BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013043
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG73415.1| chloroplast pigment-binding protein CP29 [Nicotia...   257   6e-67
ref|XP_002528105.1| chlorophyll A/B binding protein, putative [R...   254   4e-66
gb|ACO51068.1| chloroplast chlorophyll A-B binding protein [Goss...   252   3e-65
ref|XP_002323575.1| predicted protein [Populus trichocarpa] gi|2...   252   3e-65
gb|ABK96503.1| unknown [Populus trichocarpa x Populus deltoides]      252   3e-65

>gb|ABG73415.1| chloroplast pigment-binding protein CP29 [Nicotiana tabacum]
          Length = 285

 Score =  257 bits (657), Expect = 6e-67
 Identities = 120/135 (88%), Positives = 128/135 (94%)
 Frame = -2

Query: 407 KKPAKKTPAKFISDRPLWYPGAKAPEYLDGTLVGDYGFDPFGLGKPAEYLQYDLDSLDQN 228
           K   KK P + I DRPLWYPGAKAPEYLDG+LVGDYGFDPFGLGKPAEYLQ+DLDSLDQN
Sbjct: 34  KAAPKKAPKRQIPDRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQN 93

Query: 227 LAKNLAGDIIGTRTEVADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWL 48
           LAKNLAGD+IGTRTE+ADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWL
Sbjct: 94  LAKNLAGDVIGTRTELADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWL 153

Query: 47  SGVTWQDAGKVELVD 3
           +G+TWQDAGKVELV+
Sbjct: 154 TGITWQDAGKVELVE 168


>ref|XP_002528105.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223532494|gb|EEF34284.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 285

 Score =  254 bits (650), Expect = 4e-66
 Identities = 121/135 (89%), Positives = 128/135 (94%)
 Frame = -2

Query: 407 KKPAKKTPAKFISDRPLWYPGAKAPEYLDGTLVGDYGFDPFGLGKPAEYLQYDLDSLDQN 228
           KK A K  AK  SDRPLWYPGAKAPE+LDG+LVGDYGFDPFGLGKPAEYLQ++LDSLDQN
Sbjct: 37  KKSAPKRSAKPTSDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQN 96

Query: 227 LAKNLAGDIIGTRTEVADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWL 48
           LAKN+AGDIIGTRTE ADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWL
Sbjct: 97  LAKNIAGDIIGTRTEAADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWL 156

Query: 47  SGVTWQDAGKVELVD 3
           +GVTWQDAGKVELV+
Sbjct: 157 TGVTWQDAGKVELVE 171


>gb|ACO51068.1| chloroplast chlorophyll A-B binding protein [Gossypium hirsutum]
          Length = 285

 Score =  252 bits (643), Expect = 3e-65
 Identities = 119/135 (88%), Positives = 128/135 (94%)
 Frame = -2

Query: 407 KKPAKKTPAKFISDRPLWYPGAKAPEYLDGTLVGDYGFDPFGLGKPAEYLQYDLDSLDQN 228
           KK A K  +K  SDRPLWYPGA AP++LDG+LVGDYGFDPFGLGKPAEYLQYDLDSLDQN
Sbjct: 37  KKAAPKKASKQTSDRPLWYPGAVAPDWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN 96

Query: 227 LAKNLAGDIIGTRTEVADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWL 48
           LAKN+AG+IIGTRTEVADVK+TPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWL
Sbjct: 97  LAKNMAGEIIGTRTEVADVKATPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWL 156

Query: 47  SGVTWQDAGKVELVD 3
           +GVTWQDAGKVELV+
Sbjct: 157 TGVTWQDAGKVELVE 171


>ref|XP_002323575.1| predicted protein [Populus trichocarpa] gi|222868205|gb|EEF05336.1|
           predicted protein [Populus trichocarpa]
          Length = 283

 Score =  252 bits (643), Expect = 3e-65
 Identities = 119/134 (88%), Positives = 127/134 (94%)
 Frame = -2

Query: 404 KPAKKTPAKFISDRPLWYPGAKAPEYLDGTLVGDYGFDPFGLGKPAEYLQYDLDSLDQNL 225
           K A K   K I DRPLWYPGAKAPEYLDG+LVGDYGFDPFGLG+PAEYLQ++LDSLDQNL
Sbjct: 36  KKAPKKSIKTIPDRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGRPAEYLQFELDSLDQNL 95

Query: 224 AKNLAGDIIGTRTEVADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLS 45
           AKNLAGDIIGTRTEV+DVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAL+VEWL+
Sbjct: 96  AKNLAGDIIGTRTEVSDVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALSVEWLT 155

Query: 44  GVTWQDAGKVELVD 3
           GVTWQDAGKVELV+
Sbjct: 156 GVTWQDAGKVELVE 169


>gb|ABK96503.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 283

 Score =  252 bits (643), Expect = 3e-65
 Identities = 119/134 (88%), Positives = 127/134 (94%)
 Frame = -2

Query: 404 KPAKKTPAKFISDRPLWYPGAKAPEYLDGTLVGDYGFDPFGLGKPAEYLQYDLDSLDQNL 225
           K A K   K I DRPLWYPGAKAPEYLDG+LVGDYGFDPFGLG+PAEYLQ++LDSLDQNL
Sbjct: 36  KKAPKKSIKTIPDRPLWYPGAKAPEYLDGSLVGDYGFDPFGLGRPAEYLQFELDSLDQNL 95

Query: 224 AKNLAGDIIGTRTEVADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLS 45
           AKNLAGDIIGTRTEV+DVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAL+VEWL+
Sbjct: 96  AKNLAGDIIGTRTEVSDVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALSVEWLT 155

Query: 44  GVTWQDAGKVELVD 3
           GVTWQDAGKVELV+
Sbjct: 156 GVTWQDAGKVELVE 169