BLASTX nr result

ID: Coptis23_contig00013112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013112
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002454155.1| hypothetical protein SORBIDRAFT_04g025630 [S...    97   2e-18
ref|NP_001148375.1| LOC100281987 [Zea mays] gi|195618714|gb|ACG3...    97   2e-18
dbj|BAJ94383.1| predicted protein [Hordeum vulgare subsp. vulgare]     94   2e-17
ref|XP_003565162.1| PREDICTED: uncharacterized protein LOC100835...    93   3e-17
ref|XP_003553857.1| PREDICTED: uncharacterized protein LOC100795...    91   1e-16

>ref|XP_002454155.1| hypothetical protein SORBIDRAFT_04g025630 [Sorghum bicolor]
           gi|241933986|gb|EES07131.1| hypothetical protein
           SORBIDRAFT_04g025630 [Sorghum bicolor]
          Length = 452

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 42/56 (75%), Positives = 52/56 (92%)
 Frame = +1

Query: 343 NPKIELVPRATFKLLSKLVFALFMPCLIFTHLGKNMTLHNFMHSWFIPVNVLVSTA 510
           NP++++VPRATFKLLSKLVFALF+PCLIF HLGK++T+ N +H WFIPVNVL+STA
Sbjct: 37  NPRVQVVPRATFKLLSKLVFALFLPCLIFVHLGKSVTIDNVLHWWFIPVNVLISTA 92


>ref|NP_001148375.1| LOC100281987 [Zea mays] gi|195618714|gb|ACG31187.1| auxin Efflux
           Carrier family protein [Zea mays]
           gi|219887913|gb|ACL54331.1| unknown [Zea mays]
           gi|413922971|gb|AFW62903.1| Auxin Efflux Carrier family
           isoform 1 [Zea mays] gi|413922972|gb|AFW62904.1| Auxin
           Efflux Carrier family isoform 2 [Zea mays]
          Length = 451

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 42/56 (75%), Positives = 52/56 (92%)
 Frame = +1

Query: 343 NPKIELVPRATFKLLSKLVFALFMPCLIFTHLGKNMTLHNFMHSWFIPVNVLVSTA 510
           NP++++VPRATFKLLSKLVFALF+PCLIF HLGK++T+ N +H WFIPVNVL+STA
Sbjct: 37  NPRVQVVPRATFKLLSKLVFALFLPCLIFVHLGKSVTIDNVLHWWFIPVNVLISTA 92


>dbj|BAJ94383.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 453

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 40/56 (71%), Positives = 52/56 (92%)
 Frame = +1

Query: 343 NPKIELVPRATFKLLSKLVFALFMPCLIFTHLGKNMTLHNFMHSWFIPVNVLVSTA 510
           +P+ ++VP+ATFKLLSKLVFALF+PCLIF HLG+++TLHN +H WFIPVNVL++TA
Sbjct: 34  HPRAQVVPKATFKLLSKLVFALFLPCLIFVHLGQSVTLHNVLHWWFIPVNVLIATA 89


>ref|XP_003565162.1| PREDICTED: uncharacterized protein LOC100835005 isoform 1
           [Brachypodium distachyon]
           gi|357126976|ref|XP_003565163.1| PREDICTED:
           uncharacterized protein LOC100835005 isoform 2
           [Brachypodium distachyon]
          Length = 452

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 40/56 (71%), Positives = 51/56 (91%)
 Frame = +1

Query: 343 NPKIELVPRATFKLLSKLVFALFMPCLIFTHLGKNMTLHNFMHSWFIPVNVLVSTA 510
           NP+ ++VP+ATFKLLSKLVFALF+PCLIF HLG+++T+ N +H WFIPVNVL+STA
Sbjct: 37  NPRTQIVPKATFKLLSKLVFALFLPCLIFVHLGQSVTIDNVLHWWFIPVNVLISTA 92


>ref|XP_003553857.1| PREDICTED: uncharacterized protein LOC100795484 [Glycine max]
          Length = 445

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/56 (73%), Positives = 50/56 (89%)
 Frame = +1

Query: 343 NPKIELVPRATFKLLSKLVFALFMPCLIFTHLGKNMTLHNFMHSWFIPVNVLVSTA 510
           NP ++ +P+ATFKLLSKLVFALF+PCLIFT LG+++TL NF+  WFIPVNVLVSTA
Sbjct: 35  NPTMQFIPKATFKLLSKLVFALFLPCLIFTELGESITLENFVDWWFIPVNVLVSTA 90


Top