BLASTX nr result

ID: Coptis23_contig00013142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013142
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604836.1| hypothetical protein MTR_4g019310 [Medicago ...    82   5e-20
gb|AFK41672.1| unknown [Medicago truncatula]                           82   1e-19
ref|XP_003530230.1| PREDICTED: uncharacterized protein LOC100778...    69   2e-18
emb|CBI36674.3| unnamed protein product [Vitis vinifera]               80   4e-17
ref|XP_002299837.1| predicted protein [Populus trichocarpa] gi|2...    80   4e-17

>ref|XP_003604836.1| hypothetical protein MTR_4g019310 [Medicago truncatula]
           gi|355505891|gb|AES87033.1| hypothetical protein
           MTR_4g019310 [Medicago truncatula]
          Length = 474

 Score = 82.4 bits (202), Expect(2) = 5e-20
 Identities = 41/70 (58%), Positives = 51/70 (72%), Gaps = 10/70 (14%)
 Frame = -3

Query: 435 LRILVDKKRDRVVFAESDKDFVDILFSFLTLPLGTIVRLIR----------NQAPPSVLG 286
           LR+LVDK+++RVV AES  D +DILFSFLTLPLGTI+RL+           N  P  +LG
Sbjct: 11  LRLLVDKEKNRVVVAESKSDLIDILFSFLTLPLGTIIRLVSKNQHDHIHEINDQPEEILG 70

Query: 285 CLNNLYKSLE 256
           C+NNLYKS+E
Sbjct: 71  CINNLYKSVE 80



 Score = 40.0 bits (92), Expect(2) = 5e-20
 Identities = 18/30 (60%), Positives = 21/30 (70%)
 Frame = -1

Query: 161 KAMLLRPSNSSEHLCRKLKFNIDDTEPTKY 72
           K MLL P N  E LC+KLK N+DD+E  KY
Sbjct: 93  KTMLLCPRNPCEILCKKLKLNLDDSETIKY 122


>gb|AFK41672.1| unknown [Medicago truncatula]
          Length = 500

 Score = 82.4 bits (202), Expect(2) = 1e-19
 Identities = 41/70 (58%), Positives = 51/70 (72%), Gaps = 10/70 (14%)
 Frame = -3

Query: 435 LRILVDKKRDRVVFAESDKDFVDILFSFLTLPLGTIVRLIR----------NQAPPSVLG 286
           LR+LVDK+++RVV AES  D +DILFSFLTLPLGTI+RL+           N  P  +LG
Sbjct: 11  LRLLVDKEKNRVVVAESKSDLIDILFSFLTLPLGTIIRLVSKNQHDHIHEINDQPEEILG 70

Query: 285 CLNNLYKSLE 256
           C+NNLYKS+E
Sbjct: 71  CINNLYKSVE 80



 Score = 38.5 bits (88), Expect(2) = 1e-19
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = -1

Query: 161 KAMLLRPSNSSEHLCRKLKFNIDDTEPTKY 72
           K +LL P N  E LC+KLK N+DD+E  KY
Sbjct: 93  KTVLLCPRNPCEILCKKLKLNLDDSETIKY 122


>ref|XP_003530230.1| PREDICTED: uncharacterized protein LOC100778734 [Glycine max]
          Length = 379

 Score = 68.6 bits (166), Expect(2) = 2e-18
 Identities = 32/61 (52%), Positives = 49/61 (80%), Gaps = 2/61 (3%)
 Frame = -3

Query: 435 LRILVDKKRDRVVFAESDKDFVDILFSFLTLPLGTIVRLIRNQAP--PSVLGCLNNLYKS 262
           L+++V+K+ ++VVFAE+ KDFVD+L SFLT PLGTI RL++  +   P  +GCL++LY+S
Sbjct: 39  LKLVVNKETNKVVFAEAGKDFVDVLLSFLTFPLGTIARLVQKDSDVGPVQVGCLSSLYES 98

Query: 261 L 259
           +
Sbjct: 99  V 99



 Score = 48.9 bits (115), Expect(2) = 2e-18
 Identities = 22/30 (73%), Positives = 24/30 (80%)
 Frame = -1

Query: 161 KAMLLRPSNSSEHLCRKLKFNIDDTEPTKY 72
           K MLL+P NSSE  CR LK NIDDTEPTK+
Sbjct: 113 KEMLLQPRNSSEDYCRSLKLNIDDTEPTKH 142


>emb|CBI36674.3| unnamed protein product [Vitis vinifera]
          Length = 612

 Score = 79.7 bits (195), Expect(2) = 4e-17
 Identities = 39/60 (65%), Positives = 51/60 (85%)
 Frame = -3

Query: 435 LRILVDKKRDRVVFAESDKDFVDILFSFLTLPLGTIVRLIRNQAPPSVLGCLNNLYKSLE 256
           L++ VDK+R+RV+FAESDKDFVDILFSFLTLP+GTI+RL   +   S +GC++ LYKS+E
Sbjct: 128 LKLAVDKERNRVLFAESDKDFVDILFSFLTLPIGTIIRLAERR---SGIGCMDYLYKSVE 184



 Score = 33.1 bits (74), Expect(2) = 4e-17
 Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -1

Query: 161 KAMLLRPSNSSEHLCRKLKFNIDDTEPTK-YRC 66
           K MLL P ++ E  CR L   ID TEP K Y C
Sbjct: 197 KTMLLNPRSAYEVHCRNLALKIDGTEPAKHYTC 229



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/59 (45%), Positives = 45/59 (76%)
 Frame = -3

Query: 435 LRILVDKKRDRVVFAESDKDFVDILFSFLTLPLGTIVRLIRNQAPPSVLGCLNNLYKSL 259
           +++L+DK   RV+  E+ +DFV+++ SFLT PLG+I++L+R     S LGC++NLY+S+
Sbjct: 383 VKLLIDKSSRRVLCLEAKEDFVNLVLSFLTFPLGSIIKLLRGH---SSLGCMDNLYRSV 438


>ref|XP_002299837.1| predicted protein [Populus trichocarpa] gi|222847095|gb|EEE84642.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score = 79.7 bits (195), Expect(2) = 4e-17
 Identities = 38/60 (63%), Positives = 48/60 (80%)
 Frame = -3

Query: 435 LRILVDKKRDRVVFAESDKDFVDILFSFLTLPLGTIVRLIRNQAPPSVLGCLNNLYKSLE 256
           L+  VDKK +RVVF ESD+ FVDILFSFLT+P+GTI+ LI N +P +   C+NNLYKS+E
Sbjct: 6   LKASVDKKSNRVVFVESDEFFVDILFSFLTMPMGTIIHLISNLSPTNGFVCMNNLYKSVE 65



 Score = 33.1 bits (74), Expect(2) = 4e-17
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -1

Query: 161 KAMLLRPSNSSEHLCRKLKFNIDDTEPTKYRCHHDS 54
           K MLL P N++   C+ LK  IDD + + + C   S
Sbjct: 78  KQMLLHPHNAAAAYCKSLKLKIDDIDTSSFFCCESS 113


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