BLASTX nr result

ID: Coptis23_contig00013222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013222
         (1052 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283851.1| PREDICTED: UPF0082 protein At2g25830 [Vitis ...   318   1e-84
ref|XP_002880709.1| hypothetical protein ARALYDRAFT_320374 [Arab...   310   3e-82
ref|NP_565610.1| YebC-related protein [Arabidopsis thaliana] gi|...   308   2e-81
ref|XP_002516504.1| conserved hypothetical protein [Ricinus comm...   307   2e-81
gb|AAL07079.1| unknown protein [Arabidopsis thaliana] gi|2128120...   301   2e-79

>ref|XP_002283851.1| PREDICTED: UPF0082 protein At2g25830 [Vitis vinifera]
           gi|296081846|emb|CBI20851.3| unnamed protein product
           [Vitis vinifera]
          Length = 319

 Score =  318 bits (815), Expect = 1e-84
 Identities = 171/252 (67%), Positives = 185/252 (73%)
 Frame = +3

Query: 6   SPLCMGRRSSKIXXXXXXXXXXXXXXYCKIGKEIVSAVKRGGPNTLSNTALATVIERAKE 185
           SP+CMGRRSSKI              Y KIGKE+VSAVKR GPN  SNT LA V+E+AKE
Sbjct: 68  SPVCMGRRSSKIAGRKGAQDAKKAKLYSKIGKEVVSAVKRDGPNPKSNTILAAVLEKAKE 127

Query: 186 LDVPKEIVDRNIKRASEKGQEAYIEKFYEVYGFGGAGMIVEVLTDKVNRSVAAVREVVKD 365
           LDVPKEIV+RNIKRASEKGQEAYIEKFYEVYGFGG  MI+EVLTDK+NRSVAAVREV+KD
Sbjct: 128 LDVPKEIVERNIKRASEKGQEAYIEKFYEVYGFGGVSMIIEVLTDKINRSVAAVREVMKD 187

Query: 366 CGGKMADPGSIMXXXXXXXXXXXXXXXXXXXQLLGIALDAGAEDVIXXXXXXXXXXXXXX 545
           CGGKMADPGS+M                   QLL IALD GAEDVI              
Sbjct: 188 CGGKMADPGSVMFKFRRARVVNVKASEADKDQLLTIALDTGAEDVIEPPVYEDDAEEDRS 247

Query: 546 XXXXKIVSSAENYAAILTKLREEEIAFEPDNGSELLPVTTIEVDDEAMDLNKELMSKLLE 725
               KIV+SAENY+AIL KLREE I FE DNG E+LP+TTIEVDDEAMDLNKELMSKLLE
Sbjct: 248 ESYYKIVTSAENYSAILEKLREEGINFETDNGFEMLPITTIEVDDEAMDLNKELMSKLLE 307

Query: 726 LNDVDAVYTDQK 761
           L+DVDAVY DQK
Sbjct: 308 LDDVDAVYMDQK 319


>ref|XP_002880709.1| hypothetical protein ARALYDRAFT_320374 [Arabidopsis lyrata subsp.
           lyrata] gi|297326548|gb|EFH56968.1| hypothetical protein
           ARALYDRAFT_320374 [Arabidopsis lyrata subsp. lyrata]
          Length = 327

 Score =  310 bits (795), Expect = 3e-82
 Identities = 160/252 (63%), Positives = 187/252 (74%)
 Frame = +3

Query: 6   SPLCMGRRSSKIXXXXXXXXXXXXXXYCKIGKEIVSAVKRGGPNTLSNTALATVIERAKE 185
           +PLCMGRRSSKI              YC+IGKE+VSAVK+GGPN +SNT LAT++++AKE
Sbjct: 76  TPLCMGRRSSKIAGRKGAQDSKKAKLYCRIGKEVVSAVKKGGPNPVSNTTLATILDKAKE 135

Query: 186 LDVPKEIVDRNIKRASEKGQEAYIEKFYEVYGFGGAGMIVEVLTDKVNRSVAAVREVVKD 365
           LDVPK+IV+RNIKRASEKGQEA+IEK YEVYG+GG  M+VEVLTDK+NRSVAA+R VVKD
Sbjct: 136 LDVPKDIVERNIKRASEKGQEAFIEKIYEVYGYGGVSMVVEVLTDKINRSVAAIRSVVKD 195

