BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013224
         (1573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148442.1| PREDICTED: geranylgeranyl pyrophosphate synt...   450   e-124
gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humul...   443   e-122
gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avel...   442   e-122
gb|ACO59905.1| geranylgeranyl pyrophosphate synthase [Elaeagnus ...   442   e-122
ref|XP_002273789.1| PREDICTED: geranylgeranyl pyrophosphate synt...   440   e-121

>ref|XP_004148442.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic-like
            [Cucumis sativus] gi|449514740|ref|XP_004164466.1|
            PREDICTED: geranylgeranyl pyrophosphate synthase,
            chloroplastic-like [Cucumis sativus]
          Length = 363

 Score =  450 bits (1158), Expect = e-124
 Identities = 241/363 (66%), Positives = 278/363 (76%)
 Frame = +2

Query: 284  QTCFQFNYASKSAPSGFSIGSLLKRRHSSHLYWERRSKRISISSYVPISAVLTKEETLKA 463
            Q+C  F+ AS+S       G  LKR   S +  +RR    SISS + I AVLTKEETL  
Sbjct: 11   QSCSIFSQASRST------GYPLKRGLKSFIIPKRRLPTSSISS-LSICAVLTKEETLTE 63

Query: 464  EEVQKKAHFAFNFDSYMHGKATSVNQALDKAILLKEPLKIHESMRYSLLAGGKRVRPILC 643
            EE +      FNF  YM  K  SVN ALD A+ L+EPL+IHE+MRYSL+AGGKRVRP+LC
Sbjct: 64   EEGKP----TFNFKEYMVQKGASVNHALDAAVFLREPLRIHEAMRYSLMAGGKRVRPVLC 119

Query: 644  IAACELVGGDEXXXXXXXXXXEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGESXXXX 823
            IAACELVGG+E          EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV+GE     
Sbjct: 120  IAACELVGGNESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 179

Query: 824  XXXXXXXXXFEHIANATVGVSPLKIVRVVSELAKAIGSEGLVAGQVVDIGSTGATDVKLD 1003
                     FEHIA +T+GVSP +IVR + ELAK+IG+EGLVAGQVVDI S GA D  L+
Sbjct: 180  AGDALLAFAFEHIAVSTIGVSPPRIVRAIGELAKSIGAEGLVAGQVVDINSEGAADAGLE 239

Query: 1004 QLEYIHIHKTAVLLESSVVMGAIVGGGSNEEVEKLRKFARCIGLLFQVVDDILDVTKSSE 1183
            QLEYIH+HKTA LLE++VV+GAI+GGGSNE+VEKLR FAR IGLLFQVVDDILDVTKSS 
Sbjct: 240  QLEYIHLHKTAALLEAAVVLGAILGGGSNEDVEKLRNFARYIGLLFQVVDDILDVTKSSN 299

Query: 1184 ELGKTAGKDLMSDKTTYPKLIGLEKSKAFADKLNKEAKEQLSDFDPVKAAPLVALANYIA 1363
            ELGKTAGKDL++DK TYPKL+G+EKS+ FA KLN++A+EQLS FDP KAAPL+ALANYIA
Sbjct: 300  ELGKTAGKDLVADKVTYPKLMGIEKSREFAQKLNRDAQEQLSGFDPDKAAPLIALANYIA 359

Query: 1364 YRQ 1372
            YRQ
Sbjct: 360  YRQ 362


>gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humulus lupulus]
          Length = 369

 Score =  443 bits (1140), Expect = e-122
 Identities = 229/363 (63%), Positives = 277/363 (76%)
 Frame = +2

Query: 284  QTCFQFNYASKSAPSGFSIGSLLKRRHSSHLYWERRSKRISISSYVPISAVLTKEETLKA 463
            QTC  FN A +S  S F++      +     +   + +R + SS+  ISAVLT++E +  
Sbjct: 10   QTCSMFNQAGRSRSSTFNLLHYHPLKKVPFSFQTPKQRRPT-SSFSSISAVLTEQEAVTE 68

Query: 464  EEVQKKAHFAFNFDSYMHGKATSVNQALDKAILLKEPLKIHESMRYSLLAGGKRVRPILC 643
            +E QK     FNF SYM  KA SVNQALD A+LL+EP  IHE+MRYSLLAGGKRVRP+LC
Sbjct: 69   DEEQKST---FNFKSYMVQKANSVNQALDAAVLLREPQMIHEAMRYSLLAGGKRVRPVLC 125

Query: 644  IAACELVGGDEXXXXXXXXXXEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGESXXXX 823
            ++ACELVGGDE          EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV+GE     
Sbjct: 126  LSACELVGGDESVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVL 185

