BLASTX nr result

ID: Coptis23_contig00013293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013293
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26081.3| unnamed protein product [Vitis vinifera]              197   7e-49
ref|XP_002276207.1| PREDICTED: isoleucyl-tRNA synthetase-like [V...   197   7e-49
emb|CAN78050.1| hypothetical protein VITISV_015862 [Vitis vinifera]   197   7e-49
ref|XP_002314391.1| predicted protein [Populus trichocarpa] gi|2...   187   1e-45
ref|XP_002516921.1| isoleucyl tRNA synthetase, putative [Ricinus...   184   9e-45

>emb|CBI26081.3| unnamed protein product [Vitis vinifera]
          Length = 1221

 Score =  197 bits (501), Expect = 7e-49
 Identities = 95/130 (73%), Positives = 113/130 (86%), Gaps = 1/130 (0%)
 Frame = +2

Query: 2    ETARSGKLIGSSLDAKIYLHSSDADLSSKLHETCASSNDADELHRIFITSQVEILSSMGN 181
            E AR GKLIGSSLDAK+YLH+SDA L+ +L E C+++NDAD LHRIFITSQVEILSS+ +
Sbjct: 1092 EVARGGKLIGSSLDAKVYLHASDASLAPRLQEMCSTNNDADTLHRIFITSQVEILSSLDD 1151

Query: 182  GIAESIPYSGDCLIQGK-KVWVGVSRADGSKCERCWNYSTKVGSFSEHPTLCSRCYNVVG 358
             + ++IPY+G+ LIQGK K+W+GVSRADGSKCERCWNYS +VGSFSEHPTLC RCYNVV 
Sbjct: 1152 ELVKNIPYTGEYLIQGKNKIWIGVSRADGSKCERCWNYSLQVGSFSEHPTLCGRCYNVVN 1211

Query: 359  VQPLPVVAAV 388
            VQ LP +AAV
Sbjct: 1212 VQ-LPAMAAV 1220


>ref|XP_002276207.1| PREDICTED: isoleucyl-tRNA synthetase-like [Vitis vinifera]
          Length = 1105

 Score =  197 bits (501), Expect = 7e-49
 Identities = 95/130 (73%), Positives = 113/130 (86%), Gaps = 1/130 (0%)
 Frame = +2

Query: 2    ETARSGKLIGSSLDAKIYLHSSDADLSSKLHETCASSNDADELHRIFITSQVEILSSMGN 181
            E AR GKLIGSSLDAK+YLH+SDA L+ +L E C+++NDAD LHRIFITSQVEILSS+ +
Sbjct: 976  EVARGGKLIGSSLDAKVYLHASDASLAPRLQEMCSTNNDADTLHRIFITSQVEILSSLDD 1035

Query: 182  GIAESIPYSGDCLIQGK-KVWVGVSRADGSKCERCWNYSTKVGSFSEHPTLCSRCYNVVG 358
             + ++IPY+G+ LIQGK K+W+GVSRADGSKCERCWNYS +VGSFSEHPTLC RCYNVV 
Sbjct: 1036 ELVKNIPYTGEYLIQGKNKIWIGVSRADGSKCERCWNYSLQVGSFSEHPTLCGRCYNVVN 1095

Query: 359  VQPLPVVAAV 388
            VQ LP +AAV
Sbjct: 1096 VQ-LPAMAAV 1104


>emb|CAN78050.1| hypothetical protein VITISV_015862 [Vitis vinifera]
          Length = 1088

 Score =  197 bits (501), Expect = 7e-49
 Identities = 95/130 (73%), Positives = 113/130 (86%), Gaps = 1/130 (0%)
 Frame = +2

Query: 2    ETARSGKLIGSSLDAKIYLHSSDADLSSKLHETCASSNDADELHRIFITSQVEILSSMGN 181
            E AR GKLIGSSLDAK+YLH+SDA L+ +L E C+++NDAD LHRIFITSQVEILSS+ +
Sbjct: 959  EVARGGKLIGSSLDAKVYLHASDASLAPRLREMCSTNNDADTLHRIFITSQVEILSSLDD 1018

Query: 182  GIAESIPYSGDCLIQGK-KVWVGVSRADGSKCERCWNYSTKVGSFSEHPTLCSRCYNVVG 358
             + ++IPY+G+ LIQGK K+W+GVSRADGSKCERCWNYS +VGSFSEHPTLC RCYNVV 
Sbjct: 1019 ELVKNIPYTGEYLIQGKNKIWIGVSRADGSKCERCWNYSLQVGSFSEHPTLCGRCYNVVN 1078

Query: 359  VQPLPVVAAV 388
            VQ LP +AAV
Sbjct: 1079 VQ-LPAMAAV 1087


>ref|XP_002314391.1| predicted protein [Populus trichocarpa] gi|222863431|gb|EEF00562.1|
            predicted protein [Populus trichocarpa]
          Length = 981

 Score =  187 bits (474), Expect = 1e-45
 Identities = 87/129 (67%), Positives = 108/129 (83%), Gaps = 1/129 (0%)
 Frame = +2

Query: 2    ETARSGKLIGSSLDAKIYLHSSDADLSSKLHETCASSNDADELHRIFITSQVEILSSMGN 181
            E AR+GKLIGSSL+AK+YLH+SDA L+S+LHE C +SNDAD LHRIFITSQ E+L  + +
Sbjct: 851  EVARTGKLIGSSLEAKVYLHASDASLASRLHEMCTASNDADALHRIFITSQAEMLHHVED 910

Query: 182  GIAESIPYSGDCLIQG-KKVWVGVSRADGSKCERCWNYSTKVGSFSEHPTLCSRCYNVVG 358
             + ++IPYSG+ LIQG ++VW+GVSRA+G KCERCWNY+ +VGSF EHPTLC RCY VV 
Sbjct: 911  EVLKAIPYSGEYLIQGSERVWIGVSRAEGLKCERCWNYTPQVGSFVEHPTLCGRCYKVVA 970

Query: 359  VQPLPVVAA 385
            VQP P V+A
Sbjct: 971  VQPEPAVSA 979


>ref|XP_002516921.1| isoleucyl tRNA synthetase, putative [Ricinus communis]
            gi|223544009|gb|EEF45535.1| isoleucyl tRNA synthetase,
            putative [Ricinus communis]
          Length = 1102

 Score =  184 bits (466), Expect = 9e-45
 Identities = 84/130 (64%), Positives = 106/130 (81%), Gaps = 1/130 (0%)
 Frame = +2

Query: 2    ETARSGKLIGSSLDAKIYLHSSDADLSSKLHETCASSNDADELHRIFITSQVEILSSMGN 181
            E AR GKLIGSSL+AK+YL++SDA L+SK HE CA+SNDAD LHRIFITSQVE++  +  
Sbjct: 972  EAARMGKLIGSSLEAKVYLYASDARLASKFHEICAASNDADPLHRIFITSQVEVIELLNE 1031

Query: 182  GIAESIPYSGDCLIQ-GKKVWVGVSRADGSKCERCWNYSTKVGSFSEHPTLCSRCYNVVG 358
             + E+IP++G+ LI+ G +VW+GVSRA+G KCERCWNY+  VGSF EHPTLC RCY +V 
Sbjct: 1032 KLIETIPHAGEFLIEGGNRVWIGVSRAEGMKCERCWNYTADVGSFVEHPTLCGRCYRIVA 1091

Query: 359  VQPLPVVAAV 388
            +QP P VAA+
Sbjct: 1092 MQPEPAVAAI 1101


Top