BLASTX nr result

ID: Coptis23_contig00013127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013127
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167725.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRN...   120   1e-25
ref|XP_004148403.1| PREDICTED: glutamyl-tRNA reductase 1, chloro...   120   1e-25
emb|CBI19316.3| unnamed protein product [Vitis vinifera]              119   2e-25
ref|XP_002285583.1| PREDICTED: glutamyl-tRNA reductase 1, chloro...   119   2e-25
emb|CAN88916.1| glutamyl tRNA Reductase [Nicotiana tabacum]           117   7e-25

>ref|XP_004167725.1| PREDICTED: LOW QUALITY PROTEIN: glutamyl-tRNA reductase 1,
           chloroplastic-like [Cucumis sativus]
          Length = 552

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/80 (73%), Positives = 73/80 (91%)
 Frame = +1

Query: 1   SKIKHDIPKKTRRAIEDLSRGMMNKVLHGPMEHLRCDESNSRPLSEILENMHALNSRMFS 180
           SK+  DIPKKTRRA++DLSRG++NK+LHGPM+HLRCD S+SR LSE LENMHALN RMFS
Sbjct: 473 SKMGDDIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALN-RMFS 531

Query: 181 LETDASLLEQKIRAKMEQSR 240
           LET+ ++LEQKIRAK+EQ++
Sbjct: 532 LETEIAVLEQKIRAKVEQNQ 551


>ref|XP_004148403.1| PREDICTED: glutamyl-tRNA reductase 1, chloroplastic-like [Cucumis
           sativus] gi|2495155|sp|P93111.1|HEM11_CUCSA RecName:
           Full=Glutamyl-tRNA reductase 1, chloroplastic;
           Short=GluTR; Flags: Precursor gi|1694926|dbj|BAA08910.1|
           glutamyl-tRNA reductase [Cucumis sativus]
          Length = 552

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/80 (73%), Positives = 73/80 (91%)
 Frame = +1

Query: 1   SKIKHDIPKKTRRAIEDLSRGMMNKVLHGPMEHLRCDESNSRPLSEILENMHALNSRMFS 180
           SK+  DIPKKTRRA++DLSRG++NK+LHGPM+HLRCD S+SR LSE LENMHALN RMFS
Sbjct: 473 SKMGDDIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALN-RMFS 531

Query: 181 LETDASLLEQKIRAKMEQSR 240
           LET+ ++LEQKIRAK+EQ++
Sbjct: 532 LETEIAVLEQKIRAKVEQNQ 551


>emb|CBI19316.3| unnamed protein product [Vitis vinifera]
          Length = 510

 Score =  119 bits (299), Expect = 2e-25
 Identities = 60/80 (75%), Positives = 72/80 (90%)
 Frame = +1

Query: 1   SKIKHDIPKKTRRAIEDLSRGMMNKVLHGPMEHLRCDESNSRPLSEILENMHALNSRMFS 180
           SK+  DI KKTRRA++DLSRG++NK+LHGPM+HLRCD S+SR LSE LENMHALN RMFS
Sbjct: 431 SKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALN-RMFS 489

Query: 181 LETDASLLEQKIRAKMEQSR 240
           LET+ SLLEQKIRAK+EQ++
Sbjct: 490 LETEISLLEQKIRAKVEQTQ 509


>ref|XP_002285583.1| PREDICTED: glutamyl-tRNA reductase 1, chloroplastic [Vitis
           vinifera] gi|147816412|emb|CAN77439.1| hypothetical
           protein VITISV_007402 [Vitis vinifera]
          Length = 545

 Score =  119 bits (299), Expect = 2e-25
 Identities = 60/80 (75%), Positives = 72/80 (90%)
 Frame = +1

Query: 1   SKIKHDIPKKTRRAIEDLSRGMMNKVLHGPMEHLRCDESNSRPLSEILENMHALNSRMFS 180
           SK+  DI KKTRRA++DLSRG++NK+LHGPM+HLRCD S+SR LSE LENMHALN RMFS
Sbjct: 466 SKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALN-RMFS 524

Query: 181 LETDASLLEQKIRAKMEQSR 240
           LET+ SLLEQKIRAK+EQ++
Sbjct: 525 LETEISLLEQKIRAKVEQTQ 544


>emb|CAN88916.1| glutamyl tRNA Reductase [Nicotiana tabacum]
          Length = 542

 Score =  117 bits (294), Expect = 7e-25
 Identities = 58/80 (72%), Positives = 72/80 (90%)
 Frame = +1

Query: 1   SKIKHDIPKKTRRAIEDLSRGMMNKVLHGPMEHLRCDESNSRPLSEILENMHALNSRMFS 180
           SK+  DI KKTR+A++DLSRG++NK+LHGPM+HLRCD S+SR LSE LENMHALN RMF+
Sbjct: 463 SKMGDDISKKTRKAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALN-RMFN 521

Query: 181 LETDASLLEQKIRAKMEQSR 240
           LETD S+LEQKIRAK+EQ++
Sbjct: 522 LETDISVLEQKIRAKVEQTQ 541


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