BLASTX nr result

ID: Coptis23_contig00013303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013303
         (1546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277619.1| PREDICTED: DNA-binding protein SMUBP-2-like ...   806   0.0  
emb|CBI29875.3| unnamed protein product [Vitis vinifera]              806   0.0  
ref|XP_003553421.1| PREDICTED: DNA-binding protein SMUBP-2-like ...   801   0.0  
ref|XP_002308965.1| predicted protein [Populus trichocarpa] gi|2...   800   0.0  
emb|CAN80641.1| hypothetical protein VITISV_016912 [Vitis vinifera]   800   0.0  

>ref|XP_002277619.1| PREDICTED: DNA-binding protein SMUBP-2-like [Vitis vinifera]
          Length = 647

 Score =  806 bits (2081), Expect = 0.0
 Identities = 421/499 (84%), Positives = 454/499 (90%)
 Frame = -1

Query: 1498 SKKKSSAPPISLDQFITTMSPLIDMEKXXXXXXXXXXXXSRNLDTAQKRGSTILNLKCVD 1319
            S +KSSA  ISL QFI+T++PLID+EK             RNLDTAQKRGSTILNLKCVD
Sbjct: 6    SNRKSSA--ISLQQFISTIAPLIDLEKDAEISGSISSGSLRNLDTAQKRGSTILNLKCVD 63

Query: 1318 AQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADVGSPSLGQGVVYRLKDSSIT 1139
            AQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKAD+GSP+LGQGVVYRLKDSSIT
Sbjct: 64   AQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSIT 123

Query: 1138 VAFEDIPEDGLNSTLRLEKVANEITFRRMKDTLIQLSKGVHKGPAADLVPVLFGERPPTV 959
            VAF+DIPE+GLNS LRLEKVANE+T+RRMKD L+QLSKGVHKGP ADL+PVLFGERPPTV
Sbjct: 124  VAFDDIPEEGLNSPLRLEKVANEVTYRRMKDALVQLSKGVHKGPTADLIPVLFGERPPTV 183

Query: 958  AKKESSFTLFNSNLDHSQKDAISKALSSKNLFLLHXXXXXXXXXTVVEIILQEVKRGSKI 779
            +KK+ +FT FNSNLD SQKDAISKALSSKN+FLLH         TVVEIILQEVKRG+KI
Sbjct: 184  SKKDVTFTPFNSNLDRSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGAKI 243

Query: 778  LACAASNIAVDNIVERLVPHRVKLVRLGHPARLLPQVLESALDAQVLRGDNSALANDIRK 599
            LACAASNIAVDNIVERLVP+RVKLVRLGHPARLLPQVLESALDAQVLRGDN+ LANDIRK
Sbjct: 244  LACAASNIAVDNIVERLVPYRVKLVRLGHPARLLPQVLESALDAQVLRGDNTGLANDIRK 303

Query: 598  EMKALNGKLLKTKDRNTKRDIRKELRTLSKEERKRQQLAVTDVIKSADVVLTTLTGASSH 419
            EMKALNGKLLKTKD+NT+RDIRKEL+TLSKEERKRQQLAVTDVIK+A+VVLTTLTGA S 
Sbjct: 304  EMKALNGKLLKTKDKNTRRDIRKELKTLSKEERKRQQLAVTDVIKNANVVLTTLTGAVSR 363

Query: 418  KLESTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTIQSDEAARKGLGRTL 239
            KLE+ SFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTIQS EA +KGLGRTL
Sbjct: 364  KLENISFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTIQSVEAEKKGLGRTL 423

Query: 238  FERLAGLYGDEVMAMLTVQYRMHELIMEYSSKELYDSKVKAHSSVAAHMLYDLENVKRSS 59
            FERLA LYGDEVM+MLTVQYRMHELIM +SSKELY+SK+ AH SVAAHML DLE+VK+SS
Sbjct: 424  FERLADLYGDEVMSMLTVQYRMHELIMNWSSKELYNSKITAHPSVAAHMLSDLEDVKKSS 483

