BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013114
         (1043 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20261.3| unnamed protein product [Vitis vinifera]              263   7e-68
ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat...   263   7e-68
emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]   261   2e-67
ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat...   260   4e-67
ref|XP_002532249.1| pentatricopeptide repeat-containing protein,...   257   3e-66

>emb|CBI20261.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  263 bits (671), Expect = 7e-68
 Identities = 136/249 (54%), Positives = 172/249 (69%), Gaps = 4/249 (1%)
 Frame = -1

Query: 1043 IFINSLTKSGKVSTATKLFRSMSENGCAPDVVICNCIIDSLCFKKRIPQALEIFKEMKER 864
            IFINSLTK+GK+STA KLF++M E GC PDV ICNCIID+LCFKKRIP+ALE+ +EM ER
Sbjct: 262  IFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNER 321

Query: 863  GCPPNVATYNSLIKHLCKIVRXXXXXXXXXXXXXXKGSCTPNEITFICLLKAAKKPDEVR 684
             C P+VATYNSLIKHLCKI R                 C PN  T+  LLK+ KKP+EV 
Sbjct: 322  DCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQK--GCLPNARTYGYLLKSTKKPEEVP 379

Query: 683  GVLERMKRNDCRVAGDTYNMMLKLFLDWNDVQGVQSVWTEMEKNGVGPDQRSYTIMIHRL 504
            G+LERM+RN CR+  D YN++LKL++DW     ++S   EME+NG+GPDQR+YTIMIH L
Sbjct: 380  GILERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRTYTIMIHGL 439

Query: 503  HKKGRVEEALKCFKEMMSKGMIQELRTDLLVTNMKTKLNERKHQHGG----CEIGEVRGS 336
            + KGR+++AL  FK+M   GM+ E RT LLV  M  KL ER+ +  G     +   +R S
Sbjct: 440  YDKGRMDDALSYFKQMTLMGMVPEPRTTLLVNAMNIKLKEREAEPEGKGARNKADSIRPS 499

Query: 335  AKQRKKNIA 309
             ++ KK  A
Sbjct: 500  TRRGKKKRA 508


>ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g15200-like [Vitis vinifera]
          Length = 546

 Score =  263 bits (671), Expect = 7e-68
 Identities = 136/249 (54%), Positives = 172/249 (69%), Gaps = 4/249 (1%)
 Frame = -1

Query: 1043 IFINSLTKSGKVSTATKLFRSMSENGCAPDVVICNCIIDSLCFKKRIPQALEIFKEMKER 864
            IFINSLTK+GK+STA KLF++M E GC PDV ICNCIID+LCFKKRIP+ALE+ +EM ER
Sbjct: 299  IFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNER 358

Query: 863  GCPPNVATYNSLIKHLCKIVRXXXXXXXXXXXXXXKGSCTPNEITFICLLKAAKKPDEVR 684
             C P+VATYNSLIKHLCKI R                 C PN  T+  LLK+ KKP+EV 
Sbjct: 359  DCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQK--GCLPNARTYGYLLKSTKKPEEVP 416

Query: 683  GVLERMKRNDCRVAGDTYNMMLKLFLDWNDVQGVQSVWTEMEKNGVGPDQRSYTIMIHRL 504
            G+LERM+RN CR+  D YN++LKL++DW     ++S   EME+NG+GPDQR+YTIMIH L
Sbjct: 417  GILERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRTYTIMIHGL 476

Query: 503  HKKGRVEEALKCFKEMMSKGMIQELRTDLLVTNMKTKLNERKHQHGG----CEIGEVRGS 336
            + KGR+++AL  FK+M   GM+ E RT LLV  M  KL ER+ +  G     +   +R S
Sbjct: 477  YDKGRMDDALSYFKQMTLMGMVPEPRTTLLVNAMNIKLKEREAEPEGKGARNKADSIRPS 536

Query: 335  AKQRKKNIA 309
             ++ KK  A
Sbjct: 537  TRRGKKKRA 545


>emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
          Length = 546

 Score =  261 bits (668), Expect = 2e-67
 Identities = 131/227 (57%), Positives = 163/227 (71%)
 Frame = -1

Query: 1043 IFINSLTKSGKVSTATKLFRSMSENGCAPDVVICNCIIDSLCFKKRIPQALEIFKEMKER 864
            IFINSLTK+GK+STA KLF++M E GC PDV ICNCIID+LCFKKRIP+ALE+ +EM ER
Sbjct: 299  IFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPEALEVLREMNER 358

Query: 863  GCPPNVATYNSLIKHLCKIVRXXXXXXXXXXXXXXKGSCTPNEITFICLLKAAKKPDEVR 684
             C P+VATYNSLIKHLCKI R                 C PN  T+  LLK+ KKP+EV 
Sbjct: 359  DCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQK--GCLPNARTYGYLLKSTKKPEEVP 416

Query: 683  GVLERMKRNDCRVAGDTYNMMLKLFLDWNDVQGVQSVWTEMEKNGVGPDQRSYTIMIHRL 504
            G+LERM+RN CR+  D YN++LKL++DW     ++S   EME+NG+GPDQR+YTIMIH L
Sbjct: 417  GILERMERNGCRMNSDCYNLILKLYMDWGYELKLRSTLDEMERNGMGPDQRTYTIMIHGL 476

Query: 503  HKKGRVEEALKCFKEMMSKGMIQELRTDLLVTNMKTKLNERKHQHGG 363
            + KGR+++AL  FK+M   GM+ E RT LLV  M  KL ER+ +  G
Sbjct: 477  YDKGRMDDALSYFKQMTLMGMVPEPRTTLLVNAMNIKLKEREAEPEG 523


>ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g15200-like [Glycine max]
          Length = 481

 Score =  260 bits (664), Expect = 4e-67
 Identities = 127/223 (56%), Positives = 162/223 (72%)
 Frame = -1

Query: 1040 FINSLTKSGKVSTATKLFRSMSENGCAPDVVICNCIIDSLCFKKRIPQALEIFKEMKERG 861
            FI +LTK GK+ TA KLFR M + G  PDVVICNCIID+LCFKKRIP+ALEIF +M ERG
Sbjct: 248  FIKALTKKGKLGTALKLFRGMWDKGGKPDVVICNCIIDALCFKKRIPEALEIFCDMSERG 307

Query: 860  CPPNVATYNSLIKHLCKIVRXXXXXXXXXXXXXXKGSCTPNEITFICLLKAAKKPDEVRG 681
            C PNVATYNSLIK++CKI R              KGSC PN +T+  LLK+ K+P EV  
Sbjct: 308  CEPNVATYNSLIKYMCKIQRMKKVYELVDEMERKKGSCLPNAVTYCYLLKSLKEPGEVCR 367

Query: 680  VLERMKRNDCRVAGDTYNMMLKLFLDWNDVQGVQSVWTEMEKNGVGPDQRSYTIMIHRLH 501
            VLERM+RN C +  D YNM+L+L++ W+D  GV+  W EME+NG GPD+RSYTIMIH   
Sbjct: 368  VLERMERNGCGMNDDVYNMVLRLYMKWDDGDGVRKTWEEMERNGWGPDRRSYTIMIHENF 427

Query: 500  KKGRVEEALKCFKEMMSKGMIQELRTDLLVTNMKTKLNERKHQ 372
            +KGRV++A++  +EM+SKGM+ E RT+ LV++M  +L  R  +
Sbjct: 428  EKGRVKDAVRYLEEMISKGMVPERRTEKLVSSMNIRLKGRSEK 470


>ref|XP_002532249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223528067|gb|EEF30143.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score =  257 bits (657), Expect = 3e-66
 Identities = 130/246 (52%), Positives = 173/246 (70%), Gaps = 3/246 (1%)
 Frame = -1

Query: 1040 FINSLTKSGKVSTATKLFRSMSENGCAPDVVICNCIIDSLCFKKRIPQALEIFKEMKERG 861
            FI +LTK GK+ TA K++R+M E  C PDVVICNCIID+LCFK R+P+ALE+F+EM ++G
Sbjct: 259  FIKALTKKGKLGTALKIYRAMWEKQCKPDVVICNCIIDALCFKNRVPEALEVFREMSQQG 318

Query: 860  CPPNVATYNSLIKHLCKIVRXXXXXXXXXXXXXXKGSCTPNEITFICLLKAAKKPDEVRG 681
            C PN ATYNSLIKH  +I R              KGSC P+ ITF  LLKA KKP+E+  
Sbjct: 319  CLPNGATYNSLIKHFSRIRRMEKVYELLDEMLDKKGSCMPDHITFNYLLKALKKPEELPL 378

Query: 680  VLERMKRNDCRVAGDTYNMMLKLFLDWNDVQGVQSVWTEMEKNGVGPDQRSYTIMIHRLH 501
            VLERM+RN C ++ DTYN++L+L+ DW+  + V   W EMEK G+GPD+RSYTIMIH L+
Sbjct: 379  VLERMERNGCMISTDTYNLILRLYADWDCEERVGDTWNEMEKLGLGPDRRSYTIMIHWLY 438

Query: 500  KKGRVEEALKCFKEMMSKGMIQELRTDLLVTNMKTKLNERKHQHGGCE-IGEVR--GSAK 330
            +KGR+ +AL  F EM SKGM+ E RT++LV++M  KL +   + G  + I  V+  GS  
Sbjct: 439  EKGRINDALHYFGEMTSKGMVSEPRTEMLVSSMNMKLKDNDAEQGEKDAINGVKSLGSMH 498

Query: 329  QRKKNI 312
            +R++ I
Sbjct: 499  KRRREI 504