BLASTX nr result

ID: Coptis23_contig00013020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013020
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29933.3| unnamed protein product [Vitis vinifera]               88   1e-15
ref|XP_002276958.1| PREDICTED: uncharacterized protein LOC100262...    88   1e-15
emb|CAN71660.1| hypothetical protein VITISV_016185 [Vitis vinifera]    88   1e-15
ref|XP_002525438.1| conserved hypothetical protein [Ricinus comm...    81   2e-13
ref|XP_002325413.1| predicted protein [Populus trichocarpa] gi|2...    78   2e-12

>emb|CBI29933.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 63/175 (36%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
 Frame = -1

Query: 503  QRSSSQINIDNVKIYTTPRKLLHSLQDLDDENSDYFEEQARRIISPCSSKSEWSPTSPLD 324
            QR  SQIN+DNV IYTTPRKL+HSLQD     S++ E+Q RR+ SP  SK EWSP+    
Sbjct: 554  QRLRSQINVDNVNIYTTPRKLVHSLQD-----SNFSEKQNRRLRSPSPSKYEWSPSVNYG 608

Query: 323  GDGHYHNSE----DNGNCSSSELGXXXXXXXXXXXXXXXXXXXXQPDASLEIGSNEKSVI 156
              G  H+      +NGN SS   G                        S E+   +    
Sbjct: 609  QSGFSHDMNYEVGENGNLSSGGGGDQSQGDSESVSSTEDVPTEANVQVSHEVIPGDTIDT 668

Query: 155  QSSNTPPMVSW--------KNVLKWVFGLLFILLAFVVSFMWSNNAEEGSYLPPT 15
            Q      MV          K   K V+GL+F+L A +VS +W +  + G  L PT
Sbjct: 669  QGVGMVGMVGMVGMKKAGEKISFKLVYGLIFLLFATLVSLLWVDTQDGGYNLVPT 723


>ref|XP_002276958.1| PREDICTED: uncharacterized protein LOC100262437 [Vitis vinifera]
          Length = 615

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 63/175 (36%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
 Frame = -1

Query: 503 QRSSSQINIDNVKIYTTPRKLLHSLQDLDDENSDYFEEQARRIISPCSSKSEWSPTSPLD 324
           QR  SQIN+DNV IYTTPRKL+HSLQD     S++ E+Q RR+ SP  SK EWSP+    
Sbjct: 446 QRLRSQINVDNVNIYTTPRKLVHSLQD-----SNFSEKQNRRLRSPSPSKYEWSPSVNYG 500

Query: 323 GDGHYHNSE----DNGNCSSSELGXXXXXXXXXXXXXXXXXXXXQPDASLEIGSNEKSVI 156
             G  H+      +NGN SS   G                        S E+   +    
Sbjct: 501 QSGFSHDMNYEVGENGNLSSGGGGDQSQGDSESVSSTEDVPTEANVQVSHEVIPGDTIDT 560

Query: 155 QSSNTPPMVSW--------KNVLKWVFGLLFILLAFVVSFMWSNNAEEGSYLPPT 15
           Q      MV          K   K V+GL+F+L A +VS +W +  + G  L PT
Sbjct: 561 QGVGMVGMVGMVGMKKAGEKISFKLVYGLIFLLFATLVSLLWVDTQDGGYNLVPT 615


>emb|CAN71660.1| hypothetical protein VITISV_016185 [Vitis vinifera]
          Length = 615

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 62/175 (35%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
 Frame = -1

Query: 503 QRSSSQINIDNVKIYTTPRKLLHSLQDLDDENSDYFEEQARRIISPCSSKSEWSPTSPLD 324
           QR  SQIN+DNV IYTTPRKL+HSLQD     S++ E+Q RR+ SP  SK EWSP+    
Sbjct: 446 QRLRSQINVDNVNIYTTPRKLVHSLQD-----SNFSEKQNRRLRSPSPSKYEWSPSVNYG 500

Query: 323 GDGHYHNSE----DNGNCSSSELGXXXXXXXXXXXXXXXXXXXXQPDASLEIGSNEKSVI 156
             G  H+      +NGN SS   G                        S E+   +    
Sbjct: 501 QSGFSHDMNYEVGENGNLSSGGGGDQSQGDSESVSSTEDVPTEANVQVSHEVIPGDTIDT 560

Query: 155 QSSNTPPMVSWKNV--------LKWVFGLLFILLAFVVSFMWSNNAEEGSYLPPT 15
           Q      MV    +         K V+GL+F+L A +VS +W +  + G  L PT
Sbjct: 561 QGVGMVGMVGMVGMKKAGENISFKLVYGLIFLLFATLVSLLWVDTQDGGYNLVPT 615


>ref|XP_002525438.1| conserved hypothetical protein [Ricinus communis]
           gi|223535251|gb|EEF36928.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 603

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 57/169 (33%), Positives = 81/169 (47%), Gaps = 6/169 (3%)
 Frame = -1

Query: 503 QRSSSQINIDNVKIYTTPRKLLHSLQDLDDENSDYFEEQARRIISPCSSKSEWSPTSPLD 324
           QRS S +N+D++ I+TTPRKL+HSLQ+ +D +SD+ E Q+RR  SP S K ++SP    +
Sbjct: 441 QRSRSHLNVDDINIFTTPRKLIHSLQEPNDVDSDFSERQSRRFRSP-SRKYDYSPNMKFN 499

Query: 323 GDG--HYHNSEDNGNCSSSELGXXXXXXXXXXXXXXXXXXXXQPDASLEIGSNEKSVIQS 150
            +G  H+   E   N +S   G                        S E+ S  K     
Sbjct: 500 RNGFQHHEGYEVEENRNSYAGGEQLQGTSESVSSTDDVPVHTDVQLSPEVLSGNK----- 554

Query: 149 SNTPPMVS----WKNVLKWVFGLLFILLAFVVSFMWSNNAEEGSYLPPT 15
            + P   S     KN  +   GL F LLA   S +W ++ + G YL PT
Sbjct: 555 DDAPRFCSRKDHRKNFYRLFGGLFFALLAIFSSLLWIDSQDNGGYLVPT 603


>ref|XP_002325413.1| predicted protein [Populus trichocarpa] gi|222862288|gb|EEE99794.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 54/165 (32%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
 Frame = -1

Query: 503 QRSSSQINIDNVKIYTTPRKLLHSLQDLDDENSDYFEEQARRIISPCSSKSEWSPTSPLD 324
           QRS S IN++NV I+TTPRKL+H+LQD +D +SD+ E+Q  R  SPCS K ++ PT  L 
Sbjct: 445 QRSRSHINVNNVSIFTTPRKLVHALQDPNDLDSDFSEKQNERFGSPCSCKFDYRPTLRLK 504

Query: 323 GDGHYHN--SEDNGNCSSSELGXXXXXXXXXXXXXXXXXXXXQPDASLEIGSNEKSVIQS 150
            +G   +  SE N N +S   G                        S E+   +K+    
Sbjct: 505 QNGFQQDMGSEVNENGNSYAGGEQLQGPSESVASTEEIPVNTDTQVSTEVILGKKTDDPK 564

Query: 149 SNTPPMVSWKNVLKWVFGLLFILLAFVVSFMWSNNAEEGSYLPPT 15
            N       K     V G    LLA + S M+    ++  ++ PT
Sbjct: 565 KNCAEREMRKTSSLLVVGFCIALLAILASLMFIYLQDDSHHMVPT 609


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