Query: 58   STEPTLLLIDIAGCDMEEK 2
            STE TLLLID AGCDMEEK
Sbjct: 484  STESTLLLIDTAGCDMEEK 502


>emb|CBI29875.3| unnamed protein product [Vitis vinifera]
          Length = 647

 Score =  806 bits (2081), Expect = 0.0
 Identities = 421/499 (84%), Positives = 454/499 (90%)
 Frame = -1

Query: 1498 SKKKSSAPPISLDQFITTMSPLIDMEKXXXXXXXXXXXXSRNLDTAQKRGSTILNLKCVD 1319
            S +KSSA  ISL QFI+T++PLID+EK             RNLDTAQKRGSTILNLKCVD
Sbjct: 6    SNRKSSA--ISLQQFISTIAPLIDLEKAHSHSLSNLSGSLRNLDTAQKRGSTILNLKCVD 63

Query: 1318 AQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADVGSPSLGQGVVYRLKDSSIT 1139
            AQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKAD+GSP+LGQGVVYRLKDSSIT
Sbjct: 64   AQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSIT 123

Query: 1138 VAFEDIPEDGLNSTLRLEKVANEITFRRMKDTLIQLSKGVHKGPAADLVPVLFGERPPTV 959
            VAF+DIPE+GLNS LRLEKVANE+T+RRMKD L+QLSKGVHKGP ADL+PVLFGERPPTV
Sbjct: 124  VAFDDIPEEGLNSPLRLEKVANEVTYRRMKDALVQLSKGVHKGPTADLIPVLFGERPPTV 183

Query: 958  AKKESSFTLFNSNLDHSQKDAISKALSSKNLFLLHXXXXXXXXXTVVEIILQEVKRGSKI 779
            +KK+ +FT FNSNLD SQKDAISKALSSKN+FLLH         TVVEIILQEVKRG+KI
Sbjct: 184  SKKDVTFTPFNSNLDRSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGAKI 243

Query: 778  LACAASNIAVDNIVERLVPHRVKLVRLGHPARLLPQVLESALDAQVLRGDNSALANDIRK 599
            LACAASNIAVDNIVERLVP+RVKLVRLGHPARLLPQVLESALDAQVLRGDN+ LANDIRK
Sbjct: 244  LACAASNIAVDNIVERLVPYRVKLVRLGHPARLLPQVLESALDAQVLRGDNTGLANDIRK 303

Query: 598  EMKALNGKLLKTKDRNTKRDIRKELRTLSKEERKRQQLAVTDVIKSADVVLTTLTGASSH 419
            EMKALNGKLLKTKD+NT+RDIRKEL+TLSKEERKRQQLAVTDVIK+A+VVLTTLTGA S 
Sbjct: 304  EMKALNGKLLKTKDKNTRRDIRKELKTLSKEERKRQQLAVTDVIKNANVVLTTLTGAVSR 363

Query: 418  KLESTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTIQSDEAARKGLGRTL 239
            KLE+ SFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTIQS EA +KGLGRTL
Sbjct: 364  KLENISFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTIQSVEAEKKGLGRTL 423

Query: 238  FERLAGLYGDEVMAMLTVQYRMHELIMEYSSKELYDSKVKAHSSVAAHMLYDLENVKRSS 59
            FERLA LYGDEVM+MLTVQYRMHELIM +SSKELY+SK+ AH SVAAHML DLE+VK+SS
Sbjct: 424  FERLADLYGDEVMSMLTVQYRMHELIMNWSSKELYNSKITAHPSVAAHMLSDLEDVKKSS 483

Query: 58   STEPTLLLIDIAGCDMEEK 2
            STE TLLLID AGCDMEEK
Sbjct: 484  STESTLLLIDTAGCDMEEK 502


>ref|XP_003553421.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max]
          Length = 648

