BLASTX nr result

ID: Coptis23_contig00013010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013010
         (1335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284845.1| PREDICTED: uncharacterized protein LOC100254...   394   e-107
ref|XP_002327157.1| predicted protein [Populus trichocarpa] gi|2...   376   e-102
ref|XP_002301174.1| predicted protein [Populus trichocarpa] gi|2...   376   e-102
emb|CBI19503.3| unnamed protein product [Vitis vinifera]              374   e-101
ref|XP_002510197.1| conserved hypothetical protein [Ricinus comm...   366   6e-99

>ref|XP_002284845.1| PREDICTED: uncharacterized protein LOC100254049 [Vitis vinifera]
          Length = 319

 Score =  394 bits (1013), Expect = e-107
 Identities = 203/318 (63%), Positives = 234/318 (73%), Gaps = 2/318 (0%)
 Frame = +2

Query: 83   MHAKTDSEVTSLAPSSPTRSPRRQVYYVQSPSRDSHDGEKTTTSFHSTPVLXXXXXXXXX 262
            MHAKTDSEVTSLA SSPTRSPRR VYYVQSPSRDSHDGEKTTTSFHSTPVL         
Sbjct: 1    MHAKTDSEVTSLAASSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPMGSPPHS 60

Query: 263  XXXXXXXXXXXXXXXXXXXLKPGSRKILPNDGSRG-NRKGQKPWKECDVIXXXXXXXXXX 439
                               LKPGSRKI PND SRG +RKG+KPWKEC VI          
Sbjct: 61   HSSVGRHSRESSSSRFSGSLKPGSRKISPNDASRGGHRKGEKPWKECAVIEEEGLLEDEE 120

Query: 440  RHSGFPRRCYFPAXXXXXXXXXXXXXXILYGASRPQKPKISMKSITFEQFVIQAGSDNSG 619
            R  G PRRCYF A              IL+GAS+PQKPKI+MKSITFE+FV+QAGSD++G
Sbjct: 121  RQKGLPRRCYFLAFVVGFFVLFSLFSLILWGASKPQKPKITMKSITFERFVVQAGSDSTG 180

Query: 620  VATDMLSMNSSVKFTFRNTATFFGLHVVPTTIDISYSQLNVATGTVQKFYQSRKSQRTVT 799
            VATDM+SMNS+VK TFRNTATFFG+HV  T +D+SYS+L VA+GT++KFYQSRKS R++T
Sbjct: 181  VATDMVSMNSTVKLTFRNTATFFGVHVTSTPLDLSYSRLRVASGTIKKFYQSRKSHRSLT 240

Query: 800  AVMEGNMIPLYGSGAGLSTSKGIVNNPVPLKLNFMVKARGYVLGKLVKPKFHKTVECSVV 979
             V+ G+ IPLYG GA LSTS G    P+PLKL+FM+++R YVLGKLVKPKF+K +ECSV 
Sbjct: 241  IVLMGDKIPLYGGGASLSTSTGTTTEPLPLKLSFMLRSRAYVLGKLVKPKFYKRIECSVN 300

Query: 980  LDPKTLNVPIPL-KNCTY 1030
            LDPK LNVP+ L K+CTY
Sbjct: 301  LDPKKLNVPLSLKKSCTY 318


>ref|XP_002327157.1| predicted protein [Populus trichocarpa] gi|222835472|gb|EEE73907.1|
            predicted protein [Populus trichocarpa]
          Length = 318

 Score =  376 bits (966), Expect = e-102
 Identities = 191/317 (60%), Positives = 224/317 (70%), Gaps = 1/317 (0%)
 Frame = +2

Query: 83   MHAKTDSEVTSLAPSSPTRSPRRQVYYVQSPSRDSHDGEKTTTSFHSTPVLXXXXXXXXX 262
            MHAKTDSEVTSLAPSSPTRSPRR VYYVQSPSRDSHDGEKTTTSFHSTPVL         
Sbjct: 1    MHAKTDSEVTSLAPSSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPMGSPPHS 60

Query: 263  XXXXXXXXXXXXXXXXXXXLKPGSRKILPNDGSRGNRKGQKPWKECDVIXXXXXXXXXXR 442
                               LKPGSRKI PND SRG RKGQK WKECDVI          R
Sbjct: 61   HSSVGRHSRESSSSRFSGSLKPGSRKISPNDASRGGRKGQKQWKECDVIEEEGLLDDEER 120

Query: 443  HSGFPRRCYFPAXXXXXXXXXXXXXXILYGASRPQKPKISMKSITFEQFVIQAGSDNSGV 622
              G PR+CYF A              IL+GAS+ QKPKI+MKS+TFEQF IQAGSD++GV
Sbjct: 121  RKGLPRKCYFLAFVLGFFILFSFFSLILWGASKQQKPKITMKSVTFEQFRIQAGSDSTGV 180

Query: 623  ATDMLSMNSSVKFTFRNTATFFGLHVVPTTIDISYSQLNVATGTVQKFYQSRKSQRTVTA 802
            ATDM+S+NS+V+ T+RN  TFFG+HV  T +D+SYS++ +A+G+++KFYQSRKSQR+V  
Sbjct: 181  ATDMISVNSTVRMTYRNKGTFFGVHVTSTPLDLSYSEITLASGSIKKFYQSRKSQRSVAI 240

