BLASTX nr result

ID: Coptis23_contig00013150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013150
         (1632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242...   653   0.0  
emb|CAN82512.1| hypothetical protein VITISV_002153 [Vitis vinifera]   631   e-178
ref|XP_002523580.1| conserved hypothetical protein [Ricinus comm...   625   e-176
ref|XP_002330905.1| predicted protein [Populus trichocarpa] gi|2...   597   e-168
ref|XP_002325025.1| predicted protein [Populus trichocarpa] gi|2...   595   e-167

>ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242579 [Vitis vinifera]
          Length = 559

 Score =  653 bits (1684), Expect = 0.0
 Identities = 311/483 (64%), Positives = 370/483 (76%), Gaps = 7/483 (1%)
 Frame = +2

Query: 203  MGNCLPTAPSNS------HLPIETVFKLPSQVPPWPQXXXXXXXXXXXXX-LEVRQISTF 361
            MGNCL  + ++        L IET FKLP+ +P WP               LEV QIS+F
Sbjct: 1    MGNCLTVSSASDVSKKRKSLAIETSFKLPAPMPTWPPGEGFAGGTIDLGGGLEVCQISSF 60

Query: 362  QKVWATLEGGPDNLGATFFEPWPIPDGFFMLGCYAQPNNKSLFGWVLVGKDVQNDPSQGT 541
             KVWAT EGGPDNLGATFFEP P+P+ F MLGCY+QPN K LFGWVL GKD  N+P  G 
Sbjct: 61   TKVWATHEGGPDNLGATFFEPSPMPEEFCMLGCYSQPNKKPLFGWVLAGKDNTNNPLGGA 120

Query: 542  LKMPVDYRLVWSSESMKMKKEGNGYIWLPIPPDGYTAGGLILTNSPTKPPLEKVRCVHSD 721
            LK P+DY LVWSSES+K+K++GNGY+WLP PPDGY A G ++TN P KP L+K+RCV SD
Sbjct: 121  LKKPIDYTLVWSSESLKIKQDGNGYVWLPTPPDGYKAVGHVITNLPEKPSLDKIRCVRSD 180

Query: 722  LADLCEQDTWIWGTDRESNTSEVSVYGLRPTIRSTRALGVSIGTFTVQLTGVDTALSLSC 901
            L DLCE DTWIWG D+ +N +  +VY L+P+ R  +AL VS+GTF  Q  G  ++LSL+C
Sbjct: 181  LTDLCEADTWIWGLDKVANANGFNVYDLQPSDRGAQALAVSVGTFVAQNGGAASSLSLAC 240

Query: 902  LKSADSNFSCMPNLTQIKALVQAYSPSIYLHPDETYMASSVNWFFNNGALLYKKGDESNP 1081
            LK+  SN   MPNL Q+ ALVQAYSP +YLHPDE Y+ SSV+WFF NGALLY++G+ES P
Sbjct: 241  LKNISSNLYAMPNLAQVDALVQAYSPWVYLHPDEQYLPSSVSWFFQNGALLYQQGEESKP 300

Query: 1082 VSIDPNGSNLPQGGSNDGEYWLDLPVDKGARDEVMKGDLQSSTAYLHIKPMLGATFTDIS 1261
            V+IDP GSNLPQGGSNDG YWLDLPVD  A++ V KGDLQ S  Y+HIKPMLGATFTDI+
Sbjct: 301  VNIDPTGSNLPQGGSNDGAYWLDLPVDAKAKETVKKGDLQDSMTYMHIKPMLGATFTDIA 360

Query: 1262 TWIFYPFNGPGRAKLRLINIPLGKIGEHVGDWEHVTLRISNFTGELWRVYFSEHSGGTWV 1441
             WIFYPFNGP RAK+ LINI LGKIGEHVGDWEHVTLR+SNF G+L  V+FSEHS GTWV
Sbjct: 361  IWIFYPFNGPARAKVELINISLGKIGEHVGDWEHVTLRVSNFNGKLMNVFFSEHSSGTWV 420

Query: 1442 NASEVEYHSANNIVAYASLHGHAFYSKPGLVLQGNSNLDIGIRNDTAKSNIVIDTSMRYE 1621
            NASE+E+ + N +V+YASLHGHAFY KPGLVLQG+  +  GIRNDTAKS +V+DT  RY 
Sbjct: 421  NASELEFQNGNKVVSYASLHGHAFYPKPGLVLQGSGAM--GIRNDTAKSKMVMDTGTRYI 478

Query: 1622 VIS 1630
            V++
Sbjct: 479  VVA 481


>emb|CAN82512.1| hypothetical protein VITISV_002153 [Vitis vinifera]
          Length = 913

 Score =  631 bits (1627), Expect = e-178
 Identities = 294/428 (68%), Positives = 345/428 (80%)
 Frame = +2

Query: 335  LEVRQISTFQKVWATLEGGPDNLGATFFEPWPIPDGFFMLGCYAQPNNKSLFGWVLVGKD 514
            LEV QIS+F KVWAT EGGPDNLGATFFEP P+P+ F MLGCY+QPN K LFGWVL GKD
Sbjct: 21   LEVCQISSFTKVWATHEGGPDNLGATFFEPSPMPEEFCMLGCYSQPNKKPLFGWVLAGKD 80

Query: 515  VQNDPSQGTLKMPVDYRLVWSSESMKMKKEGNGYIWLPIPPDGYTAGGLILTNSPTKPPL 694
              N+P  G LK P+DY LVWSSES+K+K++GNGY+WLP PPDGY A G ++TN P KP L
Sbjct: 81   NTNNPLGGALKKPIDYTLVWSSESLKIKQDGNGYVWLPTPPDGYKAVGHVITNLPEKPSL 140

Query: 695  EKVRCVHSDLADLCEQDTWIWGTDRESNTSEVSVYGLRPTIRSTRALGVSIGTFTVQLTG 874
            +K+RCV SDL DLCE DTWIWG D+ +N +  +VY L+P+ R  +AL VS+GTF  Q  G
Sbjct: 141  DKIRCVRSDLTDLCEADTWIWGLDKVANANGFNVYDLQPSDRGAQALAVSVGTFVAQNGG 200

Query: 875  VDTALSLSCLKSADSNFSCMPNLTQIKALVQAYSPSIYLHPDETYMASSVNWFFNNGALL 1054
              ++LSL+CLK+  SN   MPNL Q+ ALVQAYSP +YLHPDE Y+ SSV+WFF NGALL
Sbjct: 201  AASSLSLACLKNISSNLYAMPNLAQVDALVQAYSPWVYLHPDEQYLPSSVSWFFQNGALL 260

Query: 1055 YKKGDESNPVSIDPNGSNLPQGGSNDGEYWLDLPVDKGARDEVMKGDLQSSTAYLHIKPM 1234
            Y++G+ES PV+IDP GSNLPQGGSNDG YWLDLPVD  A++ V KGDLQ S  Y+HIKPM
Sbjct: 261  YQQGEESKPVNIDPTGSNLPQGGSNDGAYWLDLPVDAKAKETVKKGDLQDSMTYMHIKPM 320

Query: 1235 LGATFTDISTWIFYPFNGPGRAKLRLINIPLGKIGEHVGDWEHVTLRISNFTGELWRVYF 1414
            LGATFTDI+ WIFYPFNGP RAK+ LINI LGKIGEHVGDWEHVTLR+SNF G+L  V+F
Sbjct: 321  LGATFTDIAIWIFYPFNGPARAKVELINISLGKIGEHVGDWEHVTLRVSNFNGKLMNVFF 380

Query: 1415 SEHSGGTWVNASEVEYHSANNIVAYASLHGHAFYSKPGLVLQGNSNLDIGIRNDTAKSNI 1594
            SEHS GTWVNASE+E+ + N +V+YASLHGHAFY KPGLVLQG+     GIRNDTAKS +
Sbjct: 381  SEHSSGTWVNASELEFQNGNKVVSYASLHGHAFYPKPGLVLQGSG--AXGIRNDTAKSKM 438

Query: 1595 VIDTSMRY 1618
            V+DT  RY
Sbjct: 439  VMDTGTRY 446


>ref|XP_002523580.1| conserved hypothetical protein [Ricinus communis]
            gi|223537142|gb|EEF38775.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 551

 Score =  625 bits (1612), Expect = e-176
 Identities = 289/479 (60%), Positives = 359/479 (74%), Gaps = 3/479 (0%)
 Frame = +2

Query: 203  MGNCLP---TAPSNSHLPIETVFKLPSQVPPWPQXXXXXXXXXXXXXLEVRQISTFQKVW 373
            MGNCL     +     LPIET FKLPS +P WP              L+V QIS+  KVW
Sbjct: 1    MGNCLSIKDVSKKRKTLPIETSFKLPSSLPKWPPGEGFGNGTIDLGGLQVCQISSLNKVW 60

Query: 374  ATLEGGPDNLGATFFEPWPIPDGFFMLGCYAQPNNKSLFGWVLVGKDVQNDPSQGTLKMP 553
            +T EGGPDN+GA+FFEP  IP GFFMLGCY Q N++ L+GWVL GKD     + G L+ P
Sbjct: 61   STQEGGPDNVGASFFEPSQIPQGFFMLGCYCQSNSRPLYGWVLAGKD----DAGGALEKP 116

Query: 554  VDYRLVWSSESMKMKKEGNGYIWLPIPPDGYTAGGLILTNSPTKPPLEKVRCVHSDLADL 733
            +DY LVWSSES+K+K++  GYIWLP  PDGY A GL++T+SP KP L+K+RCV SDL D 
Sbjct: 117  IDYTLVWSSESLKIKQDSIGYIWLPTAPDGYRAVGLVVTSSPEKPSLDKMRCVRSDLTDQ 176

Query: 734  CEQDTWIWGTDRESNTSEVSVYGLRPTIRSTRALGVSIGTFTVQLTGVDTALSLSCLKSA 913
            CE+D W+WG +++S+ +  +V+ LRP+ R T+A+GV +GTF  Q    +   SL CLK+ 
Sbjct: 177  CEKDIWVWGPEKQSDPNGFNVFSLRPSNRGTQAMGVCVGTFVAQNGNDNNPASLVCLKNV 236

Query: 914  DSNFSCMPNLTQIKALVQAYSPSIYLHPDETYMASSVNWFFNNGALLYKKGDESNPVSID 1093
             +N SCMPN  QI+A+ QAYSP IY HPDE Y+ SSV+W+FNNGALLYK+G+ESNPV ++
Sbjct: 237  SNNLSCMPNENQIQAIFQAYSPWIYFHPDEEYLPSSVSWYFNNGALLYKQGEESNPVKVE 296

Query: 1094 PNGSNLPQGGSNDGEYWLDLPVDKGARDEVMKGDLQSSTAYLHIKPMLGATFTDISTWIF 1273
             NGSNLPQGG+NDG YWLDLPVD+ A+D V KGDLQ +  YLHIKPM GATFTDI  W+F
Sbjct: 297  TNGSNLPQGGANDGVYWLDLPVDEKAKDRVKKGDLQETEVYLHIKPMFGATFTDIVIWVF 356

Query: 1274 YPFNGPGRAKLRLINIPLGKIGEHVGDWEHVTLRISNFTGELWRVYFSEHSGGTWVNASE 1453
             PFNGP +AK+  +N+PLGKIGEHVGDWEHVTLR+SNF  ELW VYFSEHSGG+W+NAS+
Sbjct: 357  CPFNGPAKAKIEFLNVPLGKIGEHVGDWEHVTLRVSNFNSELWSVYFSEHSGGSWINASQ 416

Query: 1454 VEYHSANNIVAYASLHGHAFYSKPGLVLQGNSNLDIGIRNDTAKSNIVIDTSMRYEVIS 1630
            +E+ S N  V Y+SLHGHA YSKPGLVLQGN+   IGIRNDTAKS  ++DT  ++ V++
Sbjct: 417  LEFQSGNKFVGYSSLHGHAMYSKPGLVLQGNNG--IGIRNDTAKSGKILDTGAKFSVVA 473


>ref|XP_002330905.1| predicted protein [Populus trichocarpa] gi|222872727|gb|EEF09858.1|
            predicted protein [Populus trichocarpa]
          Length = 587

 Score =  597 bits (1538), Expect = e-168
 Identities = 294/516 (56%), Positives = 357/516 (69%), Gaps = 40/516 (7%)
 Frame = +2

Query: 203  MGNCLPTAPS----------NSHLPIETVFKLPSQVPPWPQXXXXXXXXXXXXX------ 334
            MG+CL +  S             LPI+  FKLP+ +P WP                    
Sbjct: 1    MGSCLSSRQSAISCEGVSKKQKVLPIDASFKLPAPLPSWPPGRFLFLFPFWSFLPSLMLS 60

Query: 335  ------------------------LEVRQISTFQKVWATLEGGPDNLGATFFEPWPIPDG 442
                                    L+V QIS+F KVWAT EGGPD+LGA+FFEP  +P G
Sbjct: 61   HCLYRPANLVCGGFGSGIIDLGDGLQVCQISSFNKVWATHEGGPDDLGASFFEPSQLPQG 120

Query: 443  FFMLGCYAQPNNKSLFGWVLVGKDVQNDPSQGTLKMPVDYRLVWSSESMKMKKEGNGYIW 622
            F MLGCY+QPNN+SL+GWVL G+D     +   LK P+DY LVWSSES+++K++G GYIW
Sbjct: 121  FSMLGCYSQPNNRSLYGWVLAGRD----ETGSALKQPIDYTLVWSSESLQIKQDGVGYIW 176

Query: 623  LPIPPDGYTAGGLILTNSPTKPPLEKVRCVHSDLADLCEQDTWIWGTDRESNTSEVSVYG 802
            LP PPDGY A G ++T SP KPPL K+RCV SDL + CE D+W+WG  +ES+ +  +V+ 
Sbjct: 177  LPTPPDGYKALGHVVTKSPQKPPLGKIRCVRSDLTEQCEFDSWVWGLGKESDLNGFNVFS 236

Query: 803  LRPTIRSTRALGVSIGTFTVQLTGVDTALSLSCLKSADSNFSCMPNLTQIKALVQAYSPS 982
            L P+ R T+A+GV +GTF  Q T     +SLSCLK+  SN SCMPNL QIKA+ QAYSP 
Sbjct: 237  LFPSNRGTQAMGVCVGTFVAQKT-TTAPVSLSCLKNVVSNLSCMPNLDQIKAIFQAYSPW 295

Query: 983  IYLHPDETYMASSVNWFFNNGALLYKKGDESNPVSIDPNGSNLPQGGSNDGEYWLDLPVD 1162
            IY HPDE Y+ SSV W+F NGALLY++G+ES PV I+ NGSNLPQGGSNDG YWLDLPV+
Sbjct: 296  IYFHPDEEYLPSSVEWYFVNGALLYERGEESKPVPIESNGSNLPQGGSNDGAYWLDLPVE 355

Query: 1163 KGARDEVMKGDLQSSTAYLHIKPMLGATFTDISTWIFYPFNGPGRAKLRLINIPLGKIGE 1342
            +GA+D V KGDLQ S  YLHIKPM GA FTDI  W+FYPFNGP +AK+  INIPLGKIGE
Sbjct: 356  EGAKDRVKKGDLQDSRVYLHIKPMFGAAFTDIVVWVFYPFNGPSKAKVEFINIPLGKIGE 415

Query: 1343 HVGDWEHVTLRISNFTGELWRVYFSEHSGGTWVNASEVEYHSANNIVAYASLHGHAFYSK 1522
            HVGDWEH+TLRISNF GEL  +YFSEHSGGTWVN+SE+E+ + N  V Y+SLHGHA Y+K
Sbjct: 416  HVGDWEHLTLRISNFNGELLSIYFSEHSGGTWVNSSELEFQNGNKAVTYSSLHGHAMYAK 475

Query: 1523 PGLVLQGNSNLDIGIRNDTAKSNIVIDTSMRYEVIS 1630
            PGLVLQG+ +  IGIRNDTAKS   IDT     V++
Sbjct: 476  PGLVLQGSGS--IGIRNDTAKSKKFIDTGTNSLVVA 509


>ref|XP_002325025.1| predicted protein [Populus trichocarpa] gi|222866459|gb|EEF03590.1|
            predicted protein [Populus trichocarpa]
          Length = 546

 Score =  595 bits (1533), Expect = e-167
 Identities = 290/477 (60%), Positives = 348/477 (72%), Gaps = 1/477 (0%)
 Frame = +2

Query: 203  MGNCLPTAPSNSHLPIETVFKLPSQVPPWPQXXXXXXXXXXXXX-LEVRQISTFQKVWAT 379
            MGN   T+ +   LPI T FKLPS +P  PQ              L+V Q+ +  K+WAT
Sbjct: 1    MGN--GTSATKEALPIATPFKLPSPLPSLPQGEGFGNGIINLGSGLQVCQVVSLNKIWAT 58

Query: 380  LEGGPDNLGATFFEPWPIPDGFFMLGCYAQPNNKSLFGWVLVGKDVQNDPSQGTLKMPVD 559
             EGGPDNLGATFFEP  +P GF MLGCY+QPNN+ L GWVL GKD   +     L  PVD
Sbjct: 59   NEGGPDNLGATFFEPSQMPQGFSMLGCYSQPNNRMLHGWVLAGKDETGE----ALTKPVD 114

Query: 560  YRLVWSSESMKMKKEGNGYIWLPIPPDGYTAGGLILTNSPTKPPLEKVRCVHSDLADLCE 739
            Y LVWSSES+++K+EG GYIWLP P DGY A G ++T SP KP LEKVRCV SDL D C+
Sbjct: 115  YTLVWSSESLQIKQEGVGYIWLPTPLDGYKALGCVVTTSPEKPSLEKVRCVRSDLTDDCQ 174

Query: 740  QDTWIWGTDRESNTSEVSVYGLRPTIRSTRALGVSIGTFTVQLTGVDTALSLSCLKSADS 919
             D WIWG  +ES+ +  +V+ LRP+ R T+A+GVS+GTF  Q T    ++SL+CLK+ +S
Sbjct: 175  IDKWIWGQGKESDPNGFNVFSLRPSNRGTQAMGVSVGTFVAQNT-TSASISLACLKNIES 233

Query: 920  NFSCMPNLTQIKALVQAYSPSIYLHPDETYMASSVNWFFNNGALLYKKGDESNPVSIDPN 1099
            N SCMP L Q++A+ QAYSP IY HPDE Y+ SS  W+F NGALLYKK +ES PV I+  
Sbjct: 234  NLSCMPTLDQVQAIFQAYSPRIYFHPDEEYLPSSARWYFTNGALLYKKDEESKPVPIEST 293

Query: 1100 GSNLPQGGSNDGEYWLDLPVDKGARDEVMKGDLQSSTAYLHIKPMLGATFTDISTWIFYP 1279
            GSNLPQGGSNDG YWLDLPV++ AR+ V +GDLQ    YLHIKPMLGATFTDI  W+FYP
Sbjct: 294  GSNLPQGGSNDGSYWLDLPVEEAARERVKRGDLQDCQVYLHIKPMLGATFTDIVAWLFYP 353

Query: 1280 FNGPGRAKLRLINIPLGKIGEHVGDWEHVTLRISNFTGELWRVYFSEHSGGTWVNASEVE 1459
            FNGPGRAK+ LI +PLGK G+HVGDWEHVTLRISNF G+L  +Y S HSGGTW +ASE+E
Sbjct: 354  FNGPGRAKVDLITVPLGKTGQHVGDWEHVTLRISNFNGQLCGIYLSAHSGGTWYDASELE 413

Query: 1460 YHSANNIVAYASLHGHAFYSKPGLVLQGNSNLDIGIRNDTAKSNIVIDTSMRYEVIS 1630
            +   N  V Y+SL+GHA Y+KPGLVLQG+ N  IGIRNDTAKSN  IDT  R+ V+S
Sbjct: 414  FQDGNKAVIYSSLNGHAMYAKPGLVLQGSGN--IGIRNDTAKSNKFIDTGARFSVVS 468


Top