BLASTX nr result
ID: Coptis23_contig00013285
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00013285
(1845 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat an... 684 0.0
emb|CBI15364.3| unnamed protein product [Vitis vinifera] 681 0.0
ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding... 611 e-172
tpg|DAA60731.1| TPA: hypothetical protein ZEAMMB73_358002 [Zea m... 597 e-168
gb|EEC84140.1| hypothetical protein OsI_30493 [Oryza sativa Indi... 592 e-166
>ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat and HMG-box DNA-binding
protein 1-like [Vitis vinifera]
Length = 965
Score = 684 bits (1766), Expect = 0.0
Identities = 358/549 (65%), Positives = 424/549 (77%), Gaps = 10/549 (1%)
Frame = -2
Query: 1844 STPIQTGKRHFLCYNMLGSITTIENEGYSHIEVDFHDTGRGPRVPSMTDYFGFTMASLNE 1665
+TP+Q GKR FLCYNMLGSITTIE++GYSHIE+DFHDTG GPRVP+MTDYFGFTMASLNE
Sbjct: 426 ATPVQPGKRRFLCYNMLGSITTIEHDGYSHIEIDFHDTGSGPRVPAMTDYFGFTMASLNE 485
Query: 1664 SGSVFANPCKGEKNMSTLMYRPFSSWANNSEWSMRFEAEEVKVVALGAGWIAAATSLNFL 1485
GSVFANPCKGEKNMSTLMYRPFS+WANNSEWSMRFE EEVKVVALG+ W+AA TSLNFL
Sbjct: 486 HGSVFANPCKGEKNMSTLMYRPFSTWANNSEWSMRFEQEEVKVVALGSAWVAAVTSLNFL 545
Query: 1484 RIFTEGGLQRHVLSLDGPVVTAAGFKDELAVVTHASHSLPSNDQMLEFRVLNISNGTQPL 1305
RIFT+GGLQR+V+SLDGPVVTA+GFKDELAVVTHASH LPSNDQML+FRV NISNGTQPL
Sbjct: 546 RIFTDGGLQRYVISLDGPVVTASGFKDELAVVTHASHCLPSNDQMLKFRVFNISNGTQPL 605
Query: 1304 RGHLPLTPGSCLSWFGFTEEGQLSSYDSEGTLRVFTNQYGGSWIPLLSASKEKKSDESYW 1125
+GH+PLTPGSCL+WFGF+EEGQLSSYDS+G LRVFTNQ+GGSW+PL SASKE KS+E+YW
Sbjct: 606 KGHVPLTPGSCLTWFGFSEEGQLSSYDSKGVLRVFTNQFGGSWLPLFSASKE-KSEENYW 664
Query: 1124 MVGLNASKVFCIVCRTPDLYPPVMPKPVLTLLGLSIPLASSDLGADDLEKEFILSNLNLT 945
+ GLN +K+FCIVC++PDL+PPVMPKPVLTLL LS PLA+SDLGA+ LE EFIL N++L
Sbjct: 665 VAGLNMNKLFCIVCKSPDLFPPVMPKPVLTLLDLSFPLATSDLGAETLENEFILKNMHLL 724
Query: 944 QAEKKIEELAAAGLDTSSQDKEAFDLEFSLDKCILRLIAACCNGDKLVRATELVRLLSSE 765
Q +++IEE+AAAGLDT+S D EAF++E +LD+CILRLIA+CCNGDK+VRATELV+LLS E
Sbjct: 725 QIQQRIEEMAAAGLDTTSLDDEAFNVETALDRCILRLIASCCNGDKIVRATELVKLLSLE 784
Query: 764 KSVKTAINLVSKLKLPVLAERFSGILEERLLKETV-GAAAPFSLSNEALAHGAEVNKLEW 588
KSVK AI LV+ LKLP LAERF+ ILEERLL ET A P + SN + +V ++