Query: 803  VMEGNMIPLYGSGAGLSTSKGIVNNPVPLKLNFMVKARGYVLGKLVKPKFHKTVECSVVL 982
             +  + IPLYGSGA  S+S G    PVPLK+NF+V+++ YVLGKLVKPKF+K +EC    
Sbjct: 241  SLISDKIPLYGSGAAFSSSTGTATLPVPLKVNFVVRSKAYVLGKLVKPKFNKRIECDFTF 300

Query: 983  DPKTLNVPIPL-KNCTY 1030
            DPK LNVPI L K CTY
Sbjct: 301  DPKKLNVPISLQKACTY 317


>ref|XP_002301174.1| predicted protein [Populus trichocarpa] gi|222842900|gb|EEE80447.1|
            predicted protein [Populus trichocarpa]
          Length = 319

 Score =  376 bits (965), Expect = e-102
 Identities = 195/318 (61%), Positives = 223/318 (70%), Gaps = 2/318 (0%)
 Frame = +2

Query: 83   MHAKTDSEVTSLAPSSPTRSPRRQVYYVQSPSRDSHDGEKTTTSFHSTPVLXXXXXXXXX 262
            MHAKTDSEVTSLAPSSPTRSPRR VYYVQSPSRDSHDGEKTTTSFHSTPVL         
Sbjct: 1    MHAKTDSEVTSLAPSSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPMGSPPHS 60

Query: 263  XXXXXXXXXXXXXXXXXXXLKPGSRKILPNDGSRGNR-KGQKPWKECDVIXXXXXXXXXX 439
                               LKPGSRKI PND SRG + KGQK WKECDVI          
Sbjct: 61   HSSVGRHSRESSSSRFSGSLKPGSRKISPNDASRGGQGKGQKQWKECDVIEEEGLLEDEE 120

Query: 440  RHSGFPRRCYFPAXXXXXXXXXXXXXXILYGASRPQKPKISMKSITFEQFVIQAGSDNSG 619
            R  G PRRCYF A              IL+GAS+PQKPKI+MKSITFEQF IQAGSD++G
Sbjct: 121  RRKGLPRRCYFLAFVLGFFILFSLFSLILWGASKPQKPKITMKSITFEQFRIQAGSDSTG 180

Query: 620  VATDMLSMNSSVKFTFRNTATFFGLHVVPTTIDISYSQLNVATGTVQKFYQSRKSQRTVT 799
            VATDM+S+NS+VK T+RN  TFFG+ V  T +D+SYS++ +A+G ++KFYQSRKSQR V 
Sbjct: 181  VATDMISVNSTVKMTYRNKGTFFGVRVTSTPLDLSYSEITIASGNIKKFYQSRKSQRPVA 240

Query: 800  AVMEGNMIPLYGSGAGLSTSKGIVNNPVPLKLNFMVKARGYVLGKLVKPKFHKTVECSVV 979
              +  N IPLYGSGAGLS+S G    PVPLK+NF+V++R YVLGKLVK KF++ +EC   
Sbjct: 241  IPVISNKIPLYGSGAGLSSSTGTTTLPVPLKMNFVVRSRAYVLGKLVKTKFNRKIECDFT 300

Query: 980  LDPKTLNVPIPLKN-CTY 1030
             DPK LNVPI LK  CTY
Sbjct: 301  FDPKKLNVPISLKEACTY 318


>emb|CBI19503.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  374 bits (961), Expect = e-101
 Identities = 196/318 (61%), Positives = 227/318 (71%), Gaps = 2/318 (0%)
 Frame = +2

Query: 83   MHAKTDSEVTSLAPSSPTRSPRRQVYYVQSPSRDSHDGEKTTTSFHSTPVLXXXXXXXXX 262
            MHAKTDSEVTSLA SSPTRSPRR VYYVQSPSRDSHDGEKTTTSFHSTPVL         
Sbjct: 1    MHAKTDSEVTSLAASSPTRSPRRPVYYVQSPSRDSHDGEKTTTSFHSTPVLSPMGSPPH- 59

Query: 263  XXXXXXXXXXXXXXXXXXXLKPGSRKILPNDGSRG-NRKGQKPWKECDVIXXXXXXXXXX 439
                                      I PND SRG +RKG+KPWKEC VI          
Sbjct: 60   ----------------------SHSSISPNDASRGGHRKGEKPWKECAVIEEEGLLEDEE 97

Query: 440  RHSGFPRRCYFPAXXXXXXXXXXXXXXILYGASRPQKPKISMKSITFEQFVIQAGSDNSG 619
            R  G PRRCYF A              IL+GAS+PQKPKI+MKSITFE+FV+QAGSD++G
Sbjct: 98   RQKGLPRRCYFLAFVVGFFVLFSLFSLILWGASKPQKPKITMKSITFERFVVQAGSDSTG 157

Query: 620  VATDMLSMNSSVKFTFRNTATFFGLHVVPTTIDISYSQLNVATGTVQKFYQSRKSQRTVT 799
            VATDM+SMNS+VK TFRNTATFFG+HV  T +D+SYS+L VA+GT++KFYQSRKS R++T
Sbjct: 158  VATDMVSMNSTVKLTFRNTATFFGVHVTSTPLDLSYSRLRVASGTIKKFYQSRKSHRSLT 217

Query: 800  AVMEGNMIPLYGSGAGLSTSKGIVNNPVPLKLNFMVKARGYVLGKLVKPKFHKTVECSVV 979
             V+ G+ IPLYG GA LSTS G    P+PLKL+FM+++R YVLGKLVKPKF+K +ECSV 
Sbjct: 218  IVLMGDKIPLYGGGASLSTSTGTTTEPLPLKLSFMLRSRAYVLGKLVKPKFYKRIECSVN 277

Query