BLASTX nr result

ID: Coptis23_contig00013033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013033
         (1299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270524.1| PREDICTED: U-box domain-containing protein 1...   533   e-149
ref|XP_002311996.1| predicted protein [Populus trichocarpa] gi|2...   508   e-141
emb|CBI31426.3| unnamed protein product [Vitis vinifera]              501   e-139
ref|XP_002315320.1| predicted protein [Populus trichocarpa] gi|2...   496   e-138
ref|XP_003535520.1| PREDICTED: U-box domain-containing protein 1...   492   e-137

>ref|XP_002270524.1| PREDICTED: U-box domain-containing protein 14 [Vitis vinifera]
          Length = 628

 Score =  533 bits (1374), Expect = e-149
 Identities = 274/390 (70%), Positives = 317/390 (81%)
 Frame = +3

Query: 129  IVKHLLEIVKEISGFPECGNTSKKLYSNLVRRVKLLSPLFEDLKDSEGVLGEEEVRALVS 308
            ++  LL +VKEISG PEC NT+KK+Y NLVRRVKLLSPLFE+LKDSE  L + E+RA   
Sbjct: 12   VLNQLLAVVKEISGLPECRNTTKKMYYNLVRRVKLLSPLFEELKDSEEELEDSEIRAFEL 71

Query: 309  LKVALVSAKEILRSVIEGSKLYQALQKEDTAKRFQEVSEQIEKALDAISYGKLDISEEVL 488
            L+VAL SA ++L+ V EGSKLYQALQ++  A +F ++++QIE +L +I Y KL++SEEV 
Sbjct: 72   LRVALDSAMDLLKLVNEGSKLYQALQRDKIADKFCQMTDQIEASLSSIPYDKLNVSEEVQ 131

Query: 489  EQIELVHAQFKRAIERKDSPXXXXXXXXXXAQNDKDPNTVILKRISEKLQLRTINDLKKE 668
            EQIELVHAQFKRA  R DSP          AQ +KDP+  IL+R+SE LQLRTINDLKKE
Sbjct: 132  EQIELVHAQFKRAKGRTDSPDLQLDRDLEIAQKEKDPDPEILRRLSENLQLRTINDLKKE 191

Query: 669  SLALHELVVSEEGYPGDCLDEMSSLLKKLKESVISDKLDADASEGENRFMKQRSLVIPDD 848
            SLALHE+V+S    PGDC  +MSSLL+KLK+ V++   +AD SEGE  F+K RS VIPDD
Sbjct: 192  SLALHEMVISSSVDPGDCFAKMSSLLRKLKDYVLTINPEADTSEGEKGFIKHRSPVIPDD 251

Query: 849  FRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLSHTALTPNYVLKSLI 1028
            FRCPISLELM+DPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTL HTALTPNYVLKSLI
Sbjct: 252  FRCPISLELMRDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTALTPNYVLKSLI 311

Query: 1029 SQWCESNGVELPKKQANCRNKKSGSCNSDCDRAAITTLLQKLMNGNLEEQRAATGELRLL 1208
            + WCESNG+ELPK Q NCRNKK+G   SDCDR AI  LLQKL++GN E QRAA GELRLL
Sbjct: 312  ALWCESNGIELPKNQDNCRNKKTGKFVSDCDRPAIHALLQKLLDGNPEIQRAAAGELRLL 371

Query: 1209 AKRNADNRICIAEAGAIPLLVELLSSHDPR 1298
            AKRNADNR+CIAEAGAIP LVELLSS DPR
Sbjct: 372  AKRNADNRVCIAEAGAIPRLVELLSSTDPR 401


>ref|XP_002311996.1| predicted protein [Populus trichocarpa] gi|222851816|gb|EEE89363.1|
            predicted protein [Populus trichocarpa]
          Length = 628

 Score =  508 bits (1309), Expect = e-141
 Identities = 257/395 (65%), Positives = 311/395 (78%)
 Frame = +3

Query: 114  DEAKEIVKHLLEIVKEISGFPECGNTSKKLYSNLVRRVKLLSPLFEDLKDSEGVLGEEEV 293
            D + E++  L++ VKEISG PEC N  KK + +LVRR+KLLSP+FE+LKD+   L EEE 
Sbjct: 6    DPSSELLSRLVDSVKEISGLPECRNVFKKTHGDLVRRIKLLSPMFEELKDNNEELSEEET 65

Query: 294  RALVSLKVALVSAKEILRSVIEGSKLYQALQKEDTAKRFQEVSEQIEKALDAISYGKLDI 473
            +    L+  L SAKE+L+SV+EGSK+YQ LQ++D A +  +++E+IE AL  I Y KL++
Sbjct: 66   KGFELLRTVLDSAKELLKSVVEGSKVYQTLQRDDIADKINQITEKIEAALGEIPYDKLNL 125

Query: 474  SEEVLEQIELVHAQFKRAIERKDSPXXXXXXXXXXAQNDKDPNTVILKRISEKLQLRTIN 653
            SEEV EQIELVHAQF+RA  R++            AQ +KDP+  ILKR+SEKL L+TI+
Sbjct: 126  SEEVQEQIELVHAQFRRAKGRQELQDHQLEVDLAIAQREKDPDRAILKRLSEKLHLQTID 185

Query: 654  DLKKESLALHELVVSEEGYPGDCLDEMSSLLKKLKESVISDKLDADASEGENRFMKQRSL 833
            DLKKESLA HELV++  G PGD   +M+SL KKLK+ V ++  + D++E     +K RS 
Sbjct: 186  DLKKESLAFHELVIASGGDPGDWFKKMASLFKKLKDYVQTENPEIDSAEAGKGMIKHRSP 245

Query: 834  VIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLSHTALTPNYV 1013
            VIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTL HTALTPNYV
Sbjct: 246  VIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTALTPNYV 305

Query: 1014 LKSLISQWCESNGVELPKKQANCRNKKSGSCNSDCDRAAITTLLQKLMNGNLEEQRAATG 1193
            LKSLI+ WCESNGVELPK+   CR+KK GS  SDCDRAA+TTLL KL NG+LE+QR+A G
Sbjct: 306  LKSLIALWCESNGVELPKQPGACRSKKVGSSMSDCDRAAVTTLLDKLGNGSLEQQRSAAG 365

Query: 1194 ELRLLAKRNADNRICIAEAGAIPLLVELLSSHDPR 1298
            ELRLLAKRNADNR+CIAEAGA+PLLVELLSS DPR
Sbjct: 366  ELRLLAKRNADNRVCIAEAGAVPLLVELLSSTDPR 400


>emb|CBI31426.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  501 bits (1291), Expect = e-139
 Identities = 259/366 (70%), Positives = 298/366 (81%)
 Frame = +3

Query: 201  LYSNLVRRVKLLSPLFEDLKDSEGVLGEEEVRALVSLKVALVSAKEILRSVIEGSKLYQA 380
            +Y NLVRRVKLLSPLFE+LKDSE  L + E+RA   L+VAL SA ++L+ V EGSKLYQA
Sbjct: 1    MYYNLVRRVKLLSPLFEELKDSEEELEDSEIRAFELLRVALDSAMDLLKLVNEGSKLYQA 60

Query: 381  LQKEDTAKRFQEVSEQIEKALDAISYGKLDISEEVLEQIELVHAQFKRAIERKDSPXXXX 560
            LQ++  A +F ++++QIE +L +I Y KL++SEEV EQIELVHAQFKRA  R DSP    
Sbjct: 61   LQRDKIADKFCQMTDQIEASLSSIPYDKLNVSEEVQEQIELVHAQFKRAKGRTDSPDLQL 120

Query: 561  XXXXXXAQNDKDPNTVILKRISEKLQLRTINDLKKESLALHELVVSEEGYPGDCLDEMSS 740
                  AQ +KDP+  IL+R+SE LQLRTINDLKKESLALHE+V+S    PGDC  +MSS
Sbjct: 121  DRDLEIAQKEKDPDPEILRRLSENLQLRTINDLKKESLALHEMVISSSVDPGDCFAKMSS 180

Query: 741  LLKKLKESVISDKLDADASEGENRFMKQRSLVIPDDFRCPISLELMKDPVIVSTGQTYER 920
            LL+KLK+ V++   +AD SEGE  F+K RS VIPDDFRCPISLELM+DPVIVSTGQTYER
Sbjct: 181  LLRKLKDYVLTINPEADTSEGEKGFIKHRSPVIPDDFRCPISLELMRDPVIVSTGQTYER 240

Query: 921  SCIQKWLDAGHKTCPKTQQTLSHTALTPNYVLKSLISQWCESNGVELPKKQANCRNKKSG 1100
            SCIQKWLDAGHKTCPKTQQTL HTALTPNYVLKSLI+ WCESNG+ELPK Q NCRNKK+G
Sbjct: 241  SCIQKWLDAGHKTCPKTQQTLLHTALTPNYVLKSLIALWCESNGIELPKNQDNCRNKKTG 300

Query: 1101 SCNSDCDRAAITTLLQKLMNGNLEEQRAATGELRLLAKRNADNRICIAEAGAIPLLVELL 1280
               SDCDR AI  LLQKL++GN E QRAA GELRLLAKRNADNR+CIAEAGAIP LVELL
Sbjct: 301  KFVSDCDRPAIHALLQKLLDGNPEIQRAAAGELRLLAKRNADNRVCIAEAGAIPRLVELL 360

Query: 1281 SSHDPR 1298
            SS DPR
Sbjct: 361  SSTDPR 366


>ref|XP_002315320.1| predicted protein [Populus trichocarpa] gi|222864360|gb|EEF01491.1|
            predicted protein [Populus trichocarpa]
          Length = 628

 Score =  496 bits (1276), Expect = e-138
 Identities = 256/395 (64%), Positives = 302/395 (76%)
 Frame = +3

Query: 114  DEAKEIVKHLLEIVKEISGFPECGNTSKKLYSNLVRRVKLLSPLFEDLKDSEGVLGEEEV 293
            D   E++  L++ VKEIS  PEC N  KK++ NLVRR+KLLSPLFE+LKD+   L EEE 
Sbjct: 6    DPNSELMSGLVDSVKEISMSPECRNVCKKMHGNLVRRIKLLSPLFEELKDNNEELSEEET 65

Query: 294  RALVSLKVALVSAKEILRSVIEGSKLYQALQKEDTAKRFQEVSEQIEKALDAISYGKLDI 473
            +    L+ AL SAKE+L+ V+EGSK+YQ LQ++  A +F +++E+IE AL  I Y KL++
Sbjct: 66   KGFELLRTALDSAKELLKLVVEGSKVYQTLQRDHIADKFNQITEKIEAALSEIPYDKLNL 125

Query: 474  SEEVLEQIELVHAQFKRAIERKDSPXXXXXXXXXXAQNDKDPNTVILKRISEKLQLRTIN 653
            SEEV EQIELVHAQF+RA    + P          AQ +K+P+  ILKR+SE+L L+TI+
Sbjct: 126  SEEVQEQIELVHAQFRRAKGSPELPDHQLEVDLAIAQREKEPDPAILKRLSERLHLQTID 185

Query: 654  DLKKESLALHELVVSEEGYPGDCLDEMSSLLKKLKESVISDKLDADASEGENRFMKQRSL 833
            DLKKESLA HELV++  G PGD   +M+SL KKLK+ V     +AD S  E   MK RS 
Sbjct: 186  DLKKESLAFHELVIASGGDPGDWFKKMASLFKKLKDHVQMANPEADCSGAEKVMMKHRSP 245

Query: 834  VIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLSHTALTPNYV 1013
            VIPDDFRCPISLELMKDPVI+STGQTYERSCIQKWLDAGHKTCPKTQQTL HTALTPNYV
Sbjct: 246  VIPDDFRCPISLELMKDPVIISTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTALTPNYV 305

Query: 1014 LKSLISQWCESNGVELPKKQANCRNKKSGSCNSDCDRAAITTLLQKLMNGNLEEQRAATG 1193
            LKSLI+ WCESNGVELPK+   CR+K   S  S CDRAAI TLL KL NGNLE+QR+A G
Sbjct: 306  LKSLIALWCESNGVELPKQPGACRSKNVRSSISYCDRAAIATLLDKLANGNLEQQRSAAG 365

Query: 1194 ELRLLAKRNADNRICIAEAGAIPLLVELLSSHDPR 1298
            ELRLLAKRN DNR+CIAEAGAIPLLVELLSS DPR
Sbjct: 366  ELRLLAKRNVDNRVCIAEAGAIPLLVELLSSTDPR 400


>ref|XP_003535520.1| PREDICTED: U-box domain-containing protein 14-like [Glycine max]
          Length = 632

 Score =  492 bits (1267), Expect = e-137
 Identities = 256/392 (65%), Positives = 306/392 (78%), Gaps = 2/392 (0%)
 Frame = +3

Query: 129  IVKHLLEIVKEISGFPECGNTSKKLYSNLVRRVKLLSPLFEDLKD-SEGVLGEEEVRALV 305
            ++  L+E +KEISG PE  N  KK+Y NLVRRVKLLSPLFE+LKD S+  L +E++++  
Sbjct: 11   VMSRLVECIKEISGLPESQNLCKKVYGNLVRRVKLLSPLFEELKDNSDESLSDEQLQSFD 70

Query: 306  SLKVALVSAKEILRSVIEGSKLYQALQKEDTAKRFQEVSEQIEKALDAISYGKLDISEEV 485
            SL VAL SAK +L+ V +GSKLYQAL++ DTA +FQ+V+E+IE  L  I Y KLDIS+EV
Sbjct: 71   SLFVALGSAKTLLKDVNQGSKLYQALRRNDTADKFQKVTEKIEAVLSEIPYNKLDISDEV 130

Query: 486  LEQIELVHAQFKRAIERKDSPXXXXXXXXXXAQNDKDPNTVILKRISEKLQLRTINDLKK 665
             EQIELVHAQFKRA  + +            AQ +KDP   +LKR+SEKL LRTINDL+K
Sbjct: 131  REQIELVHAQFKRAKAQTEFADIQLDLDMAVAQKEKDPGPAVLKRLSEKLHLRTINDLRK 190

Query: 666  ESLALHELVVSEEGYPGDCLDEMSSLLKKLKESVISDKLDADASEGENRFMKQRSLVIPD 845
            ES  LHEL ++  G  GD  + ++SLL KL+E V+++  + D+SE E   +K RS +IPD
Sbjct: 191  ESSELHELFITSGGELGDSFEMITSLLSKLRECVLTENPEVDSSECEKLSVKHRSPMIPD 250

Query: 846  DFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLSHTALTPNYVLKSL 1025
            DFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTL HTALTPNYVLKSL
Sbjct: 251  DFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLVHTALTPNYVLKSL 310

Query: 1026 ISQWCESNGVELPKKQANCRNKK-SGSCNSDCDRAAITTLLQKLMNGNLEEQRAATGELR 1202
            I+ WCESNG+ELPKKQ NCR KK  GS  SDCDR AI+ LL KL + ++E+QRAA GELR
Sbjct: 311  IALWCESNGIELPKKQGNCRTKKCGGSSLSDCDRTAISALLDKLTSNDIEQQRAAAGELR 370

Query: 1203 LLAKRNADNRICIAEAGAIPLLVELLSSHDPR 1298
            LLAKRNADNR+CIAEAGAIP LV+LLSS DPR
Sbjct: 371  LLAKRNADNRVCIAEAGAIPPLVDLLSSSDPR 402


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