Sbjct: 785 KSVKGAIKLVTALKLPNLAERFNSILEERLLNETSRPATLPLTSSNHDASTTPDVVMSKF 844
Query: 587 V----QTKVPEAEIALPPPKFSSTQLLKQGXXXXXXXXXXXXXSN----ITRVEGNMKDQ 432
+ +K + I LP P+ SS K+G I G +K
Sbjct: 845 LTSIQSSKPSQPVIPLPSPQLSSPLFAKKGKLQEGAKVGNEKVEQRRTAIVENIGKVKSL 904
Query: 431 ANCEKLHLPANTIPKXXXXXXXXXXXXLTKTDINDGASETQTIRPSNPFAKALSNQ-TSS 255
A + + N + +I +GA RPSNPFAK+ SNQ SS
Sbjct: 905 AEVKSIEDVTN-------------QGEASIGEIKNGAVNQ---RPSNPFAKSSSNQEKSS 948
Query: 254 VFDSIKKMK 228
+FD+IKKMK
Sbjct: 949 LFDAIKKMK 957
>emb|CBI15364.3| unnamed protein product [Vitis vinifera]
Length = 1427
Score = 681 bits (1758), Expect = 0.0
Identities = 357/549 (65%), Positives = 423/549 (77%), Gaps = 10/549 (1%)
Frame = -2
Query: 1844 STPIQTGKRHFLCYNMLGSITTIENEGYSHIEVDFHDTGRGPRVPSMTDYFGFTMASLNE 1665
+TP+Q GKR FLCYNMLGSITTIE++GYSHIE +FHDTG GPRVP+MTDYFGFTMASLNE
Sbjct: 387 ATPVQPGKRRFLCYNMLGSITTIEHDGYSHIEANFHDTGSGPRVPAMTDYFGFTMASLNE 446
Query: 1664 SGSVFANPCKGEKNMSTLMYRPFSSWANNSEWSMRFEAEEVKVVALGAGWIAAATSLNFL 1485
GSVFANPCKGEKNMSTLMYRPFS+WANNSEWSMRFE EEVKVVALG+ W+AA TSLNFL
Sbjct: 447 HGSVFANPCKGEKNMSTLMYRPFSTWANNSEWSMRFEQEEVKVVALGSAWVAAVTSLNFL 506
Query: 1484 RIFTEGGLQRHVLSLDGPVVTAAGFKDELAVVTHASHSLPSNDQMLEFRVLNISNGTQPL 1305
RIFT+GGLQR+V+SLDGPVVTA+GFKDELAVVTHASH LPSNDQML+FRV NISNGTQPL
Sbjct: 507 RIFTDGGLQRYVISLDGPVVTASGFKDELAVVTHASHCLPSNDQMLKFRVFNISNGTQPL 566
Query: 1304 RGHLPLTPGSCLSWFGFTEEGQLSSYDSEGTLRVFTNQYGGSWIPLLSASKEKKSDESYW 1125
+GH+PLTPGSCL+WFGF+EEGQLSSYDS+G LRVFTNQ+GGSW+PL SASKE KS+E+YW
Sbjct: 567 KGHVPLTPGSCLTWFGFSEEGQLSSYDSKGVLRVFTNQFGGSWLPLFSASKE-KSEENYW 625
Query: 1124 MVGLNASKVFCIVCRTPDLYPPVMPKPVLTLLGLSIPLASSDLGADDLEKEFILSNLNLT 945
+ GLN +K+FCIVC++PDL+PPVMPKPVLTLL LS PLA+SDLGA+ LE EFIL N++L
Sbjct: 626 VAGLNMNKLFCIVCKSPDLFPPVMPKPVLTLLDLSFPLATSDLGAETLENEFILKNMHLL 685
Query: 944 QAEKKIEELAAAGLDTSSQDKEAFDLEFSLDKCILRLIAACCNGDKLVRATELVRLLSSE 765
Q +++IEE+AAAGLDT+S D EAF++E +LD+CILRLIA+CCNGDK+VRATELV+LLS E
Sbjct: 686 QIQQRIEEMAAAGLDTTSLDDEAFNVETALDRCILRLIASCCNGDKIVRATELVKLLSLE 745
Query: 764 KSVKTAINLVSKLKLPVLAERFSGILEERLLKETV-GAAAPFSLSNEALAHGAEVNKLEW 588
KSVK AI LV+ LKLP LAERF+ ILEERLL ET A P + SN + +V ++
Sbjct: 746 KSVKGAIKLVTALKLPNLAERFNSILEERLLNETSRPATLPLTSSNHDASTTPDVVMSKF 805
