BLASTX nr result

ID: Coptis23_contig00013298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013298
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237046.1| uncharacterized protein LOC100527252 [Glycin...    94   1e-17
ref|XP_002273167.1| PREDICTED: vesicle-associated membrane prote...    93   2e-17
ref|XP_002273101.1| PREDICTED: vesicle-associated membrane prote...    93   2e-17
sp|O23429.2|VA724_ARATH RecName: Full=Vesicle-associated membran...    92   3e-17
ref|XP_003533403.1| PREDICTED: vesicle-associated membrane prote...    92   3e-17

>ref|NP_001237046.1| uncharacterized protein LOC100527252 [Glycine max]
           gi|255631884|gb|ACU16309.1| unknown [Glycine max]
          Length = 221

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 43/69 (62%), Positives = 51/69 (73%)
 Frame = +3

Query: 3   ALDRGERLDILAEKTEDLRSQAQEFKKQGTQVRRKMWFKNMKIKXXXXXXXXXXXXXXWV 182
           A+DRGE L ILA+KTE LRSQAQ+F+KQGTQVRRKMW++NMKIK              W+
Sbjct: 152 AIDRGENLTILADKTETLRSQAQDFRKQGTQVRRKMWYQNMKIKLVVLGILLFLVLVIWL 211

Query: 183 SVCNGFDCT 209
           S+C GFDCT
Sbjct: 212 SICGGFDCT 220


>ref|XP_002273167.1| PREDICTED: vesicle-associated membrane protein 724 isoform 2 [Vitis
           vinifera]
          Length = 229

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 43/68 (63%), Positives = 52/68 (76%)
 Frame = +3

Query: 6   LDRGERLDILAEKTEDLRSQAQEFKKQGTQVRRKMWFKNMKIKXXXXXXXXXXXXXXWVS 185
           L+RGE L ILA+KTEDLRSQAQ+FKKQG+QVRRKMWF+NMKIK              WVS
Sbjct: 161 LERGENLTILADKTEDLRSQAQQFKKQGSQVRRKMWFQNMKIKLVVLGILLILALVIWVS 220

Query: 186 VCNGFDCT 209
           +C+GF+C+
Sbjct: 221 ICHGFNCS 228


>ref|XP_002273101.1| PREDICTED: vesicle-associated membrane protein 724 isoform 1 [Vitis
           vinifera] gi|297736869|emb|CBI26070.3| unnamed protein
           product [Vitis vinifera]
          Length = 221

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 43/68 (63%), Positives = 52/68 (76%)
 Frame = +3

Query: 6   LDRGERLDILAEKTEDLRSQAQEFKKQGTQVRRKMWFKNMKIKXXXXXXXXXXXXXXWVS 185
           L+RGE L ILA+KTEDLRSQAQ+FKKQG+QVRRKMWF+NMKIK              WVS
Sbjct: 153 LERGENLTILADKTEDLRSQAQQFKKQGSQVRRKMWFQNMKIKLVVLGILLILALVIWVS 212

Query: 186 VCNGFDCT 209
           +C+GF+C+
Sbjct: 213 ICHGFNCS 220


>sp|O23429.2|VA724_ARATH RecName: Full=Vesicle-associated membrane protein 724;
           Short=AtVAMP724; AltName: Full=SYBL1-like protein
           gi|48310135|gb|AAT41760.1| At4g15780 [Arabidopsis
           thaliana] gi|50198886|gb|AAT70463.1| At4g15780
           [Arabidopsis thaliana]
          Length = 222

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 41/69 (59%), Positives = 52/69 (75%)
 Frame = +3

Query: 3   ALDRGERLDILAEKTEDLRSQAQEFKKQGTQVRRKMWFKNMKIKXXXXXXXXXXXXXXWV 182
           A+DRGE L +L +KTE+LRSQAQE+KKQGTQVRRK+W++NMKIK              W+
Sbjct: 153 AIDRGENLTVLTDKTENLRSQAQEYKKQGTQVRRKLWYQNMKIKLVVLGILLLLVLIIWI 212

Query: 183 SVCNGFDCT 209
           SVC+GF+CT
Sbjct: 213 SVCHGFNCT 221


>ref|XP_003533403.1| PREDICTED: vesicle-associated membrane protein 724-like [Glycine
           max]
          Length = 223

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/69 (62%), Positives = 50/69 (72%)
 Frame = +3

Query: 3   ALDRGERLDILAEKTEDLRSQAQEFKKQGTQVRRKMWFKNMKIKXXXXXXXXXXXXXXWV 182
           ALDRGE L ILA+KTE LRS AQ+F+KQGTQVRRKMW++NMKIK              W+
Sbjct: 152 ALDRGENLTILADKTEALRSHAQDFRKQGTQVRRKMWYQNMKIKLVVLGILLVLVLVIWL 211

Query: 183 SVCNGFDCT 209
           S+C GFDCT
Sbjct: 212 SICGGFDCT 220


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