282  ALSHSFSGNLRYPRRRRSCVSSCPSSMRSSPNHSGVLSQRAAAAAAG---------MYCG 332

Query: 295  XXXSMEELQNAIQGAIAHCKNSMVQ-NKNLVSNEI 194
               +MEELQ+AIQGAIAHCKNS++Q NK +VSNEI
Sbjct: 333  DTSTMEELQSAIQGAIAHCKNSLIQTNKTMVSNEI 367


>ref|XP_004140153.1| PREDICTED: probable membrane-associated kinase regulator 1-like
            [Cucumis sativus] gi|449512866|ref|XP_004164164.1|
            PREDICTED: probable membrane-associated kinase regulator
            1-like [Cucumis sativus]
          Length = 360

 Score =  205 bits (521), Expect = 3e-50
 Identities = 145/352 (41%), Positives = 187/352 (53%), Gaps = 24/352 (6%)
 Frame = -1

Query: 1198 MGRRTNRDPKSQTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNLCPADDLFYKGQLLP 1019
            MG+RT +  +SQTL                             + LCPAD+LFYKGQLLP
Sbjct: 1    MGKRTTKSSRSQTLPSSPSHSFSSSSSSSDFEFTISVSPRQASTALCPADELFYKGQLLP 60

Query: 1018 LHLSPRLSMVRTLFLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLVLLNECDSS 839
            LHLSPRLSMVRTL LA                                  +VLL +CDSS
Sbjct: 61   LHLSPRLSMVRTLILASSSTSSSSDTNSTTASRDSTGSSTESHSSFSSD-IVLLGDCDSS 119

Query: 838  RPSSVTEEDDFKKL----------RDQNNCLLPQHIKKPTKYFSLARISSVFKKD----N 701
            RPSSVTE+D+F+            ++ +N  L   +KK +KYFSL+R SSVF+K+    N
Sbjct: 120  RPSSVTEDDEFRARFGINNTKNHKKNHSNPNLQSPMKK-SKYFSLSRFSSVFRKESTTKN 178

Query: 700  KNREQENGVSGSSVKR----AKEVIRKYVKKVKPLYEKLSQK---QQQHASMDGSLSMKT 542
             N E E  VSGS VK+    AKEV RKY+ KVKPLY K+SQK   QQQH         K+
Sbjct: 179  NNSESET-VSGSHVKKISSSAKEVFRKYLNKVKPLYGKISQKHHHQQQH-----EWKTKS 232

Query: 541  EKSVKDKR--DLN-SASNTKKDXXXXXXXXXXXXXIRYPRRKGSVLSCPSSMRSSPNHSG 371
            ++S K+ +  D+  S++N+ K+             +RYPRR+    SCPSS+RSSP+HSG
Sbjct: 233  DRSGKEDKLSDMEFSSNNSGKESGSRALSHSFSGNLRYPRRRNVASSCPSSIRSSPSHSG 292

Query: 370  VLCKTTVVAGGNGTXXXXXXXXXXXXXXSMEELQNAIQGAIAHCKNSMVQNK 215
            +L   T ++                   SMEELQ+AIQGAIAHCK+SMV++K
Sbjct: 293  ILSSRTGLSSMYPANRVGTTMNHSNNTSSMEELQSAIQGAIAHCKSSMVESK 344


Top