Query: 824  XXXXXXXXXFEHIANATVGVSPLKIVRVVSELAKAIGSEGLVAGQVVDIGSTGATDVKLD 1003
                     FEH+A +TVGV   +I+R + ELAK+IGSEGLVAGQVVDI S G  +V L+
Sbjct: 186  AGDALLAYAFEHVAVSTVGVPAARIIRAIGELAKSIGSEGLVAGQVVDIDSEGLANVGLE 245

Query: 1004 QLEYIHIHKTAVLLESSVVMGAIVGGGSNEEVEKLRKFARCIGLLFQVVDDILDVTKSSE 1183
            QLE+IH+HKTA LLE+SVV+GAI+GGG++E+VE+LR FARCIGLLFQ VDDILDVTKSS+
Sbjct: 246  QLEFIHLHKTAALLEASVVLGAILGGGTDEQVEELRSFARCIGLLFQAVDDILDVTKSSQ 305

Query: 1184 ELGKTAGKDLMSDKTTYPKLIGLEKSKAFADKLNKEAKEQLSDFDPVKAAPLVALANYIA 1363
            ELGKTAGKDL++DK TYP+L+G+EKS+ FA+KLN+EA+E L  FDP KAAPL+ALANYIA
Sbjct: 306  ELGKTAGKDLVADKATYPRLMGIEKSREFAEKLNREAQEHLGGFDPQKAAPLIALANYIA 365

Query: 1364 YRQ 1372
            YRQ
Sbjct: 366  YRQ 368


>gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avellana]
          Length = 373

 Score =  442 bits (1138), Expect = e-122
 Identities = 234/367 (63%), Positives = 277/367 (75%)
 Frame = +2

Query: 272  SPCAQTCFQFNYASKSAPSGFSIGSLLKRRHSSHLYWERRSKRISISSYVPISAVLTKEE 451
            S   QTC  FN A +S         +L    +  + +    +R SISS V +SAVLTKE+
Sbjct: 7    STWVQTCSMFNQAGRSRSMSTPSFQILHPLKNIPISFIPPKRRRSISS-VSVSAVLTKED 65

Query: 452  TLKAEEVQKKAHFAFNFDSYMHGKATSVNQALDKAILLKEPLKIHESMRYSLLAGGKRVR 631
            TL+ EE  +     FNF +YM  KA SVNQALD A+ LK+P KIHE+MRYSLLAGGKRVR
Sbjct: 66   TLREEEESESEARTFNFKTYMLQKANSVNQALDAAVSLKDPRKIHEAMRYSLLAGGKRVR 125

Query: 632  PILCIAACELVGGDEXXXXXXXXXXEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGES 811
            P+LCIAACELVGG E          EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV+GE 
Sbjct: 126  PMLCIAACELVGGTESIAMPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGED 185

Query: 812  XXXXXXXXXXXXXFEHIANATVGVSPLKIVRVVSELAKAIGSEGLVAGQVVDIGSTGATD 991
                         FEHIA +T GV P +I+R + ELA++IG+EGLVAGQVVDI S G +D
Sbjct: 186  VAVLAGDALLAFSFEHIAVSTEGVPPARILRAIGELARSIGAEGLVAGQVVDICSEGLSD 245

Query: 992  VKLDQLEYIHIHKTAVLLESSVVMGAIVGGGSNEEVEKLRKFARCIGLLFQVVDDILDVT 1171
            V L+ LE+IH+HKTA LLE +VV+GAI+GGGSNEEVEKLR FAR IGLLFQVVDDILDVT
Sbjct: 246  VGLEHLEFIHLHKTAALLEGAVVLGAILGGGSNEEVEKLRNFARYIGLLFQVVDDILDVT 305

Query: 1172 KSSEELGKTAGKDLMSDKTTYPKLIGLEKSKAFADKLNKEAKEQLSDFDPVKAAPLVALA 1351
            KSS+ELGKTAGKDL++DK TYPKL+G+EKS+ FA+KLNK+A++QL+ FD  KAAPL+ALA
Sbjct: 306  KSSQELGKTAGKDLVADKVTYPKLMGVEKSREFAEKLNKDAQDQLAGFDAEKAAPLIALA 365

Query: 1352 NYIAYRQ 1372
            NYIA+RQ
Sbjct: 366  NYIAHRQ 372


>gb|ACO59905.1| geranylgeranyl pyrophosphate synthase [Elaeagnus umbellata]
          Length = 365

 Score =  442 bits (1138), Expect = e-122
 Identities = 235/354 (66%), Positives = 276/354 (77%)
 Frame = +2

Query: 311  SKSAPSGFSIGSLLKRRHSSHLYWERRSKRISISSYVPISAVLTKEETLKAEEVQKKAHF 490
            S+S  S F +   LK    S  +   +S+R   SS+  +SAVLTK+ET+K EE ++K   
Sbjct: 15   SRSRSSPFKLLHPLKSHGFSFQF--SKSQRPISSSFFTVSAVLTKQETVKEEEGEEKP-- 70

