BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013058
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624562.1| INO80 complex subunit D [Medicago truncatula...    84   2e-14
ref|XP_002529751.1| conserved hypothetical protein [Ricinus comm...    80   1e-13
ref|XP_002310446.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002327853.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002263103.2| PREDICTED: INO80 complex subunit D-like [Vit...    80   2e-13

>ref|XP_003624562.1| INO80 complex subunit D [Medicago truncatula]
           gi|355499577|gb|AES80780.1| INO80 complex subunit D
           [Medicago truncatula]
          Length = 233

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 36/67 (53%), Positives = 49/67 (73%)
 Frame = -3

Query: 273 PFTLDELEEDLILSKSEYLTRQEVIRRRYRRLKLEIKVYEDYYWALMEDYRVKHREYYWN 94
           P T+D  +EDL L+ S  LTR+EV+ RR RR++   + Y  +YWALME+ + K+REYYW 
Sbjct: 14  PMTIDGADEDLALAASSVLTRREVLVRRLRRVRQLSRCYRGHYWALMEELKAKYREYYWT 73

Query: 93  YGKSPFK 73
           YG+SPFK
Sbjct: 74  YGRSPFK 80


>ref|XP_002529751.1| conserved hypothetical protein [Ricinus communis]
           gi|223530749|gb|EEF32617.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 314

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 35/60 (58%), Positives = 46/60 (76%)
 Frame = -3

Query: 252 EEDLILSKSEYLTRQEVIRRRYRRLKLEIKVYEDYYWALMEDYRVKHREYYWNYGKSPFK 73
           ++D  LS++ +LTRQE+++RR   LK   K Y DYYWALMED +V++REYYW YG SPFK
Sbjct: 63  QQDQYLSRATHLTRQELLKRRAFNLKQLSKCYRDYYWALMEDLKVQYREYYWKYGVSPFK 122


>ref|XP_002310446.1| predicted protein [Populus trichocarpa] gi|222853349|gb|EEE90896.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 44/114 (38%), Positives = 64/114 (56%), Gaps = 6/114 (5%)
 Frame = -3

Query: 396 MGSANKHH--SINNTNKLHLKNPXXXXXXXXXXXSPNMDFE----STPFTLDELEEDLIL 235
           M +ANK+H  S +   K H   P           + N        + P  L    +D +L
Sbjct: 1   MTAANKNHHPSSSKPPKNHHSTPKATTPQTNTTQNSNPTTNPNPAANPSPLSPSLKDQVL 60

Query: 234 SKSEYLTRQEVIRRRYRRLKLEIKVYEDYYWALMEDYRVKHREYYWNYGKSPFK 73
           S++ ++TRQE+++RR  +LK   K ++DYYWALME+ +V +REYYW YG SPFK
Sbjct: 61  SRATHITRQELLKRRSHKLKQLSKCFKDYYWALMEELKVLYREYYWKYGVSPFK 114


>ref|XP_002327853.1| predicted protein [Populus trichocarpa] gi|222837262|gb|EEE75641.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 41/112 (36%), Positives = 62/112 (55%)
 Frame = -3

Query: 408 LP*TMGSANKHHSINNTNKLHLKNPXXXXXXXXXXXSPNMDFESTPFTLDELEEDLILSK 229
           LP +      HHS  NT       P             N +  + P  L    +D +LS+
Sbjct: 9   LPSSSKPPKNHHSNPNTTTTTTPQPNITQ---------NPNPTTNPSPLSPTLKDQVLSR 59

Query: 228 SEYLTRQEVIRRRYRRLKLEIKVYEDYYWALMEDYRVKHREYYWNYGKSPFK 73
           + ++TRQE+++RR  +LK   K ++D+YWALME+ ++++REYYW YG SPFK
Sbjct: 60  ATHITRQELLKRRSYKLKQLSKCFKDHYWALMEELKIQYREYYWEYGVSPFK 111


>ref|XP_002263103.2| PREDICTED: INO80 complex subunit D-like [Vitis vinifera]
          Length = 248

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/69 (52%), Positives = 51/69 (73%)
 Frame = -3

Query: 279 STPFTLDELEEDLILSKSEYLTRQEVIRRRYRRLKLEIKVYEDYYWALMEDYRVKHREYY 100
           +TP T  ++  D +LS S YLTRQEVIRRR RR+K   K Y  +YW+LM++ ++++REYY
Sbjct: 6   ATPSTAVDVS-DAVLSSSRYLTRQEVIRRRSRRVKQLSKCYRAHYWSLMQELKIRYREYY 64

Query: 99  WNYGKSPFK 73
           W YG+S F+
Sbjct: 65  WKYGRSAFQ 73