BLASTX nr result

ID: Coptis23_contig00013129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013129
         (2968 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   557   e-156
ref|XP_002314910.1| predicted protein [Populus trichocarpa] gi|2...   529   e-147
emb|CBI27416.3| unnamed protein product [Vitis vinifera]              525   e-146
ref|XP_002514566.1| conserved hypothetical protein [Ricinus comm...   497   e-138
ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like ...   436   e-119

>ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
            [Vitis vinifera]
          Length = 609

 Score =  557 bits (1436), Expect = e-156
 Identities = 319/582 (54%), Positives = 381/582 (65%), Gaps = 53/582 (9%)
 Frame = +2

Query: 803  MDSGDKDKF----------------VSPDWRFNDAAG-IASQPLGLVPTENSVAISKGDL 931
            MD  DKDKF                +S DWRF    G + +  +  V   N +A+ KGDL
Sbjct: 34   MDMSDKDKFELEKRSGDSLNYHSASMSSDWRFGGGGGNLTNTSMSTVQGGNPMAVCKGDL 93

Query: 932  M------SSSMVDSFCPTLWDHP-NSHSLGFMENNVHQTSTSTSNTAGLRKGVPVTSRSG 1090
            +      S+SMVDSF P LWDHP NS +LGF + NV Q + STS+T G+RKG P + R  
Sbjct: 94   VGSSSCSSASMVDSFGPNLWDHPANSQTLGFCDMNV-QNNASTSSTLGIRKGGPGSLRMD 152

Query: 1091 MENALDMGWNSPNLMLREGAFLQNNARNLPPSLSQFPADSGFIERAARFSCFNGGNFGDI 1270
            ++  LD+GWN P+ ML+ G FL N    LP  LSQFPADSGFIERAARFSCFNGGNF D+
Sbjct: 153  IDKTLDIGWNPPSSMLKGGIFLPNAPGMLPQGLSQFPADSGFIERAARFSCFNGGNFSDM 212

Query: 1271 VNPFNLSEPMNPYSKG----PQDVLSANGMNPLLGAESQKSELNMAEIAKDHSMSVEHGA 1438
            +NPF++ E +NPYS+G     QDV ++NG+  + G +SQK E +MAEI+KD S +V  GA
Sbjct: 213  MNPFSIPESLNPYSRGGGMLQQDVFASNGLKSVPGGQSQKDEPSMAEISKDVSSAVR-GA 271

Query: 1439 AGTSPVKNDIEKRGYGRPSDEARQGTNLXXXXXXXXXXXXXXXXXXXXXX---NAGGEPS 1609
               SP+KN+ +     +  +EA+QG  +                           GGEPS
Sbjct: 272  MEGSPLKNERKSESLVKSLEEAKQGIGVSGNESDEAEFSGGGGGGQEEPSILEGTGGEPS 331

Query: 1610 SVXXXXXXXXXXXXQNAETDQDKGASQHSGEPAK--------GDDK-----SKTATKPGK 1750
            S             Q+ E DQ KG+ Q  GE +K        GD       SK   K GK
Sbjct: 332  SGKGLGSKKRKRSGQDPEIDQVKGSPQQPGEASKDNPEIQHKGDQNPSSVPSKNTGKHGK 391

Query: 1751 DGSQASDAPKEDYIHIRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAV 1930
             G+QASD PKE+YIH+RARRGQATNSHSLAERVRREKISERMKFLQ+LVPGCSKVTGKAV
Sbjct: 392  QGAQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAV 451

Query: 1931 MLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGILAKD--------ILQSRVGP-ST 2083
            MLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEG+L KD        ILQSRVGP ST
Sbjct: 452  MLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGMLGKDVSEIAXQKILQSRVGPSST 511

Query: 2084 LGFSPDMNMVHPQLHPSQQSLIQGGISGLVNSSDALRRTISSQLAALNSGYKDLMPQNHQ 2263
            +GFSP+  M +PQLHPSQ  LIQ G+ GL NSSDA+RRTI+SQLAA++ GYK+  P    
Sbjct: 512  MGFSPETTMPYPQLHPSQPGLIQVGLPGLGNSSDAIRRTINSQLAAMSGGYKESAP---- 567

Query: 2264 QIPSGWDDELHNVVQMSYGANGPFNNQDLNGSLPPGHMKVEL 2389
            Q+P+ W+DELHNVVQM +    P N+QDLNGSLPPGHMK EL
Sbjct: 568  QLPNVWEDELHNVVQMGFSTGAPLNSQDLNGSLPPGHMKAEL 609


>ref|XP_002314910.1| predicted protein [Populus trichocarpa] gi|222863950|gb|EEF01081.1|
            predicted protein [Populus trichocarpa]
          Length = 562

 Score =  529 bits (1363), Expect = e-147
 Identities = 298/569 (52%), Positives = 369/569 (64%), Gaps = 40/569 (7%)
 Frame = +2

Query: 803  MDSGDKDKF-----------------VSPDWRFNDAAGIASQPLGLVPTENSVAISKGDL 931
            MD  DKDKF                 +S DWRFN  + I +  LGLVP +N +++ +GDL
Sbjct: 1    MDMSDKDKFELGKSNDNPINYHSPGGLSSDWRFNSTS-IPNSSLGLVPIDNQMSVCRGDL 59

Query: 932  M------SSSMVDSFCPTLWDHP-NSHSLGFMENNVHQTSTSTSNTAGLRKGVPVTSRSG 1090
            +      S+S++DSF P +W+HP NS +L F + NV Q   S+SNT G+ KG P + R+G
Sbjct: 60   VGAASCSSASVIDSFGPAMWEHPTNSQNLVFCDINV-QNIASSSNTVGIGKGAPASLRNG 118

Query: 1091 MENALDMGWNSPNLMLREGAFLQNNARNLPPSLSQFPADSGFIERAARFSCFNGGNFGDI 1270
            ++  L+MGWN PN ML+ G FL N    LP SLSQFPADS FIERAARFSCFNGG+FGD+
Sbjct: 119  IDRTLEMGWNPPNSMLKGGNFLPNAPGMLPQSLSQFPADSAFIERAARFSCFNGGDFGDM 178

Query: 1271 VNPFNLSEPMNPYSKG------PQDVLSANGMNPLLGAESQKSELNMAEIAKDHSMSVEH 1432
            VNPF + E M  +S+G      P +V   +GM  + G ++QK+ +N  E +KD SMSV+H
Sbjct: 179  VNPFGVPESMGLFSRGGGMMQGPGEVFVGSGMKSVSGGQAQKNVMNAGEASKDVSMSVDH 238

Query: 1433 GAAGTSPVKNDIEKRGYGRPSDEARQGTNLXXXXXXXXXXXXXXXXXXXXXXNAGGEPSS 1612
             A   SP+KN+ ++    R  DEA++G                                S
Sbjct: 239  MATEGSPLKNETKRESLARSRDEAKKGVGGSGNDSDEAEFSGGSGQDEPSLLEGNCGELS 298

Query: 1613 VXXXXXXXXXXXXQNAETDQDKGASQHS-GEPA---KGDDK-----SKTATKPGKDGSQA 1765
                         ++AE DQ KG  Q + G P    KGD K     SK + K GK GSQ 
Sbjct: 299  AKSLGSKKRKRSGEDAELDQAKGTPQSAKGSPETQQKGDQKPTSTTSKASGKQGKQGSQG 358

Query: 1766 SDAPKEDYIHIRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEI 1945
            SD PKE+YIH+RARRGQATNSHSLAERVRREKISERMKFLQ+LVPGCSKVTGKAVMLDEI
Sbjct: 359  SDQPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 418

Query: 1946 INYVQSLQRQVEFLSMKLATVNPRLDFNIEGILAKDILQSR-VGPSTLGFSPDMNMVHPQ 2122
            INYVQSLQRQVEFLSMKLATVNPRLDFNIEG+LAKDILQSR V PS+L FS +M M +P 
Sbjct: 419  INYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDILQSRAVPPSSLAFSSEMPMAYPA 478

Query: 2123 LHPSQQSLIQGGISGLVNSSDALRRTISSQLAALNSGYKDLMPQNHQQIPSGWDDELHNV 2302
            LH SQ  LI     G+ + SD +RRTI+SQL A+ +G+K+       Q+P+ WDDELHNV
Sbjct: 479  LHQSQPGLIPTAFPGMESHSDIIRRTINSQLTAMTAGFKE-----PAQLPNVWDDELHNV 533

Query: 2303 VQMSYGANGPFNNQDLNGSLPPGHMKVEL 2389
            VQM+YG + P ++QD+N  LPPGH+KVEL
Sbjct: 534  VQMTYGTSAPQDSQDVNEPLPPGHLKVEL 562


>emb|CBI27416.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score =  525 bits (1353), Expect = e-146
 Identities = 304/570 (53%), Positives = 357/570 (62%), Gaps = 41/570 (7%)
 Frame = +2

Query: 803  MDSGDKDKF----------------VSPDWRFNDAAGIASQPLGLVPTENSVAISKGDLM 934
            MD  DKDKF                +S DWRF                     + KGDL+
Sbjct: 1    MDMSDKDKFELEKRSGDSLNYHSASMSSDWRFG-------------------GVCKGDLV 41

Query: 935  ------SSSMVDSFCPTLWDHP-NSHSLGFMENNVHQTSTSTSNTAGLRKGVPVTSRSGM 1093
                  S+SMVDSF P LWDHP NS +LGF + NV Q + STS+T G+RKG P + R  +
Sbjct: 42   GSSSCSSASMVDSFGPNLWDHPANSQTLGFCDMNV-QNNASTSSTLGIRKGGPGSLRMDI 100

Query: 1094 ENALDMGWNSPNLMLREGAFLQNNARNLPPSLSQFPADSGFIERAARFSCFNGGNFGDIV 1273
            +  LD+GWN P+ ML+ G FL N    LP  LSQFPADSGFIERAARFSCFNGGNF D++
Sbjct: 101  DKTLDIGWNPPSSMLKGGIFLPNAPGMLPQGLSQFPADSGFIERAARFSCFNGGNFSDMM 160

Query: 1274 NPFNLSEPMNPYSKG----PQDVLSANGMNPLLGAESQKSELNMAEIAKDHSMSVEHGAA 1441
            NPF++ E +NPYS+G     QDV ++NG+  + G +SQK E +MAEI+KD S + ++   
Sbjct: 161  NPFSIPESLNPYSRGGGMLQQDVFASNGLKSVPGGQSQKDEPSMAEISKDVSSAKQNKEL 220

Query: 1442 GTSPVKNDIEKRGYGRPSDEARQGTNLXXXXXXXXXXXXXXXXXXXXXXNAGGEPSSVXX 1621
            G                                                   GEPSS   
Sbjct: 221  GC--------------------------------------------------GEPSSGKG 230

Query: 1622 XXXXXXXXXXQNAETDQDKGASQHSGEPAK--------GDDK-----SKTATKPGKDGSQ 1762
                      Q+ E DQ KG+ Q  GE +K        GD       SK   K GK G+Q
Sbjct: 231  LGSKKRKRSGQDPEIDQVKGSPQQPGEASKDNPEIQHKGDQNPSSVPSKNTGKHGKQGAQ 290

Query: 1763 ASDAPKEDYIHIRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDE 1942
            ASD PKE+YIH+RARRGQATNSHSLAERVRREKISERMKFLQ+LVPGCSKVTGKAVMLDE
Sbjct: 291  ASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE 350

Query: 1943 IINYVQSLQRQVEFLSMKLATVNPRLDFNIEGILAKDILQSRVGP-STLGFSPDMNMVHP 2119
            IINYVQSLQRQVEFLSMKLATVNPRLDFNIEG+L KDILQSRVGP ST+GFSP+  M +P
Sbjct: 351  IINYVQSLQRQVEFLSMKLATVNPRLDFNIEGMLGKDILQSRVGPSSTMGFSPETTMPYP 410

Query: 2120 QLHPSQQSLIQGGISGLVNSSDALRRTISSQLAALNSGYKDLMPQNHQQIPSGWDDELHN 2299
            QLHPSQ  LIQ G+ GL NSSDA+RRTI+SQLAA++ GYK+  P    Q+P+ W+DELHN
Sbjct: 411  QLHPSQPGLIQVGLPGLGNSSDAIRRTINSQLAAMSGGYKESAP----QLPNVWEDELHN 466

Query: 2300 VVQMSYGANGPFNNQDLNGSLPPGHMKVEL 2389
            VVQM +    P N+QDLNGSLPPGHMK EL
Sbjct: 467  VVQMGFSTGAPLNSQDLNGSLPPGHMKAEL 496


>ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
            gi|223546170|gb|EEF47672.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 566

 Score =  497 bits (1280), Expect = e-138
 Identities = 289/548 (52%), Positives = 348/548 (63%), Gaps = 28/548 (5%)
 Frame = +2

Query: 830  VSPDWRFNDAAGIASQPLGLVPTENSVAISKGDLM------SSSMVDSFCPTLWDHP-NS 988
            ++ DWRF  ++ I +  LGLVPT+N + + +GDL+      ++SMVDSF P LWDH  NS
Sbjct: 27   MTSDWRFG-SSNITNTSLGLVPTDNQMPVCRGDLLGASSCSTASMVDSFGPGLWDHSTNS 85

Query: 989  HSLGFMENNVHQTSTSTSNTAGLRKGVPVTSRSGMENALDMGWNSPNLMLREGAFLQNNA 1168
             +LGF + NV Q   STSNT G RK  P + R G + AL MGWN P+ ML+ G FL +  
Sbjct: 86   LNLGFCDINV-QNHPSTSNTIGHRKSGPTSLRVGTDKALQMGWNPPSSMLKGGIFLPSAP 144

Query: 1169 RNLPPSLSQFPADSGFIERAARFSCFNGGNFGDIVNPFNLSEPMNPYSK------GPQDV 1330
              LP SLSQFPADS FIERAARFSCFNGGNF D++NPF + E M  YS+      GPQ+V
Sbjct: 145  GVLPQSLSQFPADSAFIERAARFSCFNGGNFSDMMNPFGIPESMGLYSRSGGMMQGPQEV 204

Query: 1331 LSANGMNPLLGAESQKSELNMAEIAKDHSMSVEHGAAGTSPVKNDIEKRGYGRPSDEARQ 1510
             +A+G+  + G + Q +   + E +KD SMS+EH  A   P+KN+ +     R +DEA+Q
Sbjct: 205  FAASGLKTVTGGQGQNNVTIVGETSKDASMSIEH-VAIEGPLKNERKSDSLVRSNDEAKQ 263

Query: 1511 GTNLXXXXXXXXXXXXXXXXXXXXXXNAGGEPSSVXXXXXXXXXXXXQNAETDQDKG--- 1681
            G                            G   S             Q+ E DQ KG   
Sbjct: 264  GAGGSGDESEEAEFSGGGGQEEASTLEGNGMELSAKSLGLKKRKRNGQDIELDQAKGNLQ 323

Query: 1682 ---------ASQHSGEPAKGDDKSKTATKPGKDGSQASDAPKEDYIHIRARRGQATNSHS 1834
                      +Q  G+       +KT+ K GK GSQASD PKE+YIH+RARRGQATNSHS
Sbjct: 324  SVEAAKDNVEAQQKGDQTPTSTPNKTSGKQGKQGSQASDPPKEEYIHVRARRGQATNSHS 383

Query: 1835 LAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 2014
            LAERVRREKISERMKFLQ+LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP
Sbjct: 384  LAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 443

Query: 2015 RLDFNIEGILAKDILQSRVGP-STLGFSPDMNMVHPQLHPSQQSLIQGGISGLVNSSDAL 2191
            RLDFNIEG+LAKDIL SR  P STL FSPDM M +P  + SQ  LIQ    G+ + SD L
Sbjct: 444  RLDFNIEGLLAKDILHSRAVPSSTLAFSPDMIMAYPPFNTSQPGLIQASFPGMESHSDVL 503

Query: 2192 RRTISSQLAALNSGYKDLMPQNHQQIPSGWDDELHNVVQMSYGANGPFNNQDLN-GSLP- 2365
            RRTISSQL  L+  +K+       Q+P+ WDDELHNVVQM YG     ++QD+N GSLP 
Sbjct: 504  RRTISSQLTPLSGVFKE-----PTQLPNAWDDELHNVVQMGYGTGTTQDSQDVNAGSLPA 558

Query: 2366 PGHMKVEL 2389
             G MK EL
Sbjct: 559  AGQMKAEL 566


>ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
          Length = 551

 Score =  436 bits (1121), Expect = e-119
 Identities = 270/546 (49%), Positives = 334/546 (61%), Gaps = 29/546 (5%)
 Frame = +2

Query: 839  DWRFNDAAGIASQPLGLVPT-ENSVAISKGDLM------SSSMVDSFCPTLWDHP-NSHS 994
            DWRF   + +A+  +G V    NS+ +S+GDL+      S+SMVDS  P  W++P +S  
Sbjct: 25   DWRFG-GSNLANSSVGFVGLGNNSMNVSRGDLIGSSSCSSASMVDSLSPNYWENPTSSQK 83

Query: 995  LGFME-NNVHQTSTSTSNTAGLRKGVPVTSRSGMEN--ALDMGWNSPNLMLREGAFLQNN 1165
            LGF + NNVH    S+S T  +RK      R G ++   L+MGWN  N ML  G  +   
Sbjct: 84   LGFCDINNVHNNGGSSS-TVAIRKDGFGFGRVGQDHHGTLEMGWNHANSMLPNGPVM--- 139

Query: 1166 ARNLPPSLSQFPADSGFIERAARFSCFNGGNFGDIVNPFNLSEPMNPYSKGPQDVLSANG 1345
                P SLSQFP DSGFIERAARFSCF+GGNFGD+VN + +++ M  Y  G +D ++ +G
Sbjct: 140  ---FPHSLSQFPTDSGFIERAARFSCFSGGNFGDMVNSYGIAQSMGLY--GARDAIAGHG 194

Query: 1346 MNPLL-GAESQKSELNMAEIAKDHSMSVEH-GAAGTSPVKNDIEKRGYGRPSDEARQGT- 1516
            +  ++ G +SQ  ++N+ E   D   SVEH  AA  SP+K+D    G+    DE +Q   
Sbjct: 195  LKSVIAGGQSQGGDMNVVE---DVPPSVEHLVAAKGSPLKSDRRSEGHVIFQDEGKQSLV 251

Query: 1517 -NLXXXXXXXXXXXXXXXXXXXXXXNAGGEPSSVXXXXXXXXXXXXQNAETDQDKGASQH 1693
             N                          GEPSS             ++ + D+  GA + 
Sbjct: 252  RNANESDRAESSDDGGGQDDSPMLEGTSGEPSS-KGLNSKKRKRSGRDGDNDKANGAQEL 310

Query: 1694 SGEPAKGDDKS-------------KTATKPGKDGSQASDAPKEDYIHIRARRGQATNSHS 1834
              E AKG+ ++             K   K  K GSQASD PKE+YIH+RARRGQATNSHS
Sbjct: 311  PSEGAKGNSENQQKGDQQPISTANKACGKNAKLGSQASDPPKEEYIHVRARRGQATNSHS 370

Query: 1835 LAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 2014
            LAERVRREKISERMKFLQ+LVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP
Sbjct: 371  LAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 430

Query: 2015 RLDFNIEGILAKDILQSRVGPST-LGFSPDMNMVHPQLHPSQQSLIQGGISGLVNSSDAL 2191
            RLDFNIEG+LAKDILQ R  PST LGF  DM+M  P LHP Q  LI   I  + NSSD L
Sbjct: 431  RLDFNIEGLLAKDILQQRPDPSTALGFPLDMSMAFPPLHPPQPGLIHPVIPNMTNSSDIL 490

Query: 2192 RRTISSQLAALNSGYKDLMPQNHQQIPSGWDDELHNVVQMSYGANGPFNNQDLNGSLPPG 2371
            +RTI  QLA LN G+K+       Q+P  W+DELHNVVQMS+    P  +QD++G+ P  
Sbjct: 491  QRTIHPQLAPLNGGFKE-----PNQLPDVWEDELHNVVQMSFATTAPPTSQDVDGTGPAS 545

Query: 2372 HMKVEL 2389
             MKVEL
Sbjct: 546  QMKVEL 551


Top