 Score =  801 bits (2069), Expect = 0.0
 Identities = 413/499 (82%), Positives = 452/499 (90%)
 Frame = -1

Query: 1498 SKKKSSAPPISLDQFITTMSPLIDMEKXXXXXXXXXXXXSRNLDTAQKRGSTILNLKCVD 1319
            SKKK S  P+SL+QFI+  +PL+D+EK            SRNLDTAQKRGSTILNLKCVD
Sbjct: 7    SKKKPS--PLSLEQFISITAPLLDLEKEAEISSSIATGASRNLDTAQKRGSTILNLKCVD 64

Query: 1318 AQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADVGSPSLGQGVVYRLKDSSIT 1139
             QTGLMGK+L+EFQSTKGDVLPAHKFGTHDVVVLK NKAD+GSP+LGQGVVYRLKDSSIT
Sbjct: 65   VQTGLMGKSLIEFQSTKGDVLPAHKFGTHDVVVLKLNKADLGSPALGQGVVYRLKDSSIT 124

Query: 1138 VAFEDIPEDGLNSTLRLEKVANEITFRRMKDTLIQLSKGVHKGPAADLVPVLFGERPPTV 959
            VAF+DIPEDGLNS LRLEKVANE+T+RRMKD LIQLSKGVHKGPA+DL+PVLFGERPP V
Sbjct: 125  VAFDDIPEDGLNSPLRLEKVANEVTYRRMKDALIQLSKGVHKGPASDLIPVLFGERPPAV 184

Query: 958  AKKESSFTLFNSNLDHSQKDAISKALSSKNLFLLHXXXXXXXXXTVVEIILQEVKRGSKI 779
            +KK+ SFT FN NLDHSQK+A+SKALSSKN+FLLH         TVVEIILQEVKRGSKI
Sbjct: 185  SKKDVSFTPFNKNLDHSQKEAVSKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKI 244

Query: 778  LACAASNIAVDNIVERLVPHRVKLVRLGHPARLLPQVLESALDAQVLRGDNSALANDIRK 599
            LACAASNIAVDNIVERLVPHRVKLVRLGHPARLLPQVL+SALDAQVLRGDNS LANDIRK
Sbjct: 245  LACAASNIAVDNIVERLVPHRVKLVRLGHPARLLPQVLDSALDAQVLRGDNSGLANDIRK 304

Query: 598  EMKALNGKLLKTKDRNTKRDIRKELRTLSKEERKRQQLAVTDVIKSADVVLTTLTGASSH 419
            EMKALNGKLLKTKDRNT++DI++ELRTLSKEERKRQQLAVTDV+KSADV+LTTL GA S 
Sbjct: 305  EMKALNGKLLKTKDRNTRKDIQRELRTLSKEERKRQQLAVTDVLKSADVILTTLIGAFSK 364

Query: 418  KLESTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTIQSDEAARKGLGRTL 239
            KL+STSFDLVIIDEAAQALEIACWI LLKGSRC+LAGDHLQLPPTIQS EA +KGLGRTL
Sbjct: 365  KLDSTSFDLVIIDEAAQALEIACWIPLLKGSRCVLAGDHLQLPPTIQSVEAEKKGLGRTL 424

Query: 238  FERLAGLYGDEVMAMLTVQYRMHELIMEYSSKELYDSKVKAHSSVAAHMLYDLENVKRSS 59
            FERLA +YGDE+ +MLTVQYRMHELIM++SSKELY+SK+KAH SV AHMLYDLE VKR++
Sbjct: 425  FERLAEVYGDEITSMLTVQYRMHELIMDWSSKELYNSKIKAHPSVTAHMLYDLEGVKRTT 484