Query: 587 V----QTKVPEAEIALPPPKFSSTQLLKQGXXXXXXXXXXXXXSN----ITRVEGNMKDQ 432
+ +K + I LP P+ SS K+G I G +K
Sbjct: 806 LTSIQSSKPSQPVIPLPSPQLSSPLFAKKGKLQEGAKVGNEKVEQRRTAIVENIGKVKSL 865
Query: 431 ANCEKLHLPANTIPKXXXXXXXXXXXXLTKTDINDGASETQTIRPSNPFAKALSNQ-TSS 255
A + + N + +I +GA RPSNPFAK+ SNQ SS
Sbjct: 866 AEVKSIEDVTN-------------QGEASIGEIKNGAVNQ---RPSNPFAKSSSNQEKSS 909
Query: 254 VFDSIKKMK 228
+FD+IKKMK
Sbjct: 910 LFDAIKKMK 918
>ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like [Cucumis
sativus] gi|449477125|ref|XP_004154937.1| PREDICTED: WD
repeat and HMG-box DNA-binding protein 1-like [Cucumis
sativus]
Length = 962
Score = 611 bits (1576), Expect = e-172
Identities = 292/396 (73%), Positives = 345/396 (87%)
Frame = -2
Query: 1844 STPIQTGKRHFLCYNMLGSITTIENEGYSHIEVDFHDTGRGPRVPSMTDYFGFTMASLNE 1665
+TP+Q GK+ FLCYNMLGSITT E++GYSHIE+DFHDTG GPRVPSM D+FGFTMA+L+E
Sbjct: 432 ATPLQPGKKRFLCYNMLGSITTFEHDGYSHIEIDFHDTGSGPRVPSMNDHFGFTMAALDE 491
Query: 1664 SGSVFANPCKGEKNMSTLMYRPFSSWANNSEWSMRFEAEEVKVVALGAGWIAAATSLNFL 1485
+GSVFANPCKGEKNMSTLMYRPF SWANNSEWSMRF+ EEVKVVA+G+ W+AA TSL++L
Sbjct: 492 NGSVFANPCKGEKNMSTLMYRPFGSWANNSEWSMRFDGEEVKVVAIGSRWVAAFTSLSYL 551
Query: 1484 RIFTEGGLQRHVLSLDGPVVTAAGFKDELAVVTHASHSLPSNDQMLEFRVLNISNGTQPL 1305
R+FT+GGLQ+H+LSLDGPVVTA+GFKDELA VTH+S LPSNDQ+LEFR+LNISNGTQ L
Sbjct: 552 RVFTDGGLQKHILSLDGPVVTASGFKDELAFVTHSSTCLPSNDQVLEFRILNISNGTQLL 611
Query: 1304 RGHLPLTPGSCLSWFGFTEEGQLSSYDSEGTLRVFTNQYGGSWIPLLSASKEKKSDESYW 1125
RG LPLTPGS L+WFGF+EEG+LSSYDS+G LRVFTNQYGGSW+PL SASKE+KSDE+YW
Sbjct: 612 RGRLPLTPGSYLTWFGFSEEGKLSSYDSKGVLRVFTNQYGGSWVPLFSASKERKSDENYW 671
Query: 1124 MVGLNASKVFCIVCRTPDLYPPVMPKPVLTLLGLSIPLASSDLGADDLEKEFILSNLNLT 945
+ GLNA+K+FC++C+ PD YP V PKPVLTLL LS PLA SDLGA+ LE EF+++++ L
Sbjct: 672 VAGLNANKLFCVICKNPDSYPQVTPKPVLTLLNLSFPLALSDLGAEALENEFMMNDMYLK 731
Query: 944 QAEKKIEELAAAGLDTSSQDKEAFDLEFSLDKCILRLIAACCNGDKLVRATELVRLLSSE 765
Q +EE+A GL + D EAF +E + D+CILRLIA+CCNGDKLVRATELV+LLS E
Sbjct: 732 QIHGTMEEMALRGLYDTELDDEAFSIEAAQDRCILRLIASCCNGDKLVRATELVKLLSLE 791
Query: 764 KSVKTAINLVSKLKLPVLAERFSGILEERLLKETVG 657
KSVK AI LV+ LKLP LAERF+ ILEERLL ET G
Sbjct: 792 KSVKGAIKLVTALKLPNLAERFNAILEERLLNETKG 827