Query: 366 CGGKMADPGSIMXXXXXXXXXXXXXXXXXXXQLLGIALDAGAEDVIXXXXXXXXXXXXXX 545
            GGKMAD GS+M                   QLL IALDAGAEDVI              
Sbjct: 196 YGGKMADSGSVMFKFRRVRVVNIKVTEADKDQLLNIALDAGAEDVIEPPTYEDDTDEDRE 255

Query: 546 XXXXKIVSSAENYAAILTKLREEEIAFEPDNGSELLPVTTIEVDDEAMDLNKELMSKLLE 725
               KIV+S+ENY+ IL+KLR+E + FEPDNGSELLP+TT+EVDDEAM+LNKELM KLLE
Sbjct: 256 ERYYKIVTSSENYSTILSKLRDEGVNFEPDNGSELLPLTTVEVDDEAMELNKELMQKLLE 315

Query: 726 LNDVDAVYTDQK 761
           L+DVDAVY DQK
Sbjct: 316 LDDVDAVYIDQK 327


>ref|NP_565610.1| YebC-related protein [Arabidopsis thaliana]
           gi|22096384|sp|O82314.2|U082_ARATH RecName:
           Full=Probable transcriptional regulatory protein
           At2g25830 gi|20197365|gb|AAC42247.2| expressed protein
           [Arabidopsis thaliana] gi|330252663|gb|AEC07757.1|
           YebC-related protein [Arabidopsis thaliana]
          Length = 331

 Score =  308 bits (788), Expect = 2e-81
 Identities = 160/252 (63%), Positives = 186/252 (73%)
 Frame = +3

Query: 6   SPLCMGRRSSKIXXXXXXXXXXXXXXYCKIGKEIVSAVKRGGPNTLSNTALATVIERAKE 185
           +PLCMGRRSSKI              YC+IGKE+VSAVK+GGPN +SNT LAT++++AKE
Sbjct: 80  TPLCMGRRSSKIAGRKGAQDSKKAKLYCRIGKEVVSAVKKGGPNPVSNTTLATILDKAKE 139

Query: 186 LDVPKEIVDRNIKRASEKGQEAYIEKFYEVYGFGGAGMIVEVLTDKVNRSVAAVREVVKD 365
           LDVPK+IV+RNIKRASEKGQEA+IEK YEVYG+GG  M+VEVLTDK+NRSVAA+R VVKD
Sbjct: 140 LDVPKDIVERNIKRASEKGQEAFIEKIYEVYGYGGVSMVVEVLTDKINRSVAAIRSVVKD 199

Query: 366 CGGKMADPGSIMXXXXXXXXXXXXXXXXXXXQLLGIALDAGAEDVIXXXXXXXXXXXXXX 545
            GGKMAD GS+M                   QLL IALDAGAEDVI              
Sbjct: 200 YGGKMADSGSVMFKFKRVRVVNIKVTEADKDQLLIIALDAGAEDVIEPPTYEDDTDEDRE 259

Query: 546 XXXXKIVSSAENYAAILTKLREEEIAFEPDNGSELLPVTTIEVDDEAMDLNKELMSKLLE 725
               KIV+S ENY+ IL+KLR+E + FEPDNGSELLP+TT+EVDDEAM+LNKELM KLLE
Sbjct: 260 ERYYKIVTSNENYSTILSKLRDEGVNFEPDNGSELLPLTTVEVDDEAMELNKELMQKLLE 319

Query: 726 LNDVDAVYTDQK 761
           L+DVDAVY DQK
Sbjct: 320 LDDVDAVYIDQK 331


>ref|XP_002516504.1| conserved hypothetical protein [Ricinus communis]
           gi|223544324|gb|EEF45845.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 311

 Score =  307 bits (787), Expect = 2e-81
 Identities = 162/251 (64%), Positives = 185/251 (73%)
 Frame = +3

Query: 9   PLCMGRRSSKIXXXXXXXXXXXXXXYCKIGKEIVSAVKRGGPNTLSNTALATVIERAKEL 188
           P+CMGRRS KI              Y +IGKE+VSAVK+GGP+ +SNT LA ++E+AKEL
Sbjct: 61  PVCMGRRSCKIAGRKGAQDAKKAKLYSRIGKEVVSAVKKGGPSPISNTVLAALLEKAKEL 120

Query: 189 DVPKEIVDRNIKRASEKGQEAYIEKFYEVYGFGGAGMIVEVLTDKVNRSVAAVREVVKDC 368
           DVPK+I++RNIKRAS+KGQEAYIEK YEVYGFGG  ++VEVLTDK+NRSVAAVREVVKD 
Sbjct: 121 DVPKDILERNIKRASDKGQEAYIEKIYEVYGFGGVSIVVEVLTDKINRSVAAVREVVKDY 180

Query: 369 GGKMADPGSIMXXXXXXXXXXXXXXXXXXXQLLGIALDAGAEDVIXXXXXXXXXXXXXXX 548
           GGKMADPGS+M                   QLL IALDAGAEDVI               
Sbjct: 181 GGKMADPGSVMFKFKRVRVVNIKVTEADKDQLLAIALDAGAEDVIEPPIYEDDADEDKSE 240

Query: 549 XXXKIVSSAENYAAILTKLREEEIAFEPDNGSELLPVTTIEVDDEAMDLNKELMSKLLEL 728
              K+VSS+ENY  IL+KLREE I FE DNGSELLP+TTIEVDDEAMDLNKEL+SKLLEL
Sbjct: 241 SYYKVVSSSENYMEILSKLREEGIDFETDNGSELLPITTIEVDDEAMDLNKELISKLLEL 300

Query: 729 NDVDAVYTDQK 761
           +DVDAVYTDQK
Sbjct: 301 DDVDAVYTDQK 311


>gb|AAL07079.1| unknown protein [Arabidopsis thaliana] gi|21281203|gb|AAM45134.1|
           unknown protein [Arabidopsis thaliana]
          Length = 330

 Score =  301 bits (771), Expect = 2e-79
 Identities = 159/252 (63%), Positives = 185/252 (73%)
 Frame = +3

Query: 6   SPLCMGRRSSKIXXXXXXXXXXXXXXYCKIGKEIVSAVKRGGPNTLSNTALATVIERAKE 185
           +PLCMGR SSKI              YC+IGKE+VSAVK+GGPN +SNT LAT++++AKE
Sbjct: 80  TPLCMGR-SSKIAGRKGAQDSKKAKLYCRIGKEVVSAVKKGGPNPVSNTTLATILDKAKE 138

Query: 186 LDVPKEIVDRNIKRASEKGQEAYIEKFYEVYGFGGAGMIVEVLTDKVNRSVAAVREVVKD 365
           LDVPK+IV+RNIKRASEKGQEA+IEK YEVYG+GG  M+VEVLTDK+NRSVAA+R VVKD
Sbjct: 139 LDVPKDIVERNIKRASEKGQEAFIEKIYEVYGYGGVSMVVEVLTDKINRSVAAIRSVVKD 198

Query: 366 CGGKMADPGSIMXXXXXXXXXXXXXXXXXXXQLLGIALDAGAEDVIXXXXXXXXXXXXXX 545
            GGKMAD GS+M                   QLL IALDAGAEDVI              
Sbjct: 199 YGGKMADSGSVMFKFKRVRVVNIKVTEADKDQLLIIALDAGAEDVIEPPTYEDDTDEDRE 258

Query: 546 XXXXKIVSSAENYAAILTKLREEEIAFEPDNGSELLPVTTIEVDDEAMDLNKELMSKLLE 725
               KIV+S ENY+ IL+KLR+E + FEPDNGSELLP+TT+EVDDEAM+LNKELM KLLE
Sbjct: 259 ERYYKIVTSNENYSTILSKLRDEGVNFEPDNGSELLPLTTVEVDDEAMELNKELMQKLLE 318

Query: 726 LNDVDAVYTDQK 761
           L+DVDAVY DQK
Sbjct: 319 LDDVDAVYIDQK 330


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