BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013103
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518418.1| 26S protease regulatory subunit, putative [R...    78   8e-13
ref|XP_002331561.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
gb|AAO42237.1| putative vesicle transfer ATPase [Arabidopsis tha...    75   5e-12
ref|NP_192327.3| AAA-type ATPase family protein [Arabidopsis tha...    75   5e-12
gb|AAC28233.1| contains similarity to ATPases associated with va...    75   5e-12

>ref|XP_002518418.1| 26S protease regulatory subunit, putative [Ricinus communis]
           gi|223542263|gb|EEF43805.1| 26S protease regulatory
           subunit, putative [Ricinus communis]
          Length = 587

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 38/47 (80%), Positives = 42/47 (89%)
 Frame = +1

Query: 250 DQEWCEIEDTILLALHSRKVYDDIARGTWRKFESNRPRAILFEGPSG 390
           DQ+  EIEDTILLALHS +VYD+IARGT RKFESNRPRA+LFEGP G
Sbjct: 311 DQQKQEIEDTILLALHSPEVYDNIARGTRRKFESNRPRAVLFEGPPG 357


>ref|XP_002331561.1| predicted protein [Populus trichocarpa] gi|222873785|gb|EEF10916.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 38/47 (80%), Positives = 41/47 (87%)
 Frame = +1

Query: 250 DQEWCEIEDTILLALHSRKVYDDIARGTWRKFESNRPRAILFEGPSG 390
           DQ+  EIEDTILLAL S +VYDDIARGT RKFESNRPRA+LFEGP G
Sbjct: 288 DQQKREIEDTILLALQSPEVYDDIARGTRRKFESNRPRAVLFEGPPG 334


>gb|AAO42237.1| putative vesicle transfer ATPase [Arabidopsis thaliana]
          Length = 180

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 36/47 (76%), Positives = 40/47 (85%)
 Frame = +1

Query: 250 DQEWCEIEDTILLALHSRKVYDDIARGTWRKFESNRPRAILFEGPSG 390
           DQ+  EIEDTIL+ALHS +VYDDI RGT  KFESNRPRA+LFEGP G
Sbjct: 134 DQQKREIEDTILMALHSPEVYDDIVRGTRSKFESNRPRAVLFEGPPG 180


>ref|NP_192327.3| AAA-type ATPase family protein [Arabidopsis thaliana]
           gi|332656970|gb|AEE82370.1| AAA-type ATPase family
           protein [Arabidopsis thaliana]
          Length = 609

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 36/47 (76%), Positives = 40/47 (85%)
 Frame = +1

Query: 250 DQEWCEIEDTILLALHSRKVYDDIARGTWRKFESNRPRAILFEGPSG 390
           DQ+  EIEDTIL+ALHS +VYDDI RGT  KFESNRPRA+LFEGP G
Sbjct: 325 DQQKREIEDTILMALHSPEVYDDIVRGTRSKFESNRPRAVLFEGPPG 371


>gb|AAC28233.1| contains similarity to ATPases associated with various cellular
           activities (Pfam: AAA.hmm, score: 155.05) [Arabidopsis
           thaliana] gi|7267174|emb|CAB77886.1| putative vesicle
           transfer ATPase [Arabidopsis thaliana]
          Length = 536

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 36/47 (76%), Positives = 40/47 (85%)
 Frame = +1

Query: 250 DQEWCEIEDTILLALHSRKVYDDIARGTWRKFESNRPRAILFEGPSG 390
           DQ+  EIEDTIL+ALHS +VYDDI RGT  KFESNRPRA+LFEGP G
Sbjct: 252 DQQKREIEDTILMALHSPEVYDDIVRGTRSKFESNRPRAVLFEGPPG 298