BLASTX nr result
ID: Coptis23_contig00013306
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00013306
(1029 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276526.2| PREDICTED: transcription factor MYB75-like [... 227 4e-57
ref|XP_002318546.1| predicted protein [Populus trichocarpa] gi|2... 212 1e-52
gb|ADF43752.1| MYB [Camellia sinensis] 201 2e-49
gb|AFM77857.1| myb domain protein [Hevea brasiliensis] 197 5e-48
ref|NP_001141174.1| MYB transcription factor [Zea mays] gi|19470... 184 4e-44
>ref|XP_002276526.2| PREDICTED: transcription factor MYB75-like [Vitis vinifera]
gi|297734217|emb|CBI15464.3| unnamed protein product
[Vitis vinifera]
Length = 328
Score = 227 bits (578), Expect = 4e-57
Identities = 132/265 (49%), Positives = 150/265 (56%), Gaps = 24/265 (9%)
Frame = -2
Query: 1028 SCRLRWLNYLKPDVKRGNLTLEEQVLILELHSKWGNRWSRIAQHLPGRTDNEIKNYWRTR 849
SCRLRWLNYLKPDVKRGNLT +EQ+LILELHSKWGNRWS+IAQHLPGRTDNEIKNYWRTR
Sbjct: 58 SCRLRWLNYLKPDVKRGNLTPQEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTR 117
Query: 848 VQKQARHLNIDANSTRFRDAIRCFWMPRLLQKIEENXXXXXXXXXXXSPAPLLPNPAPQG 669
VQKQARHL ID+NS F+D IRC WMPRLLQKIE + L + Q
Sbjct: 118 VQKQARHLKIDSNSRAFQDVIRCVWMPRLLQKIEGSSSTSSTTSQVSIIPQSLNHADSQQ 177
Query: 668 SLLQAPPP-----PSQMSLDIRQM--------RCFXXXXXXXXXXXXXXXXXXXSVPETT 528
APPP P Q L I + + + +
Sbjct: 178 HSAAAPPPVVAQAPVQGPLSINETINNLEHNEKNSSSENCTSPSICSSESMNISQISQIP 237
Query: 527 GYPTSP----------SAIVNLASNPYLQDCDMEAFNLDHMSTIMGS-ENSISDRQMVES 381
YPTSP S ++ N + +ME FNL MS G EN + D MVES
Sbjct: 238 DYPTSPFQAMSNSDDYSTLLKGYYNVDNSNYEMETFNLASMSAPQGDFENPVGDCPMVES 297
Query: 380 YWVNDEEADGLWNMDELW*FRKLQE 306
WV+ + AD LWNMDELW F KLQE
Sbjct: 298 NWVDSDLADSLWNMDELWQFWKLQE 322
>ref|XP_002318546.1| predicted protein [Populus trichocarpa] gi|222859219|gb|EEE96766.1|
predicted protein [Populus trichocarpa]
Length = 327
Score = 212 bits (540), Expect = 1e-52
Identities = 131/266 (49%), Positives = 150/266 (56%), Gaps = 22/266 (8%)
Frame = -2
Query: 1028 SCRLRWLNYLKPDVKRGNLTLEEQVLILELHSKWGNRWSRIAQHLPGRTDNEIKNYWRTR 849
SCRLRWLNYLKPDVKRGNLT +EQ+LIL+LHSKWGNRWS+IAQHLPGRTDNEIKNYWRTR
Sbjct: 62 SCRLRWLNYLKPDVKRGNLTPQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTR 121
Query: 848 VQKQARHLNIDANSTRFRDAIRCFWMPRLLQKI-EENXXXXXXXXXXXSPAPLLPNPAPQ 672
VQKQARHL IDANST F+D IR WMPRLLQKI + + + L+PN APQ
Sbjct: 122 VQKQARHLRIDANSTAFQDIIRRSWMPRLLQKIGGSSTSSSAMTCQSPAVSQLIPNYAPQ 181
Query: 671 GSLL-QAPPPPSQMS--LDIR-QMRCF-------XXXXXXXXXXXXXXXXXXXSVPETTG 525
S A PPP Q LD+ M C + +
Sbjct: 182 LSAFPTALPPPQQQEAPLDMSVMMHCMEHREQTSDSEHGTSSCISSAESMNVSQMSHLSE 241
Query: 524 YPTSPSAIV--NLASNPYLQDC--------DMEAFNLDHMSTIMGSENSISDRQMVESYW 375
YP SP + N + ++DC DMEA NL MS S DR M + W
Sbjct: 242 YPKSPFQAMGNNGDYSTLVKDCYYVDSNFYDMEAINLATMSVPGELGISAVDRHMGDGDW 301
Query: 374 VNDEEADGLWNMDELW*FRKLQESNI 297
+ D +WNMDELW FR LQ I
Sbjct: 302 AGYDFGDTVWNMDELWQFRNLQGKEI 327
>gb|ADF43752.1| MYB [Camellia sinensis]
Length = 310
Score = 201 bits (511), Expect = 2e-49
Identities = 119/264 (45%), Positives = 152/264 (57%), Gaps = 23/264 (8%)
Frame = -2
Query: 1028 SCRLRWLNYLKPDVKRGNLTLEEQVLILELHSKWGNRWSRIAQHLPGRTDNEIKNYWRTR 849
SCRLRWLNYLKPDVKRGNLT EEQ+LILELHSKWGNRWS+IAQHLPGRTDNEIKNYWRTR
Sbjct: 58 SCRLRWLNYLKPDVKRGNLTPEEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTR 117
Query: 848 VQKQARHLNIDANSTRFRDAIRCFWMPRLLQKIEENXXXXXXXXXXXSPAPLLPNPAPQG 669
VQKQARHL ID NS F++ IRCFWMPRL+QKI + SP+ ++ Q
Sbjct: 118 VQKQARHLKIDPNSAAFQEVIRCFWMPRLIQKIRGS----------SSPSSVI---LSQN 164
Query: 668 SLLQAPPPPSQMSLDIRQMRCFXXXXXXXXXXXXXXXXXXXSVPETTGYPTSPSAIVNLA 489
+ + P + SL Q+ S+ +T S S +N++
Sbjct: 165 LAIASRPLINHSSLP-PQVSPQENVYTSETTNNLDHHVKNSSLEHSTSPSVSSSESMNIS 223
Query: 488 SNPYLQDCDMEA---------------FNLDHMSTIMGS--------ENSISDRQMVESY 378
+ + +EA +N+D++S M + ENSI + +S
Sbjct: 224 HMTQVSEYPIEAMGNSHDYNTFLKGGCYNVDNISYDMETFNISSVEFENSIGGCHVSQSN 283
Query: 377 WVNDEEADGLWNMDELW*FRKLQE 306
W+++E D WNMDELW F++LQE
Sbjct: 284 WIDNEFGDSFWNMDELWQFKQLQE 307
>gb|AFM77857.1| myb domain protein [Hevea brasiliensis]
Length = 314
Score = 197 bits (500), Expect = 5e-48
Identities = 112/250 (44%), Positives = 141/250 (56%), Gaps = 17/250 (6%)
Frame = -2
Query: 1028 SCRLRWLNYLKPDVKRGNLTLEEQVLILELHSKWGNRWSRIAQHLPGRTDNEIKNYWRTR 849
SCRLRWLNYLKPDVKRGNLT +EQ+LIL+LHSKWGNRWS+IAQHLPGRTDNEIKNYWRTR
Sbjct: 66 SCRLRWLNYLKPDVKRGNLTPQEQLLILDLHSKWGNRWSKIAQHLPGRTDNEIKNYWRTR 125
Query: 848 VQKQARHLNIDANSTRFRDAIRCFWMPRLLQKIEENXXXXXXXXXXXSPAPLLPNPAPQG 669
VQKQARHL +DANST F+D I+CFW+PRLLQKIE + S L NP
Sbjct: 126 VQKQARHLKVDANSTAFQDIIKCFWIPRLLQKIEGSSTSCSSTSTSSSSTILSQNPTVVS 185
Query: 668 SL--------LQAPPPPSQMSLDI------RQMRCFXXXXXXXXXXXXXXXXXXXSVPET 531
L P PP Q+ ++ + +
Sbjct: 186 DQPVNYSAHDLPFPIPPPQLPQEVSGNLQGNLDHNSDSEHGSNSCISSTESMNISQISQL 245
Query: 530 TGYPTSPSAIVNLASNPYLQDC---DMEAFNLDHMSTIMGSENSISDRQMVESYWVNDEE 360
+ YPTSP + + + +DC D +N++ M+ S + + + ES WV +
Sbjct: 246 SEYPTSPFHPI----STFQKDCYYVDSGCYNMESMTPATLSVPAGVFQNVAESNWVGYDF 301
Query: 359 ADGLWNMDEL 330
D +W+MDEL
Sbjct: 302 GDNIWSMDEL 311
>ref|NP_001141174.1| MYB transcription factor [Zea mays] gi|194703072|gb|ACF85620.1|
unknown [Zea mays] gi|323388577|gb|ADX60093.1| MYB
transcription factor [Zea mays]
gi|413947275|gb|AFW79924.1| putative MYB DNA-binding
domain superfamily protein [Zea mays]
Length = 362
Score = 184 bits (466), Expect = 4e-44
Identities = 88/128 (68%), Positives = 98/128 (76%)
Frame = -2
Query: 1028 SCRLRWLNYLKPDVKRGNLTLEEQVLILELHSKWGNRWSRIAQHLPGRTDNEIKNYWRTR 849
SCRLRWLNYLKPD+KRGNLT EEQ+LILELHSKWGNRWSRIAQHLPGRTDNEIKNYWRTR
Sbjct: 68 SCRLRWLNYLKPDIKRGNLTPEEQLLILELHSKWGNRWSRIAQHLPGRTDNEIKNYWRTR 127
Query: 848 VQKQARHLNIDANSTRFRDAIRCFWMPRLLQKIEENXXXXXXXXXXXSPAPLLPNPAPQG 669
VQKQAR L +DANS FRDA+RC+WMPRLL+K+ + P PL P+ G
Sbjct: 128 VQKQARQLRVDANSAVFRDAVRCYWMPRLLEKMAAH-----HHGDGELPPPLHPSHNIAG 182
Query: 668 SLLQAPPP 645
+ PP
Sbjct: 183 TASSRSPP 190