BLASTX nr result
ID: Coptis23_contig00013014
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00013014
(921 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279535.1| PREDICTED: uncharacterized protein LOC100255... 449 e-124
ref|XP_002312411.1| predicted protein [Populus trichocarpa] gi|2... 444 e-122
ref|XP_002533697.1| zinc finger protein, putative [Ricinus commu... 439 e-121
dbj|BAF38781.1| putative E3 ubiquitin ligase [Lotus japonicus] 437 e-120
ref|XP_002527005.1| zinc finger protein, putative [Ricinus commu... 437 e-120
>ref|XP_002279535.1| PREDICTED: uncharacterized protein LOC100255880 [Vitis vinifera]
Length = 1237
Score = 449 bits (1155), Expect = e-124
Identities = 228/306 (74%), Positives = 245/306 (80%)
Frame = -3
Query: 919 LLWGLYRAHSNAEDEIVFPALESRESLHNVSHSYTLDHKQEEKLFEDIXXXXXXXXXXXX 740
LLWGLYRAHSNAED+IVFPALESRE+LHNVSHSYTLDHKQEEKLFEDI
Sbjct: 687 LLWGLYRAHSNAEDDIVFPALESRETLHNVSHSYTLDHKQEEKLFEDISSVLSDLTLLHE 746
Query: 739 XXSKTKLSIESTGSKFDSSTAHGNDCIRKYNELATKLQGMCKSIRVTLDHHVFREELELW 560
+ + EST DSS H ND IRKYNELATKLQGMCKSIRVTLD HV+REELELW
Sbjct: 747 SLNSANMPEESTRINLDSS--HHNDSIRKYNELATKLQGMCKSIRVTLDQHVYREELELW 804
Query: 559 PLFDRHFSVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQEEQNKMMDTWKQATKNTMF 380
PLFD+HFSVEEQDKIVGRIIGTTGAEVLQSMLPWVTS LT+EEQNKMMDTWKQATKNTMF
Sbjct: 805 PLFDKHFSVEEQDKIVGRIIGTTGAEVLQSMLPWVTSVLTEEEQNKMMDTWKQATKNTMF 864
Query: 379 SEWLNEWWKGXXXXXXXXXXXXXXXSQEGTSIQESLDQTDQMFKPGWKDIFRMNQNELES 200
SEWLNEWW+G SQ G ++ ESLD +D FKPGWKDIFRMN+NELES
Sbjct: 865 SEWLNEWWEGTAAASPLAFTSENKISQ-GINVHESLDHSDHTFKPGWKDIFRMNENELES 923
Query: 199 EIRKVSRDPTLDPRRKAYLIQNLMTSRWIAAQQKLPEARSGEPLSDGNVPGYSPSFRDEE 20
EIRKVSRD TLDPRRK YLIQNLMTSRWIAAQQKLP+AR+ E + NV G PSFRD +
Sbjct: 924 EIRKVSRDSTLDPRRKDYLIQNLMTSRWIAAQQKLPQARTVETSNGENVLGCIPSFRDPD 983
Query: 19 KQVFGC 2
KQ+FGC
Sbjct: 984 KQIFGC 989
Score = 58.9 bits (141), Expect = 2e-06
Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 6/181 (3%)
Frame = -3
Query: 895 HSNAEDEIVFPALESRESLHNVSHSYTLDHKQEEKLFEDIXXXXXXXXXXXXXXSKTKLS 716
HS AED+++FPA+++ S + +H +EE F+ + S
Sbjct: 349 HSIAEDKVIFPAVDAELS-------FAQEHAEEESQFDKLRCLIE--------------S 387
Query: 715 IESTGSKFDSSTAHGNDCIRKYNELATKLQGMCKSIRVTLDHHVFREELELWPLFDRHFS 536
I+S G+ S+ E TKL I T+ H EE+++ PL +HFS
Sbjct: 388 IQSAGANSSSA------------EFYTKLCSQADQIMDTIQKHFHNEEVQVLPLARKHFS 435
Query: 535 VEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQEEQNKMMDTWKQATKN------TMFSE 374
+ Q +++ + + +++ +LPW+ +L +E + A T+FS
Sbjct: 436 PKRQRELLYQSLCVMPLRLIECVLPWLVGSLDEEAARSFLQNMHLAAPASDNALVTLFSG 495
