BLASTX nr result

ID: Coptis23_contig00013208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013208
         (915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266382.1| PREDICTED: vesicle transport protein USE1 [V...   286   6e-75
emb|CAN68312.1| hypothetical protein VITISV_028548 [Vitis vinifera]   285   1e-74
emb|CBI30101.3| unnamed protein product [Vitis vinifera]              269   6e-70
ref|XP_002267440.1| PREDICTED: vesicle transport protein USE1 [V...   268   2e-69
ref|XP_002278615.1| PREDICTED: vesicle transport protein USE1-li...   264   2e-68

>ref|XP_002266382.1| PREDICTED: vesicle transport protein USE1 [Vitis vinifera]
           gi|297735435|emb|CBI17875.3| unnamed protein product
           [Vitis vinifera]
          Length = 240

 Score =  286 bits (731), Expect = 6e-75
 Identities = 153/237 (64%), Positives = 180/237 (75%), Gaps = 3/237 (1%)
 Frame = -2

Query: 866 SKTEINLNRLLTAAPRQQNQTKLMHYVATLRELLEQLVAETTPEGLPRISKAKENDYXXX 687
           S+TE+NL RLL AAP+QQNQ KL+HYVATLRE LEQL  E T EGLPR+SK K N+Y   
Sbjct: 4   SRTEVNLRRLLAAAPQQQNQAKLIHYVATLREQLEQLTEERTLEGLPRVSKPKVNEYSEK 63

Query: 686 XXXXXXXXXXXXSMPRYS-ETVDVTGDEQIASTTEEKTYSP--PVLRRRLVSHPKVEDVN 516
                       S  + S E    T  ++  S TEE+ + P  P LRRR V   K ED +
Sbjct: 64  IEAIASKIGSPSSNVQVSQEPFSGTSGKEGTSKTEEEDHMPLSPGLRRRFVPASKFEDRS 123

Query: 515 HEITEADPSAPVKLDDAAHSHIEKHRKLQDDLTDEMVGLARQLKESSLMMNQSLQDTEKL 336
           H+  +AD S PVKLD AA +HIEKHRKLQ+DLTDEMVGLA+QLK+SSL+M+QS+Q+TEK+
Sbjct: 124 HDTIKADASGPVKLDAAAQAHIEKHRKLQEDLTDEMVGLAKQLKQSSLLMSQSIQNTEKI 183

Query: 335 LDSTEKAVEHSLASTGHANTRAMEIYSRSFKTTCFTWLLIFIMTCIFIMVVLLIRVT 165
           LDSTEKAVEHSLASTGH NTRAM+IYS SFKTTCFTW++IF+MTCIFIMVVLLIRVT
Sbjct: 184 LDSTEKAVEHSLASTGHVNTRAMDIYSNSFKTTCFTWIMIFVMTCIFIMVVLLIRVT 240


>emb|CAN68312.1| hypothetical protein VITISV_028548 [Vitis vinifera]
          Length = 240

 Score =  285 bits (728), Expect = 1e-74
 Identities = 152/237 (64%), Positives = 180/237 (75%), Gaps = 3/237 (1%)
 Frame = -2

Query: 866 SKTEINLNRLLTAAPRQQNQTKLMHYVATLRELLEQLVAETTPEGLPRISKAKENDYXXX 687
           S+TE+NL RLL AAP+QQNQ KL+HYVATLRE LEQL  E T EGLPR+SK K N+Y   
Sbjct: 4   SRTEVNLRRLLAAAPQQQNQAKLIHYVATLREQLEQLTEERTLEGLPRVSKPKVNEYSEK 63

Query: 686 XXXXXXXXXXXXSMPRYS-ETVDVTGDEQIASTTEEKTYSP--PVLRRRLVSHPKVEDVN 516
                       S  + S E    T  ++  S TEE+ + P  P LR+R V   K ED +
Sbjct: 64  IEAIASKITAPSSNVQVSQEPFSGTSGKEGTSKTEEEDHMPLSPGLRKRFVPASKFEDRS 123

Query: 515 HEITEADPSAPVKLDDAAHSHIEKHRKLQDDLTDEMVGLARQLKESSLMMNQSLQDTEKL 336
           H+  +AD S PVKLD AA +HIEKHRKLQ+DLTDEMVGLA+QLK+SSL+M+QS+Q+TEK+
Sbjct: 124 HDXIKADASGPVKLDAAAQAHIEKHRKLQEDLTDEMVGLAKQLKQSSLLMSQSIQNTEKI 183

Query: 335 LDSTEKAVEHSLASTGHANTRAMEIYSRSFKTTCFTWLLIFIMTCIFIMVVLLIRVT 165
           LDSTEKAVEHSLASTGH NTRAM+IYS SFKTTCFTW++IF+MTCIFIMVVLLIRVT
Sbjct: 184 LDSTEKAVEHSLASTGHVNTRAMDIYSNSFKTTCFTWIMIFVMTCIFIMVVLLIRVT 240


>emb|CBI30101.3| unnamed protein product [Vitis vinifera]
          Length = 299

 Score =  269 bits (688), Expect = 6e-70
 Identities = 147/248 (59%), Positives = 176/248 (70%), Gaps = 3/248 (1%)
 Frame = -2

Query: 899 SAATSKIFVMG-SKTEINLNRLLTAAPRQQNQTKLMHYVATLRELLEQLVAETTPEGLPR 723
           S+   +  VMG S+TE+NL RLL AAP+QQN+ KL+HYVATLRE LEQL  E T EGLPR
Sbjct: 52  SSTVVQDLVMGISRTEVNLRRLLAAAPQQQNRAKLIHYVATLREQLEQLTEERTLEGLPR 111

Query: 722 ISKAKENDYXXXXXXXXXXXXXXXSMPRYSETV--DVTGDEQIASTTEEKTYSPPVLRRR 549
           +SK K N+Y               S  + S+       G E  +   E+     P LRRR
Sbjct: 112 VSKQKVNEYAEEIEAIASKIIAPSSDVQVSQEPLSGTYGQESHSKDEEDSIPHSPGLRRR 171

Query: 548 LVSHPKVEDVNHEITEADPSAPVKLDDAAHSHIEKHRKLQDDLTDEMVGLARQLKESSLM 369
            V    VED  H+  +AD S PVKLD AA +H+EKHRKLQ+DLTDEMVGLA+QLK+ SL+
Sbjct: 172 FVPASNVEDRTHDTVKADASGPVKLDAAAQAHVEKHRKLQEDLTDEMVGLAKQLKQGSLL 231

Query: 368 MNQSLQDTEKLLDSTEKAVEHSLASTGHANTRAMEIYSRSFKTTCFTWLLIFIMTCIFIM 189
           M+QS++++EK+LDSTEKAVEHSLASTG  NTRAMEI S  FKTTCFTW+LIF+MTCIFIM
Sbjct: 232 MSQSIKNSEKILDSTEKAVEHSLASTGRVNTRAMEINSNGFKTTCFTWILIFVMTCIFIM 291

Query: 188 VVLLIRVT 165
           VVLLIRVT
Sbjct: 292 VVLLIRVT 299


>ref|XP_002267440.1| PREDICTED: vesicle transport protein USE1 [Vitis vinifera]
          Length = 239

 Score =  268 bits (684), Expect = 2e-69
 Identities = 143/236 (60%), Positives = 170/236 (72%), Gaps = 2/236 (0%)
 Frame = -2

Query: 866 SKTEINLNRLLTAAPRQQNQTKLMHYVATLRELLEQLVAETTPEGLPRISKAKENDYXXX 687
           S+TE+NL RLL AAP+QQN+ KL+HYVATLRE LEQL  E T EGLPR+SK K N+Y   
Sbjct: 4   SRTEVNLRRLLAAAPQQQNRAKLIHYVATLREQLEQLTEERTLEGLPRVSKQKVNEYAEE 63

Query: 686 XXXXXXXXXXXXSMPRYSETV--DVTGDEQIASTTEEKTYSPPVLRRRLVSHPKVEDVNH 513
                       S  + S+       G E  +   E+     P LRRR V    VED  H
Sbjct: 64  IEAIASKIIAPSSDVQVSQEPLSGTYGQESHSKDEEDSIPHSPGLRRRFVPASNVEDRTH 123

Query: 512 EITEADPSAPVKLDDAAHSHIEKHRKLQDDLTDEMVGLARQLKESSLMMNQSLQDTEKLL 333
           +  +AD S PVKLD AA +H+EKHRKLQ+DLTDEMVGLA+QLK+ SL+M+QS++++EK+L
Sbjct: 124 DTVKADASGPVKLDAAAQAHVEKHRKLQEDLTDEMVGLAKQLKQGSLLMSQSIKNSEKIL 183

Query: 332 DSTEKAVEHSLASTGHANTRAMEIYSRSFKTTCFTWLLIFIMTCIFIMVVLLIRVT 165
           DSTEKAVEHSLASTG  NTRAMEI S  FKTTCFTW+LIF+MTCIFIMVVLLIRVT
Sbjct: 184 DSTEKAVEHSLASTGRVNTRAMEINSNGFKTTCFTWILIFVMTCIFIMVVLLIRVT 239


>ref|XP_002278615.1| PREDICTED: vesicle transport protein USE1-like [Vitis vinifera]
          Length = 245

 Score =  264 bits (675), Expect = 2e-68
 Identities = 146/240 (60%), Positives = 171/240 (71%), Gaps = 3/240 (1%)
 Frame = -2

Query: 875 VMG-SKTEINLNRLLTAAPRQQNQTKLMHYVATLRELLEQLVAETTPEGLPRISKAKEND 699
           VMG S+TE+NL RLL AAP+QQNQ KL+HYVATLRE LEQL  E T EGLPR+SK K N+
Sbjct: 6   VMGISRTEVNLRRLLAAAPQQQNQAKLIHYVATLREQLEQLSEERTLEGLPRVSKQKVNE 65

Query: 698 YXXXXXXXXXXXXXXXSMPRYSETV--DVTGDEQIASTTEEKTYSPPVLRRRLVSHPKVE 525
           Y               S  + S+       G E  +   E+     P LRRR V    VE
Sbjct: 66  YAEEIEAMASKIIAPSSDVQVSQEPLSGTYGQEGHSKEGEDSIPHSPGLRRRFVPASNVE 125

Query: 524 DVNHEITEADPSAPVKLDDAAHSHIEKHRKLQDDLTDEMVGLARQLKESSLMMNQSLQDT 345
           D  H+  +AD   PVKLD AA +HIEKHRKLQ+DLTDEMVGLA+QLK+ SL+M+QS++++
Sbjct: 126 DRTHDTVKADTLGPVKLDVAAQAHIEKHRKLQEDLTDEMVGLAKQLKQGSLLMSQSIENS 185

Query: 344 EKLLDSTEKAVEHSLASTGHANTRAMEIYSRSFKTTCFTWLLIFIMTCIFIMVVLLIRVT 165
           EK+LDSTEKAVEHSLASTG  NTRAMEI S  FKTTCFTW+LIF+M CIFIMVVLLIRVT
Sbjct: 186 EKILDSTEKAVEHSLASTGRVNTRAMEINSNGFKTTCFTWILIFVMMCIFIMVVLLIRVT 245


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