>tpg|DAA60731.1| TPA: hypothetical protein ZEAMMB73_358002 [Zea mays]
Length = 979
Score = 597 bits (1539), Expect = e-168
Identities = 314/552 (56%), Positives = 394/552 (71%), Gaps = 11/552 (1%)
Frame = -2
Query: 1844 STPIQTGKRHFLCYNMLGSITTIENEGYSHIEVDFHDTGRGPRVPSMTDYFGFTMASLNE 1665
STP Q G R+FL YNMLGSITTI+NEGYSH+EVDFHDTGRGPRVPSMTDYFGFTMA++N
Sbjct: 432 STPPQPGMRNFLAYNMLGSITTIQNEGYSHVEVDFHDTGRGPRVPSMTDYFGFTMAAMNG 491
Query: 1664 SGSVFANPCKGEKNMSTLMYRPFSSWANNSEWSMRFEAEEVKVVALGAGWIAAATSLNFL 1485
SGSVFANPCKG+KNMSTLMYRPF SWA NSEWSMRFE EEVK +ALGAGW+AA TSLNFL
Sbjct: 492 SGSVFANPCKGDKNMSTLMYRPFGSWAGNSEWSMRFEGEEVKALALGAGWVAAVTSLNFL 551
Query: 1484 RIFTEGGLQRHVLSLDGPVVTAAGFKDELAVVTHASHSLPSNDQMLEFRVLNISNGTQPL 1305
RIFTEGGLQ H+LS+ GPVVTAAG++D+LA+V+HAS LPS DQ+L+ +V NIS GTQ +
Sbjct: 552 RIFTEGGLQMHILSVSGPVVTAAGYEDQLAIVSHASDCLPSGDQVLDVKVFNISEGTQSM 611
Query: 1304 RGHLPLTPGSCLSWFGFTEEGQLSSYDSEGTLRVFTNQYGGSWIPLLSASKEKKS-DESY 1128
G L LTP S LSWFGF+E GQLSSYDS+G LRVF+NQ+GGSW+PL S+ K +KS DES+
Sbjct: 612 SGRLVLTPLSRLSWFGFSENGQLSSYDSKGILRVFSNQFGGSWLPLFSSVKARKSEDESH 671
Query: 1127 WMVGLNASKVFCIVCRTPDLYPPVMPKPVLTLLGLSIPLASSDLGADDLEKEFILSNLNL 948
W+VGL+A+ +FCI+C+TP YP VMPKPVL++L LS PLASSDLGA+ LE EF++ L L
Sbjct: 672 WVVGLDANNIFCILCKTPQSYPQVMPKPVLSILELSFPLASSDLGANSLENEFLMRKLQL 731
Query: 947 TQAEKKIEELAAAGLDTSSQDKEAFDLEFSLDKCILRLIAACCNGDKLVRATELVRLLSS 768
+Q + K+EE+AA GLDT+S D E+F++E LD+CILRLI++CC+GDKLVRA+EL RLL
Sbjct: 732 SQIQNKMEEMAALGLDTTSYDDESFNMEAGLDRCILRLISSCCSGDKLVRASELARLLKL 791
Query: 767 EKSVKTAINLVSKLKLPVLAERFSGILEERLLKETVGAAAPFSLSNEALAHGAEVNKLE- 591
EKS+K A++LV++LKLP+L E+FS I+EER+L + + A A SN + V +
Sbjct: 792 EKSMKGALSLVTRLKLPMLQEKFSSIIEERVLNDKIIAGAGGFCSNATIMTNTPVLTTQA 851
Query: 590 -----WVQTKVPEAEIALPPPKFSSTQLLKQGXXXXXXXXXXXXXSNITRVEGNMKDQAN 426
++Q E +LP + Q I + KD +
Sbjct: 852 TLPSMFMQDGNRSLESSLPKLNIVNQQ------CNSTEPKKPAGERGIEIKDRTQKDSS- 904
Query: 425 CEKLHLPANTIPKXXXXXXXXXXXXLT--KTDINDGASETQTIRPSNPFAKALSN--QTS 258
+P +PK T K + + + RP NPFAK+ S+ Q+S
Sbjct: 905 ---ASVPFAKVPKNSENQNQEGGIDHTGAKKESTKYCNRAEPQRPVNPFAKSSSSKEQSS 961
Query: 257 SVFDSIKKMKAK 222
S+ DSIKKMK +
Sbjct: 962 SLLDSIKKMKVE 973