Query: 58   STEPTLLLIDIAGCDMEEK 2
            STEPTLLLID AGCDMEEK
Sbjct: 485  STEPTLLLIDTAGCDMEEK 503


>ref|XP_002308965.1| predicted protein [Populus trichocarpa] gi|222854941|gb|EEE92488.1|
            predicted protein [Populus trichocarpa]
          Length = 647

 Score =  800 bits (2067), Expect = 0.0
 Identities = 412/498 (82%), Positives = 449/498 (90%)
 Frame = -1

Query: 1495 KKKSSAPPISLDQFITTMSPLIDMEKXXXXXXXXXXXXSRNLDTAQKRGSTILNLKCVDA 1316
            K K  A  +SL +FI+  SPL+D+EK             RNLD+AQK+GSTILNLKCVDA
Sbjct: 5    KTKKKAAALSLQEFISITSPLLDLEKESEISASIGSGALRNLDSAQKKGSTILNLKCVDA 64

Query: 1315 QTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADVGSPSLGQGVVYRLKDSSITV 1136
            QTGLMGKTLLEFQS KGDVLPAHKFGTHDVVVLKPNKAD+GSP+LGQGVVYRLKDSSITV
Sbjct: 65   QTGLMGKTLLEFQSNKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSSITV 124

Query: 1135 AFEDIPEDGLNSTLRLEKVANEITFRRMKDTLIQLSKGVHKGPAADLVPVLFGERPPTVA 956
            AF+DIP++GLNS LRLEKVANE+T+RRMKD LIQLSKGVH+GPAADL+PVLFGER PT++
Sbjct: 125  AFDDIPDEGLNSPLRLEKVANEVTYRRMKDALIQLSKGVHRGPAADLIPVLFGERQPTMS 184

Query: 955  KKESSFTLFNSNLDHSQKDAISKALSSKNLFLLHXXXXXXXXXTVVEIILQEVKRGSKIL 776
            KK+ +FT  NS+LDHSQKDAISKALSSKN+FLLH         TVVEIILQEVKRGSKIL
Sbjct: 185  KKDVTFTPINSHLDHSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKIL 244

Query: 775  ACAASNIAVDNIVERLVPHRVKLVRLGHPARLLPQVLESALDAQVLRGDNSALANDIRKE 596
            ACAASNIAVDNIVERLVPHRVKLVRLGHPARLLPQVL+SALDAQVLRGDNSALANDIRKE
Sbjct: 245  ACAASNIAVDNIVERLVPHRVKLVRLGHPARLLPQVLDSALDAQVLRGDNSALANDIRKE 304

Query: 595  MKALNGKLLKTKDRNTKRDIRKELRTLSKEERKRQQLAVTDVIKSADVVLTTLTGASSHK 416
            MKALNGKLLKTKD++T+RDI+KELRTLSKEERKRQQLAV DVIK+ADVVLTTLTGA SHK
Sbjct: 305  MKALNGKLLKTKDKSTRRDIQKELRTLSKEERKRQQLAVIDVIKNADVVLTTLTGAFSHK 364

Query: 415  LESTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTIQSDEAARKGLGRTLF 236
            L +TSFDLVIIDEAAQALEI CW+ALLKGSRCILAGDHLQLPPTIQS EA +KGLGRTLF
Sbjct: 365  LNTTSFDLVIIDEAAQALEITCWLALLKGSRCILAGDHLQLPPTIQSVEAEKKGLGRTLF 424

Query: 235  ERLAGLYGDEVMAMLTVQYRMHELIMEYSSKELYDSKVKAHSSVAAHMLYDLENVKRSSS 56
            ERL  LYGDEV +MLTVQYRMHELIM +SSKELY+SK+KAH SVAAHML+DLE VKRSSS
Sbjct: 425  ERLTDLYGDEVTSMLTVQYRMHELIMNWSSKELYNSKIKAHPSVAAHMLFDLEGVKRSSS 484