Query: 491  AFNFDSYMHGKATSVNQALDKAILLKEPLKIHESMRYSLLAGGKRVRPILCIAACELVGG 670
             FNF +YM  K  SVNQALD A+ LKEP KIHE+MRYSLLAGGKRVRP+LC+AACELVGG
Sbjct: 71   TFNFKAYMIEKGHSVNQALDSAVALKEPEKIHEAMRYSLLAGGKRVRPVLCLAACELVGG 130

Query: 671  DEXXXXXXXXXXEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGESXXXXXXXXXXXXX 850
             E          EMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV+GE              
Sbjct: 131  HESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEEVAVLAGDALLAFA 190

Query: 851  FEHIANATVGVSPLKIVRVVSELAKAIGSEGLVAGQVVDIGSTGATDVKLDQLEYIHIHK 1030
            FEHIA +TVGVS  +IVR + ELAK+IGSEGLVAGQVVDI S G +DV L+QLE+IH+HK
Sbjct: 191  FEHIAVSTVGVSTARIVRSIGELAKSIGSEGLVAGQVVDICSEGLSDVGLEQLEFIHVHK 250

Query: 1031 TAVLLESSVVMGAIVGGGSNEEVEKLRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKD 1210
            TA LLE+SVV+GAI+GGGS+ E+EKLR FAR IGLLFQVVDDILDVTKSS+ELGKTAGKD
Sbjct: 251  TAALLEASVVLGAILGGGSDIEIEKLRMFARYIGLLFQVVDDILDVTKSSQELGKTAGKD 310

Query: 1211 LMSDKTTYPKLIGLEKSKAFADKLNKEAKEQLSDFDPVKAAPLVALANYIAYRQ 1372
            L++DK TYPKL+G+EKS+ FADKLNK+A++ LS FDP KAAPL+ALANYIA+RQ
Sbjct: 311  LVADKVTYPKLMGIEKSREFADKLNKDAQDMLSGFDPEKAAPLIALANYIAHRQ 364


>ref|XP_002273789.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic
            [Vitis vinifera]
          Length = 368

 Score =  440 bits (1132), Expect = e-121
 Identities = 221/314 (70%), Positives = 259/314 (82%)
 Frame = +2

Query: 431  AVLTKEETLKAEEVQKKAHFAFNFDSYMHGKATSVNQALDKAILLKEPLKIHESMRYSLL 610
            AVLTKEE ++  +  ++   AFNF++Y+  KA SVN+ALD A+ ++EP+K+HESMRYSLL
Sbjct: 54   AVLTKEEMVRGGDTPEEEKPAFNFNAYILDKANSVNKALDDAVPIREPVKVHESMRYSLL 113

Query: 611  AGGKRVRPILCIAACELVGGDEXXXXXXXXXXEMIHTMSLIHDDLPCMDNDDLRRGKPTN 790
            AGGKRVRP+LCIAACELVGGDE          EMIHTMSL+HDDLPCMDNDDLRRGKPTN
Sbjct: 114  AGGKRVRPVLCIAACELVGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTN 173

Query: 791  HKVYGESXXXXXXXXXXXXXFEHIANATVGVSPLKIVRVVSELAKAIGSEGLVAGQVVDI 970
            HKV+GE+             FEH+A ATVGV P  IVR V ELAK+IGSEGLVAGQVVDI
Sbjct: 174  HKVFGENVAILAGDALLAFAFEHMATATVGVPPGWIVRAVGELAKSIGSEGLVAGQVVDI 233

Query: 971  GSTGATDVKLDQLEYIHIHKTAVLLESSVVMGAIVGGGSNEEVEKLRKFARCIGLLFQVV 1150
             S G  DV L+ LEYIH+HKTA LLE +VV+GAI+GGGSNEE+EKLRKFARCIGLLFQVV
Sbjct: 234  CSEGLKDVGLEHLEYIHVHKTAALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLLFQVV 293

Query: 1151 DDILDVTKSSEELGKTAGKDLMSDKTTYPKLIGLEKSKAFADKLNKEAKEQLSDFDPVKA 1330
            DDILDVTKSS+ELGKTAGKDL++DK TYPKL+G+EKS+  A++LNK+AK+QLS FDP KA
Sbjct: 294  DDILDVTKSSQELGKTAGKDLVADKLTYPKLLGIEKSRELAEQLNKDAKDQLSGFDPDKA 353

Query: 1331 APLVALANYIAYRQ 1372
            APL+AL+NYIAYRQ
Sbjct: 354  APLIALSNYIAYRQ 367