BLASTX nr result

ID: Coptis23_contig00013333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013333
         (1308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72220.1| hypothetical protein VITISV_020540 [Vitis vinifera]   129   1e-38
emb|CAN81980.1| hypothetical protein VITISV_032722 [Vitis vinifera]   128   3e-38
emb|CAN78581.1| hypothetical protein VITISV_013553 [Vitis vinifera]   128   4e-38
emb|CAN65667.1| hypothetical protein VITISV_026649 [Vitis vinifera]   128   5e-38
emb|CAN79223.1| hypothetical protein VITISV_018836 [Vitis vinifera]   127   5e-38

>emb|CAN72220.1| hypothetical protein VITISV_020540 [Vitis vinifera]
          Length = 549

 Score =  129 bits (323), Expect(2) = 1e-38
 Identities = 96/354 (27%), Positives = 161/354 (45%), Gaps = 17/354 (4%)
 Frame = +2

Query: 296  GGASDWYYRLPSKSITNFQELEQAFVDHFIHQKRRVVDIAALFNVRQRSAESVREYLCRF 475
            G A  W++RLP  S+ +F++L +AFV  ++   R   +I+ L N++ +  ES+RE++ RF
Sbjct: 64   GQALSWFHRLPPNSVGDFRDLSEAFVGQYLCSARHKQNISTLQNIKMQDNESLREFVKRF 123

Query: 476  KAETLKVENLDERTAVIAFERGLRPGTAVHQFVVKNEIATLHELYPRVEKYIRYEDTMQK 655
                L+VE       +  F+R + PGT   + + K    T+ +L+ R  KY   ED ++ 
Sbjct: 124  GQVVLQVEACSMDAVLQIFKRSICPGTPFFESLAKKPPTTMDDLFRRANKYSMLEDDVRA 183

Query: 656  ESKRGAKTVSAVEKGSERRKTEGNDR--GGERYRGQPSRLERGREIARREQRERKSYREV 829
             +++         +    R T+  DR    +R +  PSR ER                  
Sbjct: 184  ATQQ-VLVAGRPSRSDAERNTKPXDRPKPSDRRQEGPSRXER-----------------P 225

Query: 830  EQVPLARPLSEILPLIKNVQGYEGPR---TILAEMPNKPYCEYHQVHNHETNDCYALKWL 1000
               PL+    ++LP+I+ +  +  PR   T  +   +   C +H+ H H T  C A ++L
Sbjct: 226  PLTPLSISYEKLLPMIQGLSDFRWPRPQGTDPSTRDHSKRCVFHKDHGHTTETCRAFQFL 285

Query: 1001 VQRLIEKGMLREFV-----EEPPNREHVPAAGR-------ILETINVIFSGEALSHNAHR 1144
            V+RLI+ G L++++     E   ++ H P A R       I+  IN   S E       R
Sbjct: 286  VERLIKAGHLKQYLRSDNGERDASQHHNPGAPRAPTAPKAIINYINGSPSDEEYDSRRKR 345

Query: 1145 DKVRRTASIQQVNESHRGQRYRAELMSGEEKITFSKADLRAVDTPHEDALVITV 1306
             K+ R ASI++   S R           +  I F   D      PH DAL++++
Sbjct: 346  QKLLRAASIRERINSIRPGLTGGGPRPIDGTIIFPPVDPTRTLQPHRDALILSL 399



 Score = 58.5 bits (140), Expect(2) = 1e-38
 Identities = 30/62 (48%), Positives = 36/62 (58%)
 Frame = +3

Query: 114 PLADAIWTSEVPKRFNQPRFERYDGTGDPADHIHHFRQQMPLWQEARYDGLRCMMFPASL 293
           P    I   E P+ F  P+F  YDGT DP DHI H+RQ M L  +   D L C +FPASL
Sbjct: 5   PFCSHIINYEPPRGFLVPKFSTYDGTNDPFDHIMHYRQLMTL--DIGNDALLCKVFPASL 62

Query: 294 KG 299
           +G
Sbjct: 63  QG 64


>emb|CAN81980.1| hypothetical protein VITISV_032722 [Vitis vinifera]
          Length = 549

 Score =  128 bits (322), Expect(2) = 3e-38
 Identities = 97/354 (27%), Positives = 156/354 (44%), Gaps = 17/354 (4%)
 Frame = +2

