BLASTX nr result

ID: Coptis23_contig00013301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013301
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62076.1| hypothetical protein VITISV_015538 [Vitis vinifera]    58   9e-07
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]    58   9e-07
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]    55   6e-06
emb|CAN77498.1| hypothetical protein VITISV_042223 [Vitis vinifera]    55   8e-06

>emb|CAN62076.1| hypothetical protein VITISV_015538 [Vitis vinifera]
          Length = 313

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/38 (68%), Positives = 34/38 (89%)
 Frame = +1

Query: 1   AIDFVRSKENLADPLTKGLARELVFSTSRGMGLKSIKD 114
           ++D+V+SK+N+ADPLTKGL RELV  +SRGMGLK IK+
Sbjct: 276 SVDYVKSKDNIADPLTKGLNRELVEKSSRGMGLKPIKE 313


>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
          Length = 1096

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/38 (68%), Positives = 34/38 (89%)
 Frame = +1

Query: 1    AIDFVRSKENLADPLTKGLARELVFSTSRGMGLKSIKD 114
            ++D+V+SK+N+ADPLTKGL RELV  +SRGMGLK IK+
Sbjct: 1059 SVDYVKSKDNIADPLTKGLNRELVEKSSRGMGLKPIKE 1096


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/38 (65%), Positives = 33/38 (86%)
 Frame = +1

Query: 1    AIDFVRSKENLADPLTKGLARELVFSTSRGMGLKSIKD 114
            ++D+V+SK+N+ADPLTKGL RELV  +SRGM LK IK+
Sbjct: 1240 SVDYVKSKDNIADPLTKGLNRELVEKSSRGMXLKPIKE 1277


>emb|CAN77498.1| hypothetical protein VITISV_042223 [Vitis vinifera]
          Length = 429

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/35 (74%), Positives = 30/35 (85%)
 Frame = +1

Query: 7   DFVRSKENLADPLTKGLARELVFSTSRGMGLKSIK 111
           DFV+SK+N+ADPLTKGL RE V  T+RGMGLK IK
Sbjct: 395 DFVKSKDNIADPLTKGLYREQVVVTTRGMGLKPIK 429


Top