Query: 373 W 371
W
Sbjct: 496 W 496
>ref|XP_002312411.1| predicted protein [Populus trichocarpa] gi|222852231|gb|EEE89778.1|
predicted protein [Populus trichocarpa]
Length = 1037
Score = 444 bits (1143), Expect = e-122
Identities = 224/306 (73%), Positives = 245/306 (80%)
Frame = -3
Query: 919 LLWGLYRAHSNAEDEIVFPALESRESLHNVSHSYTLDHKQEEKLFEDIXXXXXXXXXXXX 740
LLWGLYRAHSNAEDEIVFPALES+E+LHNVSHSYTLDHKQEEKLFEDI
Sbjct: 491 LLWGLYRAHSNAEDEIVFPALESKETLHNVSHSYTLDHKQEEKLFEDISSALSELTQLHE 550
Query: 739 XXSKTKLSIESTGSKFDSSTAHGNDCIRKYNELATKLQGMCKSIRVTLDHHVFREELELW 560
T + + G DSS ND +R+YNELATKLQGMCKSIRVTLD HVFREELELW
Sbjct: 551 YMKNTNHADDLIGKCADSSDC--NDSVRQYNELATKLQGMCKSIRVTLDQHVFREELELW 608
Query: 559 PLFDRHFSVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQEEQNKMMDTWKQATKNTMF 380
PLFDRHFSVEEQDKIVG+IIGTTGAEVLQSMLPWVTSALTQEEQN+MMDTWKQATKNTMF
Sbjct: 609 PLFDRHFSVEEQDKIVGQIIGTTGAEVLQSMLPWVTSALTQEEQNRMMDTWKQATKNTMF 668
Query: 379 SEWLNEWWKGXXXXXXXXXXXXXXXSQEGTSIQESLDQTDQMFKPGWKDIFRMNQNELES 200
SEWLNEWW+G + E + SLDQ+D FKPGWKDIFRMNQNELE+
Sbjct: 669 SEWLNEWWEG------TSAATPLKTASESNDLHASLDQSDHTFKPGWKDIFRMNQNELEA 722
Query: 199 EIRKVSRDPTLDPRRKAYLIQNLMTSRWIAAQQKLPEARSGEPLSDGNVPGYSPSFRDEE 20
EIRKVSRD TLDPRRKAYLIQNLMTSRWIA+QQK P+AR+G+ + G++ G SPSFRD +
Sbjct: 723 EIRKVSRDSTLDPRRKAYLIQNLMTSRWIASQQKSPQARTGDHSNGGDLLGCSPSFRDPD 782
Query: 19 KQVFGC 2
KQVFGC
Sbjct: 783 KQVFGC 788
>ref|XP_002533697.1| zinc finger protein, putative [Ricinus communis]
gi|223526392|gb|EEF28680.1| zinc finger protein, putative
[Ricinus communis]
Length = 1251
Score = 439 bits (1128), Expect = e-121
Identities = 215/306 (70%), Positives = 240/306 (78%)
Frame = -3
Query: 919 LLWGLYRAHSNAEDEIVFPALESRESLHNVSHSYTLDHKQEEKLFEDIXXXXXXXXXXXX 740
LLWGLYRAHSNAED+IVFPALES+E+LHNVSHSY LDHKQEEKLFEDI
Sbjct: 697 LLWGLYRAHSNAEDDIVFPALESKEALHNVSHSYMLDHKQEEKLFEDISCILSELSGLHE 756
Query: 739 XXSKTKLSIESTGSKFDSSTAHGNDCIRKYNELATKLQGMCKSIRVTLDHHVFREELELW 560
+ L S GS + S AH +DC+ KY ELATKLQGMCKSIRVTLDHH+FREELELW
Sbjct: 757 NLHRAHLMEASAGSNMEISVAHDDDCMVKYAELATKLQGMCKSIRVTLDHHIFREELELW 816
Query: 559 PLFDRHFSVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQEEQNKMMDTWKQATKNTMF 380
PLF +H SV+EQDKIVGRIIGTTGAEVLQSMLPWVTSALTQ+EQNKMMDTWKQA KNTMF
Sbjct: 817 PLFGKHISVQEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMDTWKQAAKNTMF 876
Query: 379 SEWLNEWWKGXXXXXXXXXXXXXXXSQEGTSIQESLDQTDQMFKPGWKDIFRMNQNELES 200
++WLNE+WKG +E ++SLD TDQMFKPGWK+IFRMN+NELES
Sbjct: 877 NDWLNEFWKGPTESSLQTEPSESSIFEEAKEFKDSLDPTDQMFKPGWKNIFRMNENELES 936