Query: 296  GGASDWYYRLPSKSITNFQELEQAFVDHFIHQKRRVVDIAALFNVRQRSAESVREYLCRF 475
            G A  W++RLPS S+ NF++L +AFV  ++   R   +I+ L N++ R  ES+RE++ RF
Sbjct: 64   GQAFSWFHRLPSNSVDNFRDLSEAFVGQYLCSARHKQNISTLQNIKMRDNESLREFVKRF 123

Query: 476  KAETLKVENLDERTAVIAFERGLRPGTAVHQFVVKNEIATLHELYPRVEKYIRYEDTMQK 655
                L++E       +  F+R + PGT   + + K    T+ +L+ R  KY   ED +  
Sbjct: 124  GQAVLQIEACSMDAVLQIFKRSICPGTPFFESLAKKPPITMDDLFRRANKYSMLEDDV-- 181

Query: 656  ESKRGAKTVSAVEKGSERRKTEGNDRGGERYRGQPSRLERGREIARREQRERKSYREVEQ 835
                 A T   +  G   R    N  G  +    P   +R +E   R +           
Sbjct: 182  ----CAATQQVLVAG---RPARNNTEGSNKPPDHPKPSDRKQEGPSRPEMP-------SL 227

Query: 836  VPLARPLSEILPLIKNVQGYEGPRTILAEMPNKP---YCEYHQVHNHETNDCYALKWLVQ 1006
             PL+    ++LP+I+ +  +  PR I  +   +     C +H+ H H T  C A  +LV+
Sbjct: 228  TPLSISYEKLLPMIQGLSDFRWPRPIGTDPSTRDRSRRCAFHKDHGHTTETCRAFXFLVE 287

Query: 1007 RLIEKGMLREFV-----------EEPPNREHVPAAGRILETINVIFSG---EALSHNAHR 1144
            RLI+ G L++++              P    VP A + +  IN I  G   E       R
Sbjct: 288  RLIKAGHLKQYLRTDTGGRDVSQHSNPGAPRVPVAPKAI--INYIXGGPSDEEYDSRRKR 345

Query: 1145 DKVRRTASIQQVNESHRGQRYRAELMSGEEKITFSKADLRAVDTPHEDALVITV 1306
             K+ R ASI++   S R           +  I F   D      PH DAL++++
Sbjct: 346  QKLLRAASIRERINSIRPGLTGEGPRPIDGTIIFPPVDPTRTLQPHRDALILSL 399



 Score = 57.8 bits (138), Expect(2) = 3e-38
 Identities = 30/62 (48%), Positives = 36/62 (58%)
 Frame = +3

Query: 114 PLADAIWTSEVPKRFNQPRFERYDGTGDPADHIHHFRQQMPLWQEARYDGLRCMMFPASL 293
           P    I   E P+ F  P+F  YDGT DP DHI H+RQ M L  +   D L C +FPASL
Sbjct: 5   PFCSHIIHYEPPRGFLVPKFSTYDGTNDPFDHIMHYRQLMTL--DIGNDALLCKVFPASL 62

Query: 294 KG 299
           +G
Sbjct: 63  QG 64


>emb|CAN78581.1| hypothetical protein VITISV_013553 [Vitis vinifera]
          Length = 509

 Score =  128 bits (321), Expect(2) = 4e-38
 Identities = 97/352 (27%), Positives = 159/352 (45%), Gaps = 15/352 (4%)
 Frame = +2

Query: 296  GGASDWYYRLPSKSITNFQELEQAFVDHFIHQKRRVVDIAALFNVRQRSAESVREYLCRF 475
            G A  W++RLP  S+ NF++L +AFV  ++   R   +I+ L N++ R  ES+RE++ RF
Sbjct: 64   GQALSWFHRLPPNSVDNFRDLSEAFVGQYLCSARHKQNISILQNIKMRDNESLREFVKRF 123

Query: 476  KAETLKVENLDERTAVIAFERGLRPGTAVHQFVVKNEIATLHELYPRVEKYIRYEDTMQK 655
                L++E       +  F+R + PGT   + + K    T+ +L+ R  KY   ED +  
Sbjct: 124  GQAVLQIEACSMDAVLQIFKRSICPGTPFFESLAKKPPTTIDDLFRRANKYSMLEDDV-- 181

