BLASTX nr result

ID: Coptis23_contig00013219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013219
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002886260.1| integral membrane Yip1 family protein [Arabi...    82   6e-14
dbj|BAE98446.1| hypothetical protein [Arabidopsis thaliana]            82   6e-14
gb|AAM62630.1| unknown [Arabidopsis thaliana]                          82   6e-14
emb|CAB52470.1| putative protein [Arabidopsis thaliana] gi|72699...    82   6e-14
ref|NP_565442.1| Integral membrane Yip1-like protein [Arabidopsi...    82   6e-14

>ref|XP_002886260.1| integral membrane Yip1 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297332100|gb|EFH62519.1| integral membrane
           Yip1 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 278

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/42 (90%), Positives = 41/42 (97%)
 Frame = -3

Query: 129 GGHIIFFQSISLLGYCLFPLDVGAIICMLKGNVIVKMVVVSV 4
           GGHIIFFQS+SLLGYCLFPLDVGA+ICMLK NVI+KMVVVSV
Sbjct: 193 GGHIIFFQSLSLLGYCLFPLDVGAVICMLKDNVILKMVVVSV 234


>dbj|BAE98446.1| hypothetical protein [Arabidopsis thaliana]
          Length = 240

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/42 (90%), Positives = 41/42 (97%)
 Frame = -3

Query: 129 GGHIIFFQSISLLGYCLFPLDVGAIICMLKGNVIVKMVVVSV 4
           GGHIIFFQS+SLLGYCLFPLDVGA+ICMLK NVI+KMVVVSV
Sbjct: 196 GGHIIFFQSLSLLGYCLFPLDVGAVICMLKDNVILKMVVVSV 237


>gb|AAM62630.1| unknown [Arabidopsis thaliana]
          Length = 281

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/42 (90%), Positives = 41/42 (97%)
 Frame = -3

Query: 129 GGHIIFFQSISLLGYCLFPLDVGAIICMLKGNVIVKMVVVSV 4
           GGHIIFFQS+SLLGYCLFPLDVGA+ICMLK NVI+KMVVVSV
Sbjct: 196 GGHIIFFQSLSLLGYCLFPLDVGAVICMLKDNVILKMVVVSV 237


>emb|CAB52470.1| putative protein [Arabidopsis thaliana] gi|7269926|emb|CAB81019.1|
           putative protein [Arabidopsis thaliana]
          Length = 355

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/42 (90%), Positives = 41/42 (97%)
 Frame = -3

Query: 129 GGHIIFFQSISLLGYCLFPLDVGAIICMLKGNVIVKMVVVSV 4
           GGHIIFFQS+SLLGYCLFPLDVGA+ICMLK NVI+KMVVVSV
Sbjct: 270 GGHIIFFQSLSLLGYCLFPLDVGAVICMLKDNVILKMVVVSV 311


>ref|NP_565442.1| Integral membrane Yip1-like protein [Arabidopsis thaliana]
           gi|4185150|gb|AAD08953.1| expressed protein [Arabidopsis
           thaliana] gi|20197033|gb|AAM14883.1| expressed protein
           [Arabidopsis thaliana] gi|87116642|gb|ABD19685.1|
           At2g18840 [Arabidopsis thaliana]
           gi|330251718|gb|AEC06812.1| Integral membrane Yip1-like
           protein [Arabidopsis thaliana]
          Length = 281

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/42 (90%), Positives = 41/42 (97%)
 Frame = -3

Query: 129 GGHIIFFQSISLLGYCLFPLDVGAIICMLKGNVIVKMVVVSV 4
           GGHIIFFQS+SLLGYCLFPLDVGA+ICMLK NVI+KMVVVSV
Sbjct: 196 GGHIIFFQSLSLLGYCLFPLDVGAVICMLKDNVILKMVVVSV 237


Top