BLASTX nr result

ID: Coptis23_contig00013111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013111
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL91622.1| At2g23450/F26B6.10 [Arabidopsis thaliana] gi|2346...    61   1e-07
ref|NP_565552.1| wall-associated receptor kinase-like 14 [Arabid...    61   1e-07
ref|XP_002880505.1| kinase family protein [Arabidopsis lyrata su...    60   1e-07
ref|XP_003519915.1| PREDICTED: wall-associated receptor kinase-l...    59   3e-07
ref|XP_003548009.1| PREDICTED: wall-associated receptor kinase-l...    57   2e-06

>gb|AAL91622.1| At2g23450/F26B6.10 [Arabidopsis thaliana]
           gi|23463045|gb|AAN33192.1| At2g23450/F26B6.10
           [Arabidopsis thaliana]
          Length = 708

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 15/89 (16%)
 Frame = +3

Query: 60  SSSVLNRSGFVTLGNVNRSGCNLLFSSVAYDELXXXXXIAFEFQSVNLGWWLEGNCK--- 230
           +SS  N + F ++  +  S C+LLFSS+A++ +     IA EF+ V LGWWL+G C+   
Sbjct: 167 NSSSKNSAKFFSMKTLRNSSCSLLFSSIAFESVGVNAGIALEFERVRLGWWLKGGCESGT 226

Query: 231 ------CSDHAKPIVHGFVG------DGF 281
                 C+D   P  HG+ G      DGF
Sbjct: 227 CAANTDCTDVETP--HGYAGHRCSCLDGF 253


>ref|NP_565552.1| wall-associated receptor kinase-like 14 [Arabidopsis thaliana]
           gi|30682087|ref|NP_850041.1| wall-associated receptor
           kinase-like 14 [Arabidopsis thaliana]
           gi|116256124|sp|Q8RY67.2|WAKLO_ARATH RecName:
           Full=Wall-associated receptor kinase-like 14; Flags:
           Precursor gi|20197000|gb|AAC23760.2| putative protein
           kinase [Arabidopsis thaliana]
           gi|330252362|gb|AEC07456.1| wall-associated receptor
           kinase-like 14 [Arabidopsis thaliana]
           gi|330252363|gb|AEC07457.1| wall-associated receptor
           kinase-like 14 [Arabidopsis thaliana]
          Length = 708

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 15/89 (16%)
 Frame = +3

Query: 60  SSSVLNRSGFVTLGNVNRSGCNLLFSSVAYDELXXXXXIAFEFQSVNLGWWLEGNCK--- 230
           +SS  N + F ++  +  S C+LLFSS+A++ +     IA EF+ V LGWWL+G C+   
Sbjct: 167 NSSSKNSAKFFSMKTLRNSSCSLLFSSIAFESVGVNAGIALEFERVRLGWWLKGGCESGT 226

Query: 231 ------CSDHAKPIVHGFVG------DGF 281
                 C+D   P  HG+ G      DGF
Sbjct: 227 CAANTDCTDVETP--HGYAGHRCSCLDGF 253


>ref|XP_002880505.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326344|gb|EFH56764.1| kinase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 705

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 18/93 (19%)
 Frame = +3

Query: 60  SSSVLNRSGFVTLGNVNRSGCNLLFSSVAYDELXXXXXIAFEFQSVNLGWWLEGNCK--- 230
           +SS  N + F ++  +  S C+LLFSS+A++       IA EF+ V LGWWL+G+CK   
Sbjct: 164 NSSSKNSAKFFSMKELRNSSCSLLFSSIAFESGGLNAGIALEFERVRLGWWLKGSCKNSP 223

Query: 231 ------CSDHAKP---------IVHGFVGDGFV 284
                 C+D   P          + G+ GDGF+
Sbjct: 224 CAVNTNCTDVDTPHGYAGYRCSCLAGYHGDGFI 256


>ref|XP_003519915.1| PREDICTED: wall-associated receptor kinase-like 14-like [Glycine
           max]
          Length = 699

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 15/95 (15%)
 Frame = +3

Query: 42  NNYNRHSSSVLNRSGFVTLGNVNRSGCNLLFSSVAYDELXXXXXIAFEFQSVNLGWWLEG 221
           +N +R    VL R  +       R GC  LFS++A+D       ++ +FQ V LGWWLEG
Sbjct: 149 SNGSREDDDVLMRLDW------ERVGCKFLFSALAFDR-SKVKELSLQFQMVELGWWLEG 201

Query: 222 NCKCSDHAK--PIVH-------------GFVGDGF 281
           NC CS++A    + H             GFVGDGF
Sbjct: 202 NCSCSNNASCTEVNHGGGKLGFRCRCDEGFVGDGF 236


>ref|XP_003548009.1| PREDICTED: wall-associated receptor kinase-like 14-like [Glycine
           max]
          Length = 716

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 15/79 (18%)
 Frame = +3

Query: 90  VTLGNVNRSGCNLLFSSVAYDELXXXXXIAFEFQSVNLGWWLEGNCKCSDHAK------- 248
           +T  +  R GC  LFS++A+D       ++ +FQ V LGWWL+GNC CS++A        
Sbjct: 176 LTHSDWERVGCRFLFSALAFDR-SKVKELSLQFQMVELGWWLQGNCSCSNNASCTEVNTD 234

Query: 249 --------PIVHGFVGDGF 281
                       GF+GDGF
Sbjct: 235 GGKRGFRCRCDEGFIGDGF 253


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