BLASTX nr result
ID: Coptis23_contig00013271
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00013271
(1304 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002302481.1| predicted protein [Populus trichocarpa] gi|2... 517 e-144
ref|XP_002265256.2| PREDICTED: nucleolar GTP-binding protein 1-l... 509 e-142
emb|CBI39064.3| unnamed protein product [Vitis vinifera] 509 e-142
ref|XP_002526509.1| nucleolar GTP-binding protein, putative [Ric... 488 e-135
ref|XP_004164807.1| PREDICTED: nucleolar GTP-binding protein 1-l... 478 e-132
>ref|XP_002302481.1| predicted protein [Populus trichocarpa] gi|222844207|gb|EEE81754.1|
predicted protein [Populus trichocarpa]
Length = 356
Score = 517 bits (1332), Expect = e-144
Identities = 258/345 (74%), Positives = 293/345 (84%)
Frame = -1
Query: 1304 VKPPLDILYSALRKAKKVPASKGISNIAKRERNRGAKQLDALMKELAIPLREYMDNFPNK 1125
V P +DILYSALRKAK+VP +KGI+NIAKRERNRGAKQLDALMKELA+PLREYM+NFP K
Sbjct: 2 VMPSVDILYSALRKAKRVPPTKGIANIAKRERNRGAKQLDALMKELAVPLREYMENFPKK 61
Query: 1124 KHLHPYERSLIELTLGDGNYXXXXXXXXXXXXXXXXXXXEQASLCAKCLTKRDAEERLNE 945
K+LHPYERSLIELTLGDGNY E ASLCAK TKRDA ERLNE
Sbjct: 62 KYLHPYERSLIELTLGDGNYEEVLRKVDALRKKVVGVGKECASLCAKSSTKRDAGERLNE 121
Query: 944 GIKKLEGIFNREGKAVDDLLNIAKTLRAVPVVDLDTPTLCLVGAPNVGKSSLVRILSTGK 765
G++KLE +F EGKAVDDLLNIAKTLRA+PVVDL+TPTLCLVGAPNVGKSSLVR+LSTGK
Sbjct: 122 GLEKLEEVFKCEGKAVDDLLNIAKTLRAMPVVDLETPTLCLVGAPNVGKSSLVRVLSTGK 181
Query: 764 PEVCNYPFTTRGILMGHISVNYQRFQVTDTPGLLKRFDDARNNLEKLTLAVLSHLPTAVL 585
PEVCNYPFTTRGILMGHI++N+Q FQVTDTPGLLKR D+ RNNLEKLTLAVLSHLPTA+L
Sbjct: 182 PEVCNYPFTTRGILMGHIALNFQHFQVTDTPGLLKRCDEDRNNLEKLTLAVLSHLPTAIL 241
Query: 584 YVHDLSGECGTSPSDQYVTYKEVHERFSNHLWIDVVSKCDLLQAAPVHFITEDGEEDDLE 405
YVHDL+GECGTSPSDQ+V YKE+ +RFSNHLW+DVVSKCD+LQ APV FI ED + D+ E
Sbjct: 242 YVHDLTGECGTSPSDQFVIYKEIKQRFSNHLWLDVVSKCDILQEAPVIFIMEDSDTDNPE 301
Query: 404 MARYRKAGPDGAIPVSVKSEVGLDELKSKVHAMLLSQLAKLESEK 270
+ RYRK GP+GAI VSVK GLDELK +VH +L++Q+ ++ S K
Sbjct: 302 LERYRKKGPEGAILVSVKDGKGLDELKVQVHELLVTQMDRIRSSK 346
>ref|XP_002265256.2| PREDICTED: nucleolar GTP-binding protein 1-like [Vitis vinifera]
Length = 445
Score = 509 bits (1310), Expect = e-142
Identities = 253/349 (72%), Positives = 293/349 (83%)
Frame = -1
Query: 1304 VKPPLDILYSALRKAKKVPASKGISNIAKRERNRGAKQLDALMKELAIPLREYMDNFPNK 1125
V P +DILYSALRKAK+V +KGI+NIAKRERNR AKQLD LMKELA+PLR Y +NFP+K
Sbjct: 91 VMPSVDILYSALRKAKRVSPTKGIANIAKRERNRAAKQLDFLMKELAVPLRGYAENFPDK 150
Query: 1124 KHLHPYERSLIELTLGDGNYXXXXXXXXXXXXXXXXXXXEQASLCAKCLTKRDAEERLNE 945
K LHPYE+SLI+LTLGDGNY E ASLCAK LTKR+AEERL E
Sbjct: 151 KQLHPYEQSLIQLTLGDGNYEQVLRRVDSLRKKVVSVGKEHASLCAKSLTKREAEERLGE 210
Query: 944 GIKKLEGIFNREGKAVDDLLNIAKTLRAVPVVDLDTPTLCLVGAPNVGKSSLVRILSTGK 765
G+KKLE IFN EGKAVDDLLNIAKTLRA+PVVDL+TPTLCLVGAPNVGKSSLVR+LSTGK
Sbjct: 211 GMKKLEDIFNHEGKAVDDLLNIAKTLRAMPVVDLETPTLCLVGAPNVGKSSLVRVLSTGK 270
Query: 764 PEVCNYPFTTRGILMGHISVNYQRFQVTDTPGLLKRFDDARNNLEKLTLAVLSHLPTAVL 585
PEVCNYPFTTRGILMGHI+ NY+ FQVTDTPGLL R DD RNNLEKLTLAVLSHLPTA+L
Sbjct: 271 PEVCNYPFTTRGILMGHIAFNYRHFQVTDTPGLLNRHDDERNNLEKLTLAVLSHLPTAIL 330
Query: 584 YVHDLSGECGTSPSDQYVTYKEVHERFSNHLWIDVVSKCDLLQAAPVHFITEDGEEDDLE 405
YVHDLSGECGTSPSDQ+ YKE+ ERFS+HLWIDVVSKCDLLQ +P+ F TED D+ E
Sbjct: 331 YVHDLSGECGTSPSDQFFIYKEIRERFSDHLWIDVVSKCDLLQESPIIFNTEDVSADNPE 390
Query: 404 MARYRKAGPDGAIPVSVKSEVGLDELKSKVHAMLLSQLAKLESEKAIQE 258
+ARY+K GP+GAI VSVK+E L++LK +VH +L+SQ+++++S ++ +E
Sbjct: 391 LARYQKMGPEGAIHVSVKNEAALNQLKGRVHELLVSQMSRIKSSESNEE 439
>emb|CBI39064.3| unnamed protein product [Vitis vinifera]
Length = 456
Score = 509 bits (1310), Expect = e-142
Identities = 253/349 (72%), Positives = 293/349 (83%)
Frame = -1
Query: 1304 VKPPLDILYSALRKAKKVPASKGISNIAKRERNRGAKQLDALMKELAIPLREYMDNFPNK 1125
V P +DILYSALRKAK+V +KGI+NIAKRERNR AKQLD LMKELA+PLR Y +NFP+K
Sbjct: 91 VMPSVDILYSALRKAKRVSPTKGIANIAKRERNRAAKQLDFLMKELAVPLRGYAENFPDK 150
Query: 1124 KHLHPYERSLIELTLGDGNYXXXXXXXXXXXXXXXXXXXEQASLCAKCLTKRDAEERLNE 945
K LHPYE+SLI+LTLGDGNY E ASLCAK LTKR+AEERL E
Sbjct: 151 KQLHPYEQSLIQLTLGDGNYEQVLRRVDSLRKKVVSVGKEHASLCAKSLTKREAEERLGE 210
Query: 944 GIKKLEGIFNREGKAVDDLLNIAKTLRAVPVVDLDTPTLCLVGAPNVGKSSLVRILSTGK 765
G+KKLE IFN EGKAVDDLLNIAKTLRA+PVVDL+TPTLCLVGAPNVGKSSLVR+LSTGK
Sbjct: 211 GMKKLEDIFNHEGKAVDDLLNIAKTLRAMPVVDLETPTLCLVGAPNVGKSSLVRVLSTGK 270
Query: 764 PEVCNYPFTTRGILMGHISVNYQRFQVTDTPGLLKRFDDARNNLEKLTLAVLSHLPTAVL 585
PEVCNYPFTTRGILMGHI+ NY+ FQVTDTPGLL R DD RNNLEKLTLAVLSHLPTA+L
Sbjct: 271 PEVCNYPFTTRGILMGHIAFNYRHFQVTDTPGLLNRHDDERNNLEKLTLAVLSHLPTAIL 330
Query: 584 YVHDLSGECGTSPSDQYVTYKEVHERFSNHLWIDVVSKCDLLQAAPVHFITEDGEEDDLE 405
YVHDLSGECGTSPSDQ+ YKE+ ERFS+HLWIDVVSKCDLLQ +P+ F TED D+ E
Sbjct: 331 YVHDLSGECGTSPSDQFFIYKEIRERFSDHLWIDVVSKCDLLQESPIIFNTEDVSADNPE 390
Query: 404 MARYRKAGPDGAIPVSVKSEVGLDELKSKVHAMLLSQLAKLESEKAIQE 258
+ARY+K GP+GAI VSVK+E L++LK +VH +L+SQ+++++S ++ +E
Sbjct: 391 LARYQKMGPEGAIHVSVKNEAALNQLKGRVHELLVSQMSRIKSSESNEE 439
>ref|XP_002526509.1| nucleolar GTP-binding protein, putative [Ricinus communis]
gi|223534184|gb|EEF35900.1| nucleolar GTP-binding
protein, putative [Ricinus communis]
Length = 443
Score = 488 bits (1256), Expect = e-135
Identities = 244/343 (71%), Positives = 285/343 (83%)
Frame = -1
Query: 1304 VKPPLDILYSALRKAKKVPASKGISNIAKRERNRGAKQLDALMKELAIPLREYMDNFPNK 1125
V P +DILYSALRKAK+V +KGI+NIAKRERNRGAKQLDALMKELA+PLREY++NFP +
Sbjct: 93 VMPSVDILYSALRKAKRVSPTKGIANIAKRERNRGAKQLDALMKELALPLREYLENFPKR 152
Query: 1124 KHLHPYERSLIELTLGDGNYXXXXXXXXXXXXXXXXXXXEQASLCAKCLTKRDAEERLNE 945
K+LHPYE+SLIELTLGDGNY E AS+CAK LTKR+AEE+LNE
Sbjct: 153 KYLHPYEQSLIELTLGDGNYEEVLRKVDALRKKVVSIGKEHASVCAKSLTKREAEEQLNE 212
Query: 944 GIKKLEGIFNREGKAVDDLLNIAKTLRAVPVVDLDTPTLCLVGAPNVGKSSLVRILSTGK 765
G +KLE IF EGKAVDDLLNIAKTLRA+PVV+L+TPTLCLVGAPNVGKSSLVRILSTGK
Sbjct: 213 GREKLEEIFKCEGKAVDDLLNIAKTLRAMPVVNLETPTLCLVGAPNVGKSSLVRILSTGK 272
Query: 764 PEVCNYPFTTRGILMGHISVNYQRFQVTDTPGLLKRFDDARNNLEKLTLAVLSHLPTAVL 585
PEVCNYPFTTRGILMGHI+ ++Q FQVTDTPGLLKR D+ RNNLEKLTLAVL+HLPTA+L
Sbjct: 273 PEVCNYPFTTRGILMGHIAFDFQHFQVTDTPGLLKRCDEDRNNLEKLTLAVLTHLPTAIL 332
Query: 584 YVHDLSGECGTSPSDQYVTYKEVHERFSNHLWIDVVSKCDLLQAAPVHFITEDGEEDDLE 405
YVHDL+GECGTS SDQ+V YKE+ ERFS+HLW+DVVSKCDLLQ + + F +D D E
Sbjct: 333 YVHDLTGECGTSASDQFVIYKEIKERFSDHLWLDVVSKCDLLQESSMIFNAKDNNNDHFE 392
Query: 404 MARYRKAGPDGAIPVSVKSEVGLDELKSKVHAMLLSQLAKLES 276
M RY K GP+GAI VS+KS GL+ELK +V +L+ Q+ +++S
Sbjct: 393 MVRYHKVGPNGAIRVSIKSGEGLNELKGRVQNLLVGQMERIKS 435
>ref|XP_004164807.1| PREDICTED: nucleolar GTP-binding protein 1-like [Cucumis sativus]
Length = 444
Score = 478 bits (1231), Expect = e-132
Identities = 236/349 (67%), Positives = 286/349 (81%)
Frame = -1
Query: 1304 VKPPLDILYSALRKAKKVPASKGISNIAKRERNRGAKQLDALMKELAIPLREYMDNFPNK 1125
V P +DIL+SAL+ AK+V +KGI+NIAKRERNRGAKQLD LMKELA+ LR Y++ FP K
Sbjct: 95 VMPSIDILHSALKTAKRVSPTKGIANIAKRERNRGAKQLDTLMKELAVRLRTYLEEFPKK 154
Query: 1124 KHLHPYERSLIELTLGDGNYXXXXXXXXXXXXXXXXXXXEQASLCAKCLTKRDAEERLNE 945
++LHPYE SLIELTLGDG Y E ASLCAK +KRDAEE L+
Sbjct: 155 EYLHPYECSLIELTLGDGKYEQVLRKVDTLRKKVVSTGKEYASLCAKSASKRDAEESLSV 214
Query: 944 GIKKLEGIFNREGKAVDDLLNIAKTLRAVPVVDLDTPTLCLVGAPNVGKSSLVRILSTGK 765
G+KK+E + + KAVDDLL+IAKTLRA+PVVDLD PTLCLVGAPNVGKSSLVRILSTGK
Sbjct: 215 GMKKVEEAYIHQAKAVDDLLHIAKTLRAMPVVDLDKPTLCLVGAPNVGKSSLVRILSTGK 274
Query: 764 PEVCNYPFTTRGILMGHISVNYQRFQVTDTPGLLKRFDDARNNLEKLTLAVLSHLPTAVL 585
PE+CNYPFTTRGILMGHI +NYQ FQVTDTPGLL+R DD RNNLEKLTLAVLSHLPTAVL
Sbjct: 275 PEICNYPFTTRGILMGHIVLNYQHFQVTDTPGLLRRSDDDRNNLEKLTLAVLSHLPTAVL 334
Query: 584 YVHDLSGECGTSPSDQYVTYKEVHERFSNHLWIDVVSKCDLLQAAPVHFITEDGEEDDLE 405
+VHDLSGECGTSPSDQ+ YKE+ ER+ +HLW++VVSKCDLL+ +PV F TE+ + DD+E
Sbjct: 335 FVHDLSGECGTSPSDQFAIYKEMKERYGSHLWLNVVSKCDLLKESPVTFSTENCDHDDIE 394
Query: 404 MARYRKAGPDGAIPVSVKSEVGLDELKSKVHAMLLSQLAKLESEKAIQE 258
+ +YR+ GPDGA+ VSVK+++GL+ELK +VH ML+SQ+ +++ +KA +E
Sbjct: 395 LQKYRRFGPDGALLVSVKNDIGLNELKERVHEMLVSQMTRIKEQKATEE 443