Query: 55   TEPTLLLIDIAGCDMEEK 2
            TEPTLLL+DIAGCDMEEK
Sbjct: 485  TEPTLLLVDIAGCDMEEK 502


>emb|CAN80641.1| hypothetical protein VITISV_016912 [Vitis vinifera]
          Length = 649

 Score =  800 bits (2067), Expect = 0.0
 Identities = 421/501 (84%), Positives = 454/501 (90%), Gaps = 2/501 (0%)
 Frame = -1

Query: 1498 SKKKSSAPPISLDQFITTMSPLIDMEKXXXXXXXXXXXXS--RNLDTAQKRGSTILNLKC 1325
            S +KSSA  ISL QFI+T++PLID+EK               RNLDTAQKRGSTILNLKC
Sbjct: 6    SNRKSSA--ISLQQFISTIAPLIDLEKAHSHSLSNLCNSGSLRNLDTAQKRGSTILNLKC 63

Query: 1324 VDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADVGSPSLGQGVVYRLKDSS 1145
            VDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKAD+GSP+LGQGVVYRLKDSS
Sbjct: 64   VDAQTGLMGKTLLEFQSTKGDVLPAHKFGTHDVVVLKPNKADLGSPALGQGVVYRLKDSS 123

Query: 1144 ITVAFEDIPEDGLNSTLRLEKVANEITFRRMKDTLIQLSKGVHKGPAADLVPVLFGERPP 965
            ITVAF+DIPE+GLNS LRLEKVANE+T+RRMKD L+QLSKGVHKGPAADL+PVLFGERPP
Sbjct: 124  ITVAFDDIPEEGLNSPLRLEKVANEVTYRRMKDALVQLSKGVHKGPAADLIPVLFGERPP 183

Query: 964  TVAKKESSFTLFNSNLDHSQKDAISKALSSKNLFLLHXXXXXXXXXTVVEIILQEVKRGS 785
            TV+KK+ +FT FNSNLD SQKD ISKALSSKN+FLLH         TVVEIILQEVKRG+
Sbjct: 184  TVSKKDVTFTPFNSNLDRSQKDXISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGA 243

Query: 784  KILACAASNIAVDNIVERLVPHRVKLVRLGHPARLLPQVLESALDAQVLRGDNSALANDI 605
            KILACAASNIAVDNIVERLVP+RVKLVRLGHPARLLPQVLESALDAQVLRGDN+ LANDI
Sbjct: 244  KILACAASNIAVDNIVERLVPYRVKLVRLGHPARLLPQVLESALDAQVLRGDNTGLANDI 303

Query: 604  RKEMKALNGKLLKTKDRNTKRDIRKELRTLSKEERKRQQLAVTDVIKSADVVLTTLTGAS 425
            RKEMKALNGKLLKTKD+NT+RDIRKEL+TLSKEERKRQQLAVTDVIK+A+VVLTTLTGA 
Sbjct: 304  RKEMKALNGKLLKTKDKNTRRDIRKELKTLSKEERKRQQLAVTDVIKNANVVLTTLTGAV 363

Query: 424  SHKLESTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTIQSDEAARKGLGR 245
            S KLE+ SFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTIQS EA +KGLGR
Sbjct: 364  SRKLENISFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTIQSVEAEKKGLGR 423

Query: 244  TLFERLAGLYGDEVMAMLTVQYRMHELIMEYSSKELYDSKVKAHSSVAAHMLYDLENVKR 65
            TLFERLA LYGDEVM+MLTVQYRMHELIM +SSKELY+SK+ AH SVAAHML DLE+VK+
Sbjct: 424  TLFERLADLYGDEVMSMLTVQYRMHELIMNWSSKELYNSKITAHPSVAAHMLSDLEDVKK 483

Query: 64   SSSTEPTLLLIDIAGCDMEEK 2
            SSSTE TLLLID AGCDMEEK
Sbjct: 484  SSSTESTLLLIDTAGCDMEEK 504


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