>gb|EEC84140.1| hypothetical protein OsI_30493 [Oryza sativa Indica Group]
Length = 1019
Score = 592 bits (1526), Expect = e-166
Identities = 320/574 (55%), Positives = 394/574 (68%), Gaps = 32/574 (5%)
Frame = -2
Query: 1844 STPIQTGKRHFLCYNMLGSITTIENEGYSHIEVDFHDTGRGPRVPSMTDYFGFTMASLNE 1665
STP Q GKR+FL YNMLGSITTIENEG+SH+EVDFHDTGRGPRVPSMTDYFGFTMA+LNE
Sbjct: 445 STPPQPGKRNFLAYNMLGSITTIENEGHSHVEVDFHDTGRGPRVPSMTDYFGFTMAALNE 504
Query: 1664 SGSVFANPCKGEKNMSTLMYRPFSSWANNSEWSMRFEAEEVKVVALGAGWIAAATSLNFL 1485
SGSVFANPCKG+KNMSTLMYRPFSSWA NSEWSMRFE EEVK VA+G GW+AA T+LNFL
Sbjct: 505 SGSVFANPCKGDKNMSTLMYRPFSSWAGNSEWSMRFEGEEVKAVAVGVGWVAAVTTLNFL 564
Query: 1484 RIFTEGGLQRHVLSLDGPVVTAAGFKDELAVVTHASHSLPSNDQMLEFRVLNISNGTQPL 1305
RIFTEGGLQ H+LS+ GPVVTAAG D+LA+V+HAS L S DQ+L+ +VL IS Q L
Sbjct: 565 RIFTEGGLQMHILSVGGPVVTAAGHGDQLAIVSHASDCLSSGDQVLDVKVLKISECAQSL 624
Query: 1304 RGHLPLTPGSCLSWFGFTEEGQLSSYDSEGTLRVFTNQYGGSWIPLLSASKEKKS-DESY 1128
L LTP S LSWFGF+E G+LSS+DS+G LRVF+ Q+GGSWIP+ S+ K +KS DES+
Sbjct: 625 SSRLVLTPASKLSWFGFSENGELSSFDSKGILRVFSGQFGGSWIPIFSSIKARKSEDESH 684
Query: 1127 WMVGLNASKVFCIVCRTPDLYPPVMPKPVLTLLGLSIPLASSDLGADDLEKEFILSNLNL 948
W+VGL+A+ +FCI+C++P+ YP VMPKPVLT+L LS PLASSDLGA+ LE EF++ L+L
Sbjct: 685 WVVGLDANNIFCILCKSPESYPQVMPKPVLTILELSFPLASSDLGANSLETEFMMRKLHL 744
Query: 947 TQAEKKIEELAAAGLDTSSQDKEAFDLEFSLDKCILRLIAACCNGDKLVRATELVRLLSS 768
+Q +KKIEE+AA GLDT + D EAF++E +LD+CILRLI++CCNGDKLVRATEL +LL+
Sbjct: 745 SQIQKKIEEMAALGLDTIALDDEAFNMEAALDRCILRLISSCCNGDKLVRATELAKLLTL 804
Query: 767 EKSVKTAINLVSKLKLPVLAERFSGILEERLLK--ETVGAAAPFSLSNEALAHGAEVNKL 594
EKS+K A+ LV++LKLP+L ERFS ILEE +L + + FS SN + ++
Sbjct: 805 EKSMKGALMLVTRLKLPILQERFSAILEEMMLNNAKIANTSGVFSNSNTNYSPSPALS-- 862
Query: 593 EWVQTKVPEAEIALPPPKFSSTQLLKQGXXXXXXXXXXXXXSNITRVEGNMKDQANCEKL 414
VP A++ L K + + + + +
Sbjct: 863 ---TQAVPPAKVVQNGNSLKLPTLPKLNPAAQRSNPTESNKAEVEQADNLKEISTKVSPA 919
Query: 413 HLPANTIPKXXXXXXXXXXXXLTKTDINDGASETQTI----------------------- 303
P IPK TK D NDGAS T+
Sbjct: 920 QTPLVKIPK------NSEMGVKTKKD-NDGASHATTVDQNPKGGSGQVGLKNKSVDSCNG 972
Query: 302 ----RPSNPFAKALSN--QTSSVFDSIKKMKAKN 219
RP NPFAK+ S+ Q SS+FDSIKKMK +N
Sbjct: 973 VQPQRPVNPFAKSSSSKEQPSSLFDSIKKMKVEN 1006