Query: 656  ESKRGAKTVSAVEKGSERRKTEGNDRGGERYRGQPSRLERGREIARREQRERKSYREVEQ 835
               R A     V     R   EG+++  +R    P   +R +E   R +           
Sbjct: 182  ---RAATQQVLVAGRPARSSMEGSNKPPDR----PKPSDRKQEGPSRPEMP-------PL 227

Query: 836  VPLARPLSEILPLIKNVQGYEGPRTILAEMPNKP---YCEYHQVHNHETNDCYALKWLVQ 1006
             PL+    ++LP+I+ +  +  PR I  +   K     C +H+ H H T  C A ++LV+
Sbjct: 228  TPLSISYEKLLPMIQGLSDFRWPRPIGTDPSTKDRSRRCAFHKDHGHTTETCRAFQFLVE 287

Query: 1007 RLIEKGMLREFVEEPPNREHV-----PAAGR-------ILETINVIFSGEALSHNAHRDK 1150
            RLI+ G L++++        V     P A R       ++  IN   S E       R K
Sbjct: 288  RLIKAGHLKQYLRTDTGNRDVSQHNNPGAPRVSVAPKAVISYINGGPSDEEYDSRRKRQK 347

Query: 1151 VRRTASIQQVNESHRGQRYRAELMSGEEKITFSKADLRAVDTPHEDALVITV 1306
            + R ASI++   S R           +E I F   D      P+ DAL++++
Sbjct: 348  LLRAASIRERINSIRPGLTGEGPRPIDETIIFPPVDPARTLQPYSDALILSL 399



 Score = 57.8 bits (138), Expect(2) = 4e-38
 Identities = 30/62 (48%), Positives = 36/62 (58%)
 Frame = +3

Query: 114 PLADAIWTSEVPKRFNQPRFERYDGTGDPADHIHHFRQQMPLWQEARYDGLRCMMFPASL 293
           P    I   E P+ F  P+F  YDGT DP DHI H+RQ M L  +   D L C +FPASL
Sbjct: 5   PFCSHIIHYEPPRGFLVPKFSTYDGTNDPFDHIMHYRQLMTL--DIGNDALLCKVFPASL 62

Query: 294 KG 299
           +G
Sbjct: 63  QG 64


>emb|CAN65667.1| hypothetical protein VITISV_026649 [Vitis vinifera]
          Length = 549

 Score =  128 bits (322), Expect(2) = 5e-38
 Identities = 93/352 (26%), Positives = 160/352 (45%), Gaps = 15/352 (4%)
 Frame = +2

Query: 296  GGASDWYYRLPSKSITNFQELEQAFVDHFIHQKRRVVDIAALFNVRQRSAESVREYLCRF 475
            G A  W++RLP  SI NF++L +AFV  ++   R   +I+ L N++ R +ES+RE++ RF
Sbjct: 64   GQALSWFHRLPPNSIDNFRDLSEAFVGQYLCSARHKQNISTLQNIKMRDSESLREFVKRF 123

Query: 476  KAETLKVENLDERTAVIAFERGLRPGTAVHQFVVKNEIATLHELYPRVEKYIRYEDTMQK 655
                L++E       +  F+R + PGT   + + K    T+ +L+ R  KY   ED ++ 
Sbjct: 124  GQAVLQIEVCSMNAVLQIFKRSICPGTPFFESLAKKPPTTMDDLFRRANKYSMLEDDVR- 182

Query: 656  ESKRGAKTVSAVEKGSERRKTEGNDRGGERYRGQPSRLERGREIARREQRERKSYREVEQ 835
                 A T   +  G   R         +R+   P   +R + + RR+    +  R    
Sbjct: 183  -----AATQQVLVAGRASRD------NADRHAKPP---DRPKPVDRRQDGPNRPDRP-PI 227

Query: 836  VPLARPLSEILPLIKNVQGYEGPRTILAEMPNKPY---CEYHQVHNHETNDCYALKWLVQ 1006
             PL+    ++LP+I+ +  +  PR +  +   + +   C +H+ H H T  C +L++LV+
Sbjct: 228  TPLSISYEKLLPMIQGLSDFRWPRPLETDPSIRDHSKKCAFHKDHGHTTETCRSLQYLVE 287

Query: 1007 RLIEKGMLREFVEEPPNREHVP------------AAGRILETINVIFSGEALSHNAHRDK 1150
            RLI+ G L++++         P            A   ++  IN   S E       R K
Sbjct: 288  RLIKAGHLKQYLRSDTGGRDAPQHHNSGXPRAPVAPKAVINYINGGPSDEEYDSRRKRQK 347

Query: 1151 VRRTASIQQVNESHRGQRYRAELMSGEEKITFSKADLRAVDTPHEDALVITV 1306
            + R ASI++   S R           +  I F   D      PH DAL++++
Sbjct: 348  LLRAASIRERINSIRPGLTGEGPRPIDGTIIFPPVDPTRTLQPHRDALILSL 399



 Score = 57.0 bits (136), Expect(2) = 5e-38
 Identities = 28/53 (52%), Positives = 34/53 (64%)
 Frame = +3

Query: 141 EVPKRFNQPRFERYDGTGDPADHIHHFRQQMPLWQEARYDGLRCMMFPASLKG 299
           E P+ F  P+F  YDGT DP DHI H+RQ M L  +   D L C +FPASL+G
Sbjct: 14  EPPRGFLVPKFSTYDGTNDPFDHIMHYRQLMTL--DIGNDALLCKVFPASLQG 64


>emb|CAN79223.1| hypothetical protein VITISV_018836 [Vitis vinifera]
          Length = 549

 Score =  127 bits (320), Expect(2) = 5e-38
 Identities = 97/354 (27%), Positives = 163/354 (46%), Gaps = 17/354 (4%)
 Frame = +2

Query: 296  GGASDWYYRLPSKSITNFQELEQAFVDHFIHQKRRVVDIAALFNVRQRSAESVREYLCRF 475
            G A  W++RLP  S+ NF++L +AFV  ++   R   +I+ L N++ R  ES+RE++ RF
Sbjct: 64   GQALSWFHRLPPNSVDNFRDLSEAFVGQYLCSARHKQNISTLQNIKMRDNESLREFVKRF 123

Query: 476  KAETLKVENLDERTAVIAFERGLRPGTAVHQFVVKNEIATLHELYPRVEKYIRYEDTMQK 655
                L++E       +  F+R + PGT   + + K    T+ +L+ R  KY   ED +  
Sbjct: 124  GQTVLQIEACSMDAVLQIFKRSICPGTPFFESLAKKPPTTMDDLFRRANKYSMLEDDV-- 181

Query: 656  ESKRGAKTVSAVEKGSERRKTEGNDRGGERYRGQPSRLERGREIARREQRERKSYREVEQ 835
               R A     V     R  TEGN++  +R    P   +R +E   R +    +      
Sbjct: 182  ---RAATQQVLVAGRPSRNNTEGNNKPLDR----PKPSDRKQEGPSRPEMPPLTL----- 229

Query: 836  VPLARPLSEILPLIKNVQGYEGPRTILAEMPNKP---YCEYHQVHNHETNDCYALKWLVQ 1006
              L+    ++LP+I+ +  +  PR I  +   +     C +H+ H H T  C + ++LV+
Sbjct: 230  --LSISYEKLLPMIQGLSDFRWPRPIATDPSTRDRSRRCXFHKDHGHTTETCRSFQFLVE 287

Query: 1007 RLIEKGMLREFV------EEPPNREH-----VPAAGRILETINVIFSG---EALSHNAHR 1144
            +LI+ G L++++       + P R +      PAA + +  IN I  G   E       R
Sbjct: 288  KLIKAGHLKQYLRADNRGRDAPQRHNPGNLRAPAAPKAV--INYITGGPSDEEYDSRRKR 345

Query: 1145 DKVRRTASIQQVNESHRGQRYRAELMSGEEKITFSKADLRAVDTPHEDALVITV 1306
             K+ R ASI++   S R           +  I F   D      PH DAL++++
Sbjct: 346  QKLLRAASIRERINSIRPGLTGESPRPIDGTIIFPPVDPTRTLQPHXDALILSL 399



 Score = 57.8 bits (138), Expect(2) = 5e-38
 Identities = 30/62 (48%), Positives = 36/62 (58%)
 Frame = +3

Query: 114 PLADAIWTSEVPKRFNQPRFERYDGTGDPADHIHHFRQQMPLWQEARYDGLRCMMFPASL 293
           P    I   E P+ F  P+F  YDGT DP DHI H+RQ M L  +   D L C +FPASL
Sbjct: 5   PFCSHIIHYEPPRGFLVPKFSTYDGTNDPFDHIMHYRQLMTL--DIGNDALLCKVFPASL 62

Query: 294 KG 299
           +G
Sbjct: 63  QG 64


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