BLASTX nr result

ID: Coptis23_contig00013164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013164
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU23606.1| unknown [Glycine max]                                  162   4e-38
ref|XP_002297863.1| predicted protein [Populus trichocarpa] gi|1...   157   2e-36
ref|XP_002263113.1| PREDICTED: uncharacterized protein LOC100247...   155   5e-36
ref|XP_002512640.1| conserved hypothetical protein [Ricinus comm...   154   1e-35
ref|XP_003551864.1| PREDICTED: uncharacterized protein LOC100779...   154   2e-35

>gb|ACU23606.1| unknown [Glycine max]
          Length = 197

 Score =  162 bits (411), Expect = 4e-38
 Identities = 94/196 (47%), Positives = 112/196 (57%), Gaps = 22/196 (11%)
 Frame = -1

Query: 624 MASITA-LERSLQNCSLNNRTRSN---------------GGGGVFR-SGIXXXXXXXXXX 496
           M +ITA LERSLQNCSLNN   ++               GG G+   S            
Sbjct: 1   MEAITASLERSLQNCSLNNTNNNHQQSRRPEEDDGSATDGGIGISSCSDDVPDPDNSHIS 60

Query: 495 XXXXXXXSHVSLPYHWEQCLDLKTGEIYYINWEDGTKEKEDPRRKCYYFS-----DDDEE 331
                  SH+SLPYHWEQCLDLKTGEIYYINW +G K KEDPR +   +S     + +EE
Sbjct: 61  DTTLELNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSRRADYSVSRDCESEEE 120

Query: 330 EVMNSYVSDGICXXXXXXXXXPLREEEGEHEQYNNNVLVVAGCKRCIMYFMLPKRVEECP 151
           E   S+                   +EG+ E+ NNNVLVVAGCK C+MYFM+PK+VE+CP
Sbjct: 121 EEEESWYDSEESSSESCPSSSKEHYDEGQVEKQNNNVLVVAGCKGCLMYFMVPKQVEDCP 180

Query: 150 KCNGLLLHFDRLENGS 103
           KC G LLHFDR ENGS
Sbjct: 181 KCTGQLLHFDRSENGS 196


>ref|XP_002297863.1| predicted protein [Populus trichocarpa] gi|118485800|gb|ABK94748.1|
           unknown [Populus trichocarpa]
           gi|222845121|gb|EEE82668.1| predicted protein [Populus
           trichocarpa]
          Length = 186

 Score =  157 bits (396), Expect = 2e-36
 Identities = 97/193 (50%), Positives = 115/193 (59%), Gaps = 14/193 (7%)
 Frame = -1

Query: 639 MEAPDMASITA-LERSLQNCSLNNRT--RSNG---GGGVFRSG----IXXXXXXXXXXXX 490
           M AP+MA+ITA LERSLQNCSLN+    +S+G   GG   RS     +            
Sbjct: 1   MTAPNMAAITASLERSLQNCSLNHHHHHQSSGILDGGREERSSSSDELDSQNHLQQNSDT 60

Query: 489 XXXXXSHVSLPYHWEQCLDLKTGEIYYINWEDGTKEKEDPRRKCYY----FSDDDEEEVM 322
                SH+SLPYHWEQCLDLKTGE+YYINW +G K +EDPR    Y    +S+DD     
Sbjct: 61  SLELKSHLSLPYHWEQCLDLKTGEVYYINWRNGMKAREDPRITQEYNGDFYSEDD----- 115

Query: 321 NSYVSDGICXXXXXXXXXPLREEEGEHEQYNNNVLVVAGCKRCIMYFMLPKRVEECPKCN 142
           +SY S+              RE      Q  ++VLVVAGCK C MYFM+PK+VE CPKCN
Sbjct: 116 SSYDSE---ESSSESSPSSSREHYHNRLQKEDHVLVVAGCKSCFMYFMVPKQVEVCPKCN 172

Query: 141 GLLLHFDRLENGS 103
           G LLHFDR ENGS
Sbjct: 173 GQLLHFDRSENGS 185


>ref|XP_002263113.1| PREDICTED: uncharacterized protein LOC100247256 [Vitis vinifera]
          Length = 194

 Score =  155 bits (393), Expect = 5e-36
 Identities = 92/196 (46%), Positives = 112/196 (57%), Gaps = 20/196 (10%)
 Frame = -1

Query: 639 MEAPDMASITA-LERSLQNCSLNNRTRSNGGGGVFRSGIXXXXXXXXXXXXXXXXXS--- 472
           M AP+MA+ITA LERSLQNCSLN+ + ++G G     GI                     
Sbjct: 1   MTAPNMATITASLERSLQNCSLNHSSSNSGEGSGVEDGIGISSTSDDASPENLSHSDTTL 60

Query: 471 ----HVSLPYHWEQCLDLKTGEIYYINWEDGTKEKEDPRRKCYY--------FSDDDEEE 328
                +SLPYHWEQCLDLKTGEIYYINW +G K KEDPR    Y        +S+DD   
Sbjct: 61  ELNSQMSLPYHWEQCLDLKTGEIYYINWINGKKAKEDPRTMADYSGGGGELDYSEDD--- 117

Query: 327 VMNSYVSDGICXXXXXXXXXPLREEEGEHEQY----NNNVLVVAGCKRCIMYFMLPKRVE 160
             +SY S+G             R++   H  Y     ++VLVVAGCK C+MYFM+PK+VE
Sbjct: 118 --SSYDSEG---SSSGSPPSSSRDQHHPHHHYRVVEKDHVLVVAGCKSCLMYFMVPKQVE 172

Query: 159 ECPKCNGLLLHFDRLE 112
           +CPKC G LLHFDR E
Sbjct: 173 DCPKCAGQLLHFDRSE 188


>ref|XP_002512640.1| conserved hypothetical protein [Ricinus communis]
           gi|223548601|gb|EEF50092.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 199

 Score =  154 bits (389), Expect = 1e-35
 Identities = 95/201 (47%), Positives = 114/201 (56%), Gaps = 22/201 (10%)
 Frame = -1

Query: 639 MEAPDMASITA-LERSLQNCSLNN-RTRSNGGGGVFRSGIXXXXXXXXXXXXXXXXXS-- 472
           M AP+MA+ITA LERSLQNCSLN+ ++R   GG   RS                   +  
Sbjct: 1   MTAPNMATITASLERSLQNCSLNHHQSRGVLGGAGERSSSSDDADFGAAQQQEDQNHNNN 60

Query: 471 ------------------HVSLPYHWEQCLDLKTGEIYYINWEDGTKEKEDPRRKCYYFS 346
                             H+SLPYHWEQCLDLKTGEIYYINW +G K KEDPR    Y S
Sbjct: 61  LNLPTSNSSTDTTLELNSHLSLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRVTQEY-S 119

Query: 345 DDDEEEVMNSYVSDGICXXXXXXXXXPLREEEGEHEQYNNNVLVVAGCKRCIMYFMLPKR 166
            D   E  +SY S+                  GE ++  ++VLVVAGCK C+MYFM+PK+
Sbjct: 120 GDYYSEDESSYDSEESSSESSPPSSREHYTSRGEQKE--DHVLVVAGCKSCLMYFMVPKQ 177

Query: 165 VEECPKCNGLLLHFDRLENGS 103
           VE+CPKCNG LLHFDR E+GS
Sbjct: 178 VEDCPKCNGQLLHFDRSEDGS 198


>ref|XP_003551864.1| PREDICTED: uncharacterized protein LOC100779868 [Glycine max]
          Length = 209

 Score =  154 bits (388), Expect = 2e-35
 Identities = 94/208 (45%), Positives = 112/208 (53%), Gaps = 34/208 (16%)
 Frame = -1

Query: 624 MASITA-LERSLQNCSLNNRTRSN---------------GGGGVFR-SGIXXXXXXXXXX 496
           M +ITA LERSLQNCSLNN   ++               GG G+   S            
Sbjct: 1   MEAITASLERSLQNCSLNNTNNNHQQSRRPEEDDGSATDGGIGISSCSDDVPDPDNSHIS 60

Query: 495 XXXXXXXSHVSLPYHWEQCLDLK------------TGEIYYINWEDGTKEKEDPRRKCYY 352
                  SH+SLPYHWEQCLDLK            TGEIYYINW +G K KEDPR +   
Sbjct: 61  DTTLELNSHISLPYHWEQCLDLKVFPSLTFSPPRPTGEIYYINWRNGMKAKEDPRSRRAD 120

Query: 351 FS-----DDDEEEVMNSYVSDGICXXXXXXXXXPLREEEGEHEQYNNNVLVVAGCKRCIM 187
           +S     + +EEE   S+                   +EG+ E+ NNNVLVVAGCK C+M
Sbjct: 121 YSVSRDCESEEEEEEESWYDSEESSSESCPSSSKEHYDEGQVEKQNNNVLVVAGCKGCLM 180

Query: 186 YFMLPKRVEECPKCNGLLLHFDRLENGS 103
           YFM+PK+VE+CPKC G LLHFDR ENGS
Sbjct: 181 YFMVPKQVEDCPKCTGQLLHFDRSENGS 208


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