Query: 199 EIRKVSRDPTLDPRRKAYLIQNLMTSRWIAAQQKLPEARSGEPLSDGNVPGYSPSFRDEE 20
EIRKV RD TLDPRRKAYL+QNL+TSRWIAAQQKLP+ S E +D +V SPS+RD E
Sbjct: 937 EIRKVYRDSTLDPRRKAYLVQNLLTSRWIAAQQKLPQTTSDETSNDDDVMECSPSYRDHE 996
Query: 19 KQVFGC 2
QVFGC
Sbjct: 997 NQVFGC 1002
Score = 57.0 bits (136), Expect = 6e-06
Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 6/181 (3%)
Frame = -3
Query: 895 HSNAEDEIVFPALESRESLHNVSHSYTLDHKQEEKLFEDIXXXXXXXXXXXXXXSKTKLS 716
HS AED+++FPA++ S+ +H +EE F
Sbjct: 360 HSIAEDKVIFPAVDGE-------FSFFQEHAEEESQFNAFRSLIE--------------G 398
Query: 715 IESTGSKFDSSTAHGNDCIRKYNELATKLQGMCKSIRVTLDHHVFREELELWPLFDRHFS 536
I+ +G+ +S+ E KL I T++ H + EE+++ PL +HFS
Sbjct: 399 IQRSGANSNSAA-----------EFYAKLCSHADQIIETIEKHFYNEEVQVLPLARKHFS 447
Query: 535 VEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQEEQNKMMDTWKQATKN------TMFSE 374
+ Q ++ + + ++++ +LPW+ LT+ E + + A + T+F+
Sbjct: 448 FKRQQDLLYQSLCVMPLKLIERVLPWLVGTLTEVEAKNFLKNMQSAAPSTDAALVTLFTG 507
Query: 373 W 371
W
Sbjct: 508 W 508
>dbj|BAF38781.1| putative E3 ubiquitin ligase [Lotus japonicus]
Length = 1236
Score = 437 bits (1125), Expect = e-120
Identities = 223/306 (72%), Positives = 241/306 (78%)
Frame = -3
Query: 919 LLWGLYRAHSNAEDEIVFPALESRESLHNVSHSYTLDHKQEEKLFEDIXXXXXXXXXXXX 740
LLWGLYRAHSNAED+IVFPALES+E+LHNVSHSY LDHKQEE+LFEDI
Sbjct: 688 LLWGLYRAHSNAEDDIVFPALESKEALHNVSHSYMLDHKQEEQLFEDISCVLSELSVLHE 747
Query: 739 XXSKTKLSIESTGSKFDSSTAHGNDCIRKYNELATKLQGMCKSIRVTLDHHVFREELELW 560
T +S E + S F +S A+G D I+K+NELATKLQGMCKS+RVTLD H+FREE ELW
Sbjct: 748 ALQMTHMSEELSESNFGTSDANGTDDIKKFNELATKLQGMCKSVRVTLDQHIFREERELW 807
Query: 559 PLFDRHFSVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQEEQNKMMDTWKQATKNTMF 380
PLF RHF+VEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQEEQN +MDTWKQATKNTMF
Sbjct: 808 PLFGRHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQEEQNTLMDTWKQATKNTMF 867
Query: 379 SEWLNEWWKGXXXXXXXXXXXXXXXSQEGTSIQESLDQTDQMFKPGWKDIFRMNQNELES 200
SEWLNE WK SQ G+ QESLD TDQMFKPGWKDIFRMNQNELES
Sbjct: 868 SEWLNECWKESQASVVQTETSDYSTSQRGSENQESLDHTDQMFKPGWKDIFRMNQNELES 927
Query: 199 EIRKVSRDPTLDPRRKAYLIQNLMTSRWIAAQQKLPEARSGEPLSDGNVPGYSPSFRDEE 20
EIRKV RD TLDPRRKAYL+QNLMTSRWIAAQQK P+A S E S + GYSPSFRD
Sbjct: 928 EIRKVYRDSTLDPRRKAYLVQNLMTSRWIAAQQKSPKAPS-EGSSGVEIEGYSPSFRDPG 986
Query: 19 KQVFGC 2
K VFGC
Sbjct: 987 KHVFGC 992
Score = 56.6 bits (135), Expect = 8e-06
Identities = 39/170 (22%), Positives = 75/170 (44%)
Frame = -3
Query: 895 HSNAEDEIVFPALESRESLHNVSHSYTLDHKQEEKLFEDIXXXXXXXXXXXXXXSKTKLS 716
HS AED+++FPA++ S+ +H +EE F D
Sbjct: 349 HSIAEDKVIFPAVDGE-------FSFFQEHAEEESQFNDFRSLIE--------------G 387
Query: 715 IESTGSKFDSSTAHGNDCIRKYNELATKLQGMCKSIRVTLDHHVFREELELWPLFDRHFS 536
I++ G+ +S E +KL I T+ H EE+++ PL +HFS
Sbjct: 388 IQNEGASSNSEV-----------EFYSKLCSHADHIMETIQRHFHNEEVQVLPLARKHFS 436
Query: 535 VEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQEEQNKMMDTWKQATKNT 386
+ Q +++ + + ++++ +LPW+ +LT++E ++ + A T
Sbjct: 437 FKRQCELLYQSLCMMPLKLIERVLPWLVGSLTEKEAKIFLNNMQLAAPAT 486
>ref|XP_002527005.1| zinc finger protein, putative [Ricinus communis]
gi|223533640|gb|EEF35377.1| zinc finger protein, putative
[Ricinus communis]
Length = 1306
Score = 437 bits (1123), Expect = e-120
Identities = 219/306 (71%), Positives = 242/306 (79%)
Frame = -3
Query: 919 LLWGLYRAHSNAEDEIVFPALESRESLHNVSHSYTLDHKQEEKLFEDIXXXXXXXXXXXX 740
LLWGLYRAHSNAED+IVFPALES+E+LHNVSHSYTLDHKQEEKLFEDI
Sbjct: 699 LLWGLYRAHSNAEDDIVFPALESKETLHNVSHSYTLDHKQEEKLFEDISSALSELTKFQE 758
Query: 739 XXSKTKLSIESTGSKFDSSTAHGNDCIRKYNELATKLQGMCKSIRVTLDHHVFREELELW 560
++S + TG+ +D+S H +D R+YNELATKLQGMCKSIRVTLD HVFREELELW
Sbjct: 759 CLKSARISDDLTGNGYDAS-GHSDDTFRQYNELATKLQGMCKSIRVTLDQHVFREELELW 817
Query: 559 PLFDRHFSVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQEEQNKMMDTWKQATKNTMF 380
PLFD HFSVEEQDKIVGRIIG+TGAEVLQSMLPWVTSALT EEQNKMMDTWK ATKNTMF
Sbjct: 818 PLFDMHFSVEEQDKIVGRIIGSTGAEVLQSMLPWVTSALTLEEQNKMMDTWKNATKNTMF 877
Query: 379 SEWLNEWWKGXXXXXXXXXXXXXXXSQEGTSIQESLDQTDQMFKPGWKDIFRMNQNELES 200
SEWLNEWW+G G + ESLD +D FKPGWKDIFRMNQNELE+
Sbjct: 878 SEWLNEWWEGTSAAASQATSESCISL--GADLHESLDHSDHTFKPGWKDIFRMNQNELEA 935
Query: 199 EIRKVSRDPTLDPRRKAYLIQNLMTSRWIAAQQKLPEARSGEPLSDGNVPGYSPSFRDEE 20
EIRKVSRD +LDPRRKAYLIQNLMTSRWIAAQQK P+AR+ E + ++ G PSFRD E
Sbjct: 936 EIRKVSRDSSLDPRRKAYLIQNLMTSRWIAAQQKSPQARTDECSNSEDLLGCFPSFRDLE 995
Query: 19 KQVFGC 2
KQ+FGC
Sbjct: 996 KQIFGC 1001
Score = 57.0 bits (136), Expect = 6e-06
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 6/181 (3%)
Frame = -3
Query: 895 HSNAEDEIVFPALESRESLHNVSHSYTLDHKQEEKLFEDIXXXXXXXXXXXXXXSKTKLS 716
HS AED+++FPA+++ + + +H +EE F+ + S
Sbjct: 360 HSIAEDKVIFPAVDAELN-------FAEEHAEEEIQFDKLRCLIE--------------S 398
Query: 715 IESTGSKFDSSTAHGNDCIRKYNELATKLQGMCKSIRVTLDHHVFREELELWPLFDRHFS 536
I+S G+ +T+H E TKL I ++ H EE ++ PL +HFS
Sbjct: 399 IQSAGA----NTSH--------TEFYTKLCTQADHIMDSIQKHFQNEEAQVLPLARKHFS 446
Query: 535 VEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQEEQNKMMDTWKQATKN------TMFSE 374
+ Q +++ + + ++++ +LPW+ +L++EE + A T+FS
Sbjct: 447 AKRQRELLYQSLCVMPLKLIECVLPWLVGSLSEEEAKSFLQNMYMAAPASDSALVTLFSG 506
Query: 373 W 371
W
Sbjct: 507 W 507