BLASTX nr result

ID: Coptis23_contig00013256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013256
         (1165 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634318.1| PREDICTED: LOW QUALITY PROTEIN: putative G3B...   203   6e-50
emb|CBI15315.3| unnamed protein product [Vitis vinifera]              203   6e-50
emb|CBI21211.3| unnamed protein product [Vitis vinifera]              189   9e-46
ref|XP_002277093.1| PREDICTED: putative G3BP-like protein-like [...   189   9e-46
ref|XP_002324119.1| predicted protein [Populus trichocarpa] gi|2...   188   2e-45

>ref|XP_003634318.1| PREDICTED: LOW QUALITY PROTEIN: putative G3BP-like protein-like
            [Vitis vinifera]
          Length = 469

 Score =  203 bits (517), Expect = 6e-50
 Identities = 130/287 (45%), Positives = 164/287 (57%), Gaps = 3/287 (1%)
 Frame = -1

Query: 1165 ESLDNNEEVHNPSDYEEGSVDDVEVIAEPAAHSGQNEALPITETASSLPHEDAIKKSYAS 986
            E L+N  EV +PSD EEGSV + E + EP + S +NE   + ++A +   EDA KKSYAS
Sbjct: 187  EDLNNVAEVCDPSDNEEGSVIEEEAVVEPPSISSENEISTVVDSAPAA-QEDAPKKSYAS 245

Query: 985  ILKVVKGTRTPIPVYVPANSARVASGKTDQQSXXXXXXXXXXXXXXXXXXXXXEITDAHE 806
            I+KV+KG+ T  PV+   ++ R A    DQQ                      E ++ +E
Sbjct: 246  IVKVMKGSATSTPVFA-TSTVRAAPANIDQQLAGSAKSAPAPEAWTPTSDSAPESSNINE 304

Query: 805  EVEGHSIYIRSLGMNVTIEEVEEEFKKFGIVKPGGIQVRINKQQGYCFGFVEFEELSSMH 626
            E  G SIY+R L ++ T+ ++EEEFKKFG +K  GIQVR NKQ G+CFGFVEFE LSSM 
Sbjct: 305  E--GFSIYVRHLPLSATVPQLEEEFKKFGPIKQDGIQVRSNKQ-GFCFGFVEFESLSSMQ 361

Query: 625  SALEASPITIGGRQAFIEQKRTTSR-GVVGRG--PPNREGIXXXXXXXXXXXXXXXXXXX 455
            SALEASPITIG RQA +E+KRTT+R G  GRG  PP R G                    
Sbjct: 362  SALEASPITIGDRQAVVEEKRTTTRVGASGRGRYPPGRGGFRNDNFRGRGNFGGGRGYGR 421

Query: 454  XXXXXXXXXXXXXXGALGRGVEGYQRVNQNVSGRTGRQGGVNQTNSS 314
                          G  GR  E YQRVNQN SG+TGRQGG+   ++S
Sbjct: 422  NESRNQGEYSGRARGPTGRNGEAYQRVNQNGSGKTGRQGGMAWNSAS 468


>emb|CBI15315.3| unnamed protein product [Vitis vinifera]
          Length = 500

 Score =  203 bits (517), Expect = 6e-50
 Identities = 130/287 (45%), Positives = 164/287 (57%), Gaps = 3/287 (1%)
 Frame = -1

Query: 1165 ESLDNNEEVHNPSDYEEGSVDDVEVIAEPAAHSGQNEALPITETASSLPHEDAIKKSYAS 986
            E L+N  EV +PSD EEGSV + E + EP + S +NE   + ++A +   EDA KKSYAS
Sbjct: 218  EDLNNVAEVCDPSDNEEGSVIEEEAVVEPPSISSENEISTVVDSAPAA-QEDAPKKSYAS 276

Query: 985  ILKVVKGTRTPIPVYVPANSARVASGKTDQQSXXXXXXXXXXXXXXXXXXXXXEITDAHE 806
            I+KV+KG+ T  PV+   ++ R A    DQQ                      E ++ +E
Sbjct: 277  IVKVMKGSATSTPVFA-TSTVRAAPANIDQQLAGSAKSAPAPEAWTPTSDSAPESSNINE 335

Query: 805  EVEGHSIYIRSLGMNVTIEEVEEEFKKFGIVKPGGIQVRINKQQGYCFGFVEFEELSSMH 626
            E  G SIY+R L ++ T+ ++EEEFKKFG +K  GIQVR NKQ G+CFGFVEFE LSSM 
Sbjct: 336  E--GFSIYVRHLPLSATVPQLEEEFKKFGPIKQDGIQVRSNKQ-GFCFGFVEFESLSSMQ 392

Query: 625  SALEASPITIGGRQAFIEQKRTTSR-GVVGRG--PPNREGIXXXXXXXXXXXXXXXXXXX 455
            SALEASPITIG RQA +E+KRTT+R G  GRG  PP R G                    
Sbjct: 393  SALEASPITIGDRQAVVEEKRTTTRVGASGRGRYPPGRGGFRNDNFRGRGNFGGGRGYGR 452

Query: 454  XXXXXXXXXXXXXXGALGRGVEGYQRVNQNVSGRTGRQGGVNQTNSS 314
                          G  GR  E YQRVNQN SG+TGRQGG+   ++S
Sbjct: 453  NESRNQGEYSGRARGPTGRNGEAYQRVNQNGSGKTGRQGGMAWNSAS 499


>emb|CBI21211.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  189 bits (481), Expect = 9e-46
 Identities = 103/205 (50%), Positives = 133/205 (64%)
 Frame = -1

Query: 1147 EEVHNPSDYEEGSVDDVEVIAEPAAHSGQNEALPITETASSLPHEDAIKKSYASILKVVK 968
            E+V++P + EE  V++ E   E  +H  +N+   I E++SS   EDA KKSYASI+KV+K
Sbjct: 184  EKVYDPLENEEQLVNEEEDFTETQSHPIENDDSTIAESSSSSAQEDAPKKSYASIVKVMK 243

Query: 967  GTRTPIPVYVPANSARVASGKTDQQSXXXXXXXXXXXXXXXXXXXXXEITDAHEEVEGHS 788
            G+     VYVP  + +V   KT+ QS                     E +DA EEVEGHS
Sbjct: 244  GSSGSTKVYVPTKTTKVTPAKTENQSPGLAAPAPVPESSVTSSINAPESSDAPEEVEGHS 303

Query: 787  IYIRSLGMNVTIEEVEEEFKKFGIVKPGGIQVRINKQQGYCFGFVEFEELSSMHSALEAS 608
            IYIR+L +NVT+ ++E EF+KFG +K GG+QVR NKQQ YCFGFVEF  LSSMHSA++AS
Sbjct: 304  IYIRNLPLNVTVSQLEAEFQKFGPIKQGGVQVRSNKQQAYCFGFVEFLSLSSMHSAIQAS 363

Query: 607  PITIGGRQAFIEQKRTTSRGVVGRG 533
            PI IG  QA +E KRTT+R   GRG
Sbjct: 364  PIIIGDHQAVVEIKRTTTRVGSGRG 388


>ref|XP_002277093.1| PREDICTED: putative G3BP-like protein-like [Vitis vinifera]
          Length = 529

 Score =  189 bits (481), Expect = 9e-46
 Identities = 103/205 (50%), Positives = 133/205 (64%)
 Frame = -1

Query: 1147 EEVHNPSDYEEGSVDDVEVIAEPAAHSGQNEALPITETASSLPHEDAIKKSYASILKVVK 968
            E+V++P + EE  V++ E   E  +H  +N+   I E++SS   EDA KKSYASI+KV+K
Sbjct: 186  EKVYDPLENEEQLVNEEEDFTETQSHPIENDDSTIAESSSSSAQEDAPKKSYASIVKVMK 245

Query: 967  GTRTPIPVYVPANSARVASGKTDQQSXXXXXXXXXXXXXXXXXXXXXEITDAHEEVEGHS 788
            G+     VYVP  + +V   KT+ QS                     E +DA EEVEGHS
Sbjct: 246  GSSGSTKVYVPTKTTKVTPAKTENQSPGLAAPAPVPESSVTSSINAPESSDAPEEVEGHS 305

Query: 787  IYIRSLGMNVTIEEVEEEFKKFGIVKPGGIQVRINKQQGYCFGFVEFEELSSMHSALEAS 608
            IYIR+L +NVT+ ++E EF+KFG +K GG+QVR NKQQ YCFGFVEF  LSSMHSA++AS
Sbjct: 306  IYIRNLPLNVTVSQLEAEFQKFGPIKQGGVQVRSNKQQAYCFGFVEFLSLSSMHSAIQAS 365

Query: 607  PITIGGRQAFIEQKRTTSRGVVGRG 533
            PI IG  QA +E KRTT+R   GRG
Sbjct: 366  PIIIGDHQAVVEIKRTTTRVGSGRG 390


>ref|XP_002324119.1| predicted protein [Populus trichocarpa] gi|222867121|gb|EEF04252.1|
            predicted protein [Populus trichocarpa]
          Length = 458

 Score =  188 bits (478), Expect = 2e-45
 Identities = 100/205 (48%), Positives = 134/205 (65%)
 Frame = -1

Query: 1147 EEVHNPSDYEEGSVDDVEVIAEPAAHSGQNEALPITETASSLPHEDAIKKSYASILKVVK 968
            E+ +  SD+E+  V+D E+I E    S +N    + E+ SS+  EDA KKSYASI+KV K
Sbjct: 186  EKANESSDHEKQLVNDREIIVEDL--SDENNVPVVVESVSSMIQEDAPKKSYASIVKVAK 243

Query: 967  GTRTPIPVYVPANSARVASGKTDQQSXXXXXXXXXXXXXXXXXXXXXEITDAHEEVEGHS 788
            G+  PI VY+PAN+ ++   +T+ QS                     E + A EEVEGHS
Sbjct: 244  GSLLPIKVYLPANTTKMVPKRTENQSEKSVAPVLEPETSVPSSNDAPETSSAQEEVEGHS 303

Query: 787  IYIRSLGMNVTIEEVEEEFKKFGIVKPGGIQVRINKQQGYCFGFVEFEELSSMHSALEAS 608
            IYIR+L  N+T+ ++E EF+KFG +K GG+QVR N+QQGYCFGFVEF   +SM+SA+EAS
Sbjct: 304  IYIRNLPFNLTVSQLEAEFEKFGPIKEGGVQVRYNRQQGYCFGFVEFHSPNSMNSAIEAS 363

Query: 607  PITIGGRQAFIEQKRTTSRGVVGRG 533
            P+TIGGRQ  +E KRT +R   GRG
Sbjct: 364  PMTIGGRQIVVEMKRTNTRVGSGRG 388


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