BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013080
         (1248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana] g...   394   e-107
ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis...   392   e-107
ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arab...   392   e-106
ref|XP_003607539.1| GTP-binding protein ras-like protein [Medica...   389   e-105
ref|XP_002525153.1| protein with unknown function [Ricinus commu...   388   e-105

>ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
            gi|75171043|sp|Q9FJH0.1|RAA1F_ARATH RecName:
            Full=Ras-related protein RABA1f; Short=AtRABA1f
            gi|10176913|dbj|BAB10106.1| GTP-binding protein, ras-like
            [Arabidopsis thaliana] gi|26452359|dbj|BAC43265.1|
            putative GTP-binding protein [Arabidopsis thaliana]
            gi|28950757|gb|AAO63302.1| At5g60860 [Arabidopsis
            thaliana] gi|332010004|gb|AED97387.1| RAB GTPase homolog
            A1F [Arabidopsis thaliana]
          Length = 217

 Score =  394 bits (1012), Expect = e-107
 Identities = 199/204 (97%), Positives = 203/204 (99%)
 Frame = -1

Query: 1089 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 910
            LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK+VKAQIWDTAGQ
Sbjct: 13   LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQ 72

Query: 909  ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRH 730
            ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM VGNKADLRH
Sbjct: 73   ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKADLRH 132

Query: 729  LRAVSTEDAKSFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGDDPAAL 550
            LRAVSTEDAK+FAERENTFFMETSALESMNVENAFTEVL+QIYRVVSRKALDIGDDPAAL
Sbjct: 133  LRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDPAAL 192

Query: 549  PKGQTINVGNKDDVSAVKKVGCCS 478
            PKGQTINVG+KDDVSAVKKVGCCS
Sbjct: 193  PKGQTINVGSKDDVSAVKKVGCCS 216


>ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis vinifera]
          Length = 217

 Score =  392 bits (1008), Expect = e-107
 Identities = 200/205 (97%), Positives = 202/205 (98%)
 Frame = -1

Query: 1089 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 910
            LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSI VDDKVVKAQIWDTAGQ
Sbjct: 13   LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQ 72

Query: 909  ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRH 730
            ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIVIMLVGNKADLRH
Sbjct: 73   ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 132

Query: 729  LRAVSTEDAKSFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGDDPAAL 550
            LRAVSTEDAK+FAEREN FFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGDDPAAL
Sbjct: 133  LRAVSTEDAKAFAERENNFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGDDPAAL 192

Query: 549  PKGQTINVGNKDDVSAVKKVGCCSA 475
            PKGQTINVG KDDVSAVKKVGCCSA
Sbjct: 193  PKGQTINVGTKDDVSAVKKVGCCSA 217


>ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
            lyrata] gi|297310544|gb|EFH40968.1| hypothetical protein
            ARALYDRAFT_919325 [Arabidopsis lyrata subsp. lyrata]
          Length = 217

 Score =  392 bits (1006), Expect = e-106
 Identities = 197/204 (96%), Positives = 203/204 (99%)
 Frame = -1

Query: 1089 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 910
            LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK+VKAQIWDTAGQ
Sbjct: 13   LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQ 72

Query: 909  ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRH 730
            ERYRAITSAYYRGAVGALLVYDVTRHVTFEN+ERWLKELRDHTD+NIVIM VGNKADLRH
Sbjct: 73   ERYRAITSAYYRGAVGALLVYDVTRHVTFENLERWLKELRDHTDSNIVIMFVGNKADLRH 132

Query: 729  LRAVSTEDAKSFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGDDPAAL 550
            LRAVSTEDAK+FAERENTFFMETSALESMNVENAFTEVL+QIYRVVSRKALDIGDDPAAL
Sbjct: 133  LRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDPAAL 192

Query: 549  PKGQTINVGNKDDVSAVKKVGCCS 478
            PKGQTINVG+KDDVSAVKKVGCCS
Sbjct: 193  PKGQTINVGSKDDVSAVKKVGCCS 216


>ref|XP_003607539.1| GTP-binding protein ras-like protein [Medicago truncatula]
            gi|355508594|gb|AES89736.1| GTP-binding protein ras-like
            protein [Medicago truncatula]
          Length = 217

 Score =  389 bits (998), Expect = e-105
 Identities = 194/205 (94%), Positives = 204/205 (99%)
 Frame = -1

Query: 1089 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 910
            LFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSIHVDDK+VKAQIWDTAGQ
Sbjct: 13   LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQ 72

Query: 909  ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRH 730
            ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRH
Sbjct: 73   ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRH 132

Query: 729  LRAVSTEDAKSFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGDDPAAL 550
            LRAVST+DAK+FAERENTFFMETSALES+NV+N+FTEVLTQIYRVVSRK L+IGDDPAAL
Sbjct: 133  LRAVSTDDAKAFAERENTFFMETSALESLNVDNSFTEVLTQIYRVVSRKTLEIGDDPAAL 192

Query: 549  PKGQTINVGNKDDVSAVKKVGCCSA 475
            PKGQTINVG++DDVSAVKKVGCCSA
Sbjct: 193  PKGQTINVGSRDDVSAVKKVGCCSA 217


>ref|XP_002525153.1| protein with unknown function [Ricinus communis]
            gi|223535612|gb|EEF37280.1| protein with unknown function
            [Ricinus communis]
          Length = 216

 Score =  388 bits (997), Expect = e-105
 Identities = 198/205 (96%), Positives = 204/205 (99%)
 Frame = -1

Query: 1089 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 910
            LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ
Sbjct: 13   LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 72

Query: 909  ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRH 730
            ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTD+NIVIMLVGNKADLRH
Sbjct: 73   ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRH 132

Query: 729  LRAVSTEDAKSFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGDDPAAL 550
            LRAV+TEDAK+FAERE+TFFMETSALES+NVENAFTEVLTQIYRVVSRKALD+GDDPAAL
Sbjct: 133  LRAVTTEDAKAFAERESTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAAL 192

Query: 549  PKGQTINVGNKDDVSAVKKVGCCSA 475
            PKGQTINVG KDDVSAVKKVGCCSA
Sbjct: 193  PKGQTINVG-KDDVSAVKKVGCCSA 216