BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013100
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588284.1| hypothetical protein MTR_1g005250 [Medicago ...   132   8e-53
ref|XP_003628497.1| NADH dehydrogenase subunit F [Medicago trunc...   116   3e-24
ref|XP_002518611.1| conserved hypothetical protein [Ricinus comm...    75   1e-16
emb|CAN61461.1| hypothetical protein VITISV_029800 [Vitis vinifera]    81   2e-13
ref|XP_002523276.1| conserved hypothetical protein [Ricinus comm...    59   9e-07

>ref|XP_003588284.1| hypothetical protein MTR_1g005250 [Medicago truncatula]
           gi|355477332|gb|AES58535.1| hypothetical protein
           MTR_1g005250 [Medicago truncatula]
          Length = 197

 Score =  132 bits (332), Expect(2) = 8e-53
 Identities = 67/81 (82%), Positives = 68/81 (83%)
 Frame = -3

Query: 281 YCSMEAGGLLEVRPGFSGVVGEGFTFLTHILSYRHGPIDFFSIGASSSATRFYLTKPRAR 102
           Y SMEAGGLLEVRPGF GVVGEG TFLTHI SYRHGP D FSIGASSSATRFYLTKPRAR
Sbjct: 111 YFSMEAGGLLEVRPGFFGVVGEGLTFLTHIHSYRHGPTDLFSIGASSSATRFYLTKPRAR 170

Query: 101 PRREFALPNSPF**QGRKP*P 39
           PRREFALPNS F  +   P P
Sbjct: 171 PRREFALPNSLFDNKAETPDP 191



 Score =  100 bits (250), Expect(2) = 8e-53
 Identities = 57/83 (68%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
 Frame = -2

Query: 552 GSLISKPPVLVRSGPWSSVSGLLADKISEIDQPAGLVWLFLSIE-KESAVCASHLLLGSA 376
           GSLIS PPVL+RSGPWSSVSGL ADKISEIDQPAGLVWLFLSIE KESAVC         
Sbjct: 37  GSLISTPPVLIRSGPWSSVSGLPADKISEIDQPAGLVWLFLSIEKKESAVC--------- 87

Query: 375 GRHGILVQI*AGRTCDGSQGSNM 307
                     AGRTCDGS  SN+
Sbjct: 88  ----------AGRTCDGSPRSNI 100



 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 40/99 (40%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
 Frame = -1

Query: 310 YDHLGLRCHDIVLWKRAGC*KFGPVFLVS*GRDLLF*RIF--CRTGMAPLISFRSEHQAA 137
           YDHLGLRCHD    +  G  +  P F    G  L F       R G   L S  +   A 
Sbjct: 101 YDHLGLRCHDYFSMEAGGLLEVRPGFFGVVGEGLTFLTHIHSYRHGPTDLFSIGASSSAT 160

Query: 136 QPGST*LSPVLVQGGSLLYPTPLFDNKAESPDPTFISFE 20
           +   T   P          P  LFDNKAE+PDPTFISFE
Sbjct: 161 RFYLT--KPRARPRREFALPNSLFDNKAETPDPTFISFE 197


>ref|XP_003628497.1| NADH dehydrogenase subunit F [Medicago truncatula]
           gi|355522519|gb|AET02973.1| NADH dehydrogenase subunit F
           [Medicago truncatula]
          Length = 187

 Score =  116 bits (291), Expect = 3e-24
 Identities = 60/70 (85%), Positives = 62/70 (88%), Gaps = 1/70 (1%)
 Frame = -2

Query: 564 VGRGGSLISKPPVLVRSGPWSSVSGLLADKISEIDQPAGLVWLFLSIE-KESAVCASHLL 388
           V R GSLIS PPVL+RSGPWSSVSG  ADKISEIDQPAGLVWLFLSIE KESAVCASHLL
Sbjct: 15  VSRVGSLISTPPVLIRSGPWSSVSGFPADKISEIDQPAGLVWLFLSIEKKESAVCASHLL 74

Query: 387 LGSAGRHGIL 358
           LGSAGRH  +
Sbjct: 75  LGSAGRHAFV 84


>ref|XP_002518611.1| conserved hypothetical protein [Ricinus communis]
           gi|223542210|gb|EEF43753.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 60

 Score = 74.7 bits (182), Expect(2) = 1e-16
 Identities = 35/44 (79%), Positives = 36/44 (81%)
 Frame = -3

Query: 197 HILSYRHGPIDFFSIGASSSATRFYLTKPRARPRREFALPNSPF 66
           HI SYRH P D FSIGASSS T+FYLTKP A PRREFALPNS F
Sbjct: 2   HIQSYRHSPTDLFSIGASSSTTQFYLTKPHAHPRREFALPNSLF 45



 Score = 37.4 bits (85), Expect(2) = 1e-16
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = -1

Query: 79  PTPLFDNKAESPDPTFISFE 20
           P  LFDNKAE+PD TFISFE
Sbjct: 41  PNSLFDNKAETPDQTFISFE 60


>emb|CAN61461.1| hypothetical protein VITISV_029800 [Vitis vinifera]
          Length = 124

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 40/51 (78%), Positives = 41/51 (80%)
 Frame = -3

Query: 191 LSYRHGPIDFFSIGASSSATRFYLTKPRARPRREFALPNSPF**QGRKP*P 39
           LSYRHGP D FSIGASSSATRFYLTKPRARPRREFALPN  F  +   P P
Sbjct: 68  LSYRHGPTDLFSIGASSSATRFYLTKPRARPRREFALPNPLFDNKAESPDP 118



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/30 (93%), Positives = 28/30 (93%)
 Frame = -2

Query: 534 PPVLVRSGPWSSVSGLLADKISEIDQPAGL 445
           PPVLVRSG WSSVSGL ADKISEIDQPAGL
Sbjct: 39  PPVLVRSGLWSSVSGLPADKISEIDQPAGL 68


>ref|XP_002523276.1| conserved hypothetical protein [Ricinus communis]
           gi|223537489|gb|EEF39115.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 136

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/53 (60%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
 Frame = +2

Query: 416 SFSIERNSQTNPAGWSISEILSASKPETDDHGPDLTSTGGLLINE---PPLPT 565
           SF  ERNSQT P  WSIS+ILS  K ETD+ GPDLTST G+   E    P PT
Sbjct: 84  SFEAERNSQTKPVVWSISKILSIGKLETDNQGPDLTSTRGVHKEEHVGMPTPT 136