BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013104
         (1105 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274008.1| PREDICTED: mitochondrial ubiquitin ligase ac...   424   e-116
ref|XP_003536411.1| PREDICTED: mitochondrial ubiquitin ligase ac...   407   e-111
ref|XP_003518933.1| PREDICTED: mitochondrial ubiquitin ligase ac...   407   e-111
ref|XP_002887932.1| zinc finger family protein [Arabidopsis lyra...   397   e-108
gb|EEC82565.1| hypothetical protein OsI_27112 [Oryza sativa Indi...   395   e-108

>ref|XP_002274008.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1
           [Vitis vinifera] gi|296086688|emb|CBI32323.3| unnamed
           protein product [Vitis vinifera]
          Length = 343

 Score =  424 bits (1091), Expect = e-116
 Identities = 205/249 (82%), Positives = 230/249 (92%), Gaps = 1/249 (0%)
 Frame = -1

Query: 817 MFPWGGITCCLSAAALYLLGRSSGKDADILKSVYRIGQLKDLAKILDTACKVLPLVVTVS 638
           M PWGGI+CCLSAAALYLLGRSSG+DA+ LKSV R+ QLKDL ++LDTACKVLPLVVTVS
Sbjct: 1   MIPWGGISCCLSAAALYLLGRSSGRDAEALKSVTRVQQLKDLVQLLDTACKVLPLVVTVS 60

Query: 637 GRVGSDAPIKCD-SGLRGVIVEETAEQHFLKHNDSGSWVEDSALMLAMSKEVPWYLDDGT 461
           GRVGSD PIKC+ SGLRGVIVEETAEQHFLKHND+GSW++DSALML+MSKEVPWYLDD T
Sbjct: 61  GRVGSDTPIKCEYSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDDT 120

Query: 460 GRVHVVGARGANGLVLAIGREIFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPIGTSLT 281
           GR ++VGARGA GLVL +G E+FEESGRSLVRGTLDYLQGLKMLGVKRIERVLP GT LT
Sbjct: 121 GRAYIVGARGATGLVLTVGSEVFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPTGTPLT 180

Query: 280 VVGEAVKDDIGTIRIQRPHKGPFYVSPKSIDQLIANLGIWSRFYKYASMGFTVVGVFLIA 101
           VVGEA+KDD+GTIRIQRPHKGPFYVSPKSID L+ANLG W+R+Y+YAS+GFTV GV+LIA
Sbjct: 181 VVGEAIKDDVGTIRIQRPHKGPFYVSPKSIDHLVANLGKWARWYRYASLGFTVFGVYLIA 240

Query: 100 KHTIRYIME 74
           K  I+Y+ME
Sbjct: 241 KSAIQYVME 249


>ref|XP_003536411.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like
           isoform 1 [Glycine max]
          Length = 339

 Score =  407 bits (1047), Expect = e-111
 Identities = 198/249 (79%), Positives = 226/249 (90%), Gaps = 1/249 (0%)
 Frame = -1

Query: 817 MFPWGGITCCLSAAALYLLGRSSGKDADILKSVYRIGQLKDLAKILDTACKVLPLVVTVS 638
           M PWGG++CCLSAAALYLLGRSSG+DA+ILKSV R+ QLK+LA++LD   ++LPL+VT+S
Sbjct: 1   MIPWGGLSCCLSAAALYLLGRSSGRDAEILKSVTRVNQLKELAQLLDA--EILPLIVTIS 58

Query: 637 GRVGSDAPIKCD-SGLRGVIVEETAEQHFLKHNDSGSWVEDSALMLAMSKEVPWYLDDGT 461
           GRV S+ PI C+ SGLRGVIVEETAEQHFLKHND+GSW++DSALML+MSKEVPWYLDDGT
Sbjct: 59  GRVSSETPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGT 118

Query: 460 GRVHVVGARGANGLVLAIGREIFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPIGTSLT 281
            RVHVVGARGA+G  L +G E FEESGRSLVRGTLDYLQGLKMLGVKRIERVLP+GTSLT
Sbjct: 119 DRVHVVGARGASGFALPVGIEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPVGTSLT 178

Query: 280 VVGEAVKDDIGTIRIQRPHKGPFYVSPKSIDQLIANLGIWSRFYKYASMGFTVVGVFLIA 101
           VVGEA KDD+G IRIQRPHKGPFYVSPK+IDQLIANLG W+R+YKYAS+G TV G +LIA
Sbjct: 179 VVGEAAKDDVGAIRIQRPHKGPFYVSPKTIDQLIANLGKWARWYKYASVGLTVFGAYLIA 238

Query: 100 KHTIRYIME 74
           KH IRYI+E
Sbjct: 239 KHAIRYILE 247


>ref|XP_003518933.1| PREDICTED: mitochondrial ubiquitin ligase activator of NFKB 1-like
           [Glycine max]
          Length = 339

 Score =  407 bits (1046), Expect = e-111
 Identities = 198/249 (79%), Positives = 224/249 (89%), Gaps = 1/249 (0%)
 Frame = -1

Query: 817 MFPWGGITCCLSAAALYLLGRSSGKDADILKSVYRIGQLKDLAKILDTACKVLPLVVTVS 638
           M PWGG++CCLSAAALYLLGRSSG+DA+ILKSV R+ QLK+LA++LD   ++LPL+VT+S
Sbjct: 1   MIPWGGLSCCLSAAALYLLGRSSGRDAEILKSVTRVNQLKELAQLLDA--EILPLIVTIS 58

Query: 637 GRVGSDAPIKCD-SGLRGVIVEETAEQHFLKHNDSGSWVEDSALMLAMSKEVPWYLDDGT 461
           GRV S+ PI C+ SGLRGVIVEETAEQHFLKHND+GSW++DSALML+MSKEVPWYLDDGT
Sbjct: 59  GRVSSETPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGT 118

Query: 460 GRVHVVGARGANGLVLAIGREIFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPIGTSLT 281
            RVHVVGARGA G  L +G E FEESGRSLVRGTLDYLQGLKMLGVKRIERVLP+GTSLT
Sbjct: 119 DRVHVVGARGAAGFALPVGSEAFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPVGTSLT 178

Query: 280 VVGEAVKDDIGTIRIQRPHKGPFYVSPKSIDQLIANLGIWSRFYKYASMGFTVVGVFLIA 101
           VVGEA KDD+G  RIQRPHKGPFYVSPK+IDQLIANLG W+R+YKYASMG TV G +LIA
Sbjct: 179 VVGEAAKDDVGAFRIQRPHKGPFYVSPKTIDQLIANLGKWARWYKYASMGLTVFGAYLIA 238

Query: 100 KHTIRYIME 74
           KH IRYI+E
Sbjct: 239 KHAIRYILE 247


>ref|XP_002887932.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333773|gb|EFH64191.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 343

 Score =  397 bits (1021), Expect = e-108
 Identities = 190/249 (76%), Positives = 221/249 (88%), Gaps = 1/249 (0%)
 Frame = -1

Query: 817 MFPWGGITCCLSAAALYLLGRSSGKDADILKSVYRIGQLKDLAKILDTACKVLPLVVTVS 638
           M PWGG+TCCLSAAALYLLGRSSG+DA++LK+V R+ QLK+LA++L+   K+LP +V VS
Sbjct: 1   MIPWGGVTCCLSAAALYLLGRSSGRDAEVLKTVTRVNQLKELAQLLELDSKILPFIVAVS 60

Query: 637 GRVGSDAPIKCD-SGLRGVIVEETAEQHFLKHNDSGSWVEDSALMLAMSKEVPWYLDDGT 461
           GRVGS+ PIKC+ SG+RGVIVEETAEQHFLKHN++GSWV+DSALML+MSKEVPW+LDDGT
Sbjct: 61  GRVGSETPIKCEHSGIRGVIVEETAEQHFLKHNETGSWVQDSALMLSMSKEVPWFLDDGT 120

Query: 460 GRVHVVGARGANGLVLAIGREIFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPIGTSLT 281
            RVHV+GARGA G  L +G E+FEESGRSLVRGTLDYLQGLKMLGVKRIERVLP G  LT
Sbjct: 121 SRVHVMGARGATGFALTVGSEVFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPTGIPLT 180

Query: 280 VVGEAVKDDIGTIRIQRPHKGPFYVSPKSIDQLIANLGIWSRFYKYASMGFTVVGVFLIA 101
           +VGEAVKDDIG  RIQ+P +GPFYVSPKS+DQLI+NLG WSR+YKYASMGFTV GVFLI 
Sbjct: 181 IVGEAVKDDIGEFRIQKPDRGPFYVSPKSLDQLISNLGKWSRWYKYASMGFTVFGVFLIT 240

Query: 100 KHTIRYIME 74
           KH I  ++E
Sbjct: 241 KHVIDSVLE 249


>gb|EEC82565.1| hypothetical protein OsI_27112 [Oryza sativa Indica Group]
           gi|222637570|gb|EEE67702.1| hypothetical protein
           OsJ_25368 [Oryza sativa Japonica Group]
          Length = 343

 Score =  395 bits (1016), Expect = e-108
 Identities = 192/249 (77%), Positives = 219/249 (87%), Gaps = 1/249 (0%)
 Frame = -1

Query: 817 MFPWGGITCCLSAAALYLLGRSSGKDADILKSVYRIGQLKDLAKILDTACKVLPLVVTVS 638
           + PWGG+ CCLSAAALYLLGRSSG+DA++L+SV R G  KDLA ILDTA KVLPLVV VS
Sbjct: 2   LIPWGGVGCCLSAAALYLLGRSSGRDAEVLRSVARAGSTKDLAAILDTASKVLPLVVAVS 61

Query: 637 GRVGSDAPIKCD-SGLRGVIVEETAEQHFLKHNDSGSWVEDSALMLAMSKEVPWYLDDGT 461
           GRVGSD P+ C  SG+RGVIVEETAEQHFLKHND+GSW++DSA+ML++SKEVPWYLDDGT
Sbjct: 62  GRVGSDTPLICQQSGMRGVIVEETAEQHFLKHNDAGSWIQDSAVMLSVSKEVPWYLDDGT 121

Query: 460 GRVHVVGARGANGLVLAIGREIFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPIGTSLT 281
           GRV VVGARGA GLVL +  E+FEESGR+LVRGTLDYLQGLKMLGVKR ERVLP GTSLT
Sbjct: 122 GRVFVVGARGAAGLVLTVASEVFEESGRTLVRGTLDYLQGLKMLGVKRTERVLPTGTSLT 181

Query: 280 VVGEAVKDDIGTIRIQRPHKGPFYVSPKSIDQLIANLGIWSRFYKYASMGFTVVGVFLIA 101
           VVGEA+KDD+GTIRIQRPHKGPFYVSPKSIDQLI NLG W++ Y+ ASMGF   GVFL+A
Sbjct: 182 VVGEAIKDDVGTIRIQRPHKGPFYVSPKSIDQLIMNLGKWAKLYQLASMGFAAFGVFLLA 241

Query: 100 KHTIRYIME 74
           K  +++ +E
Sbjct: 242 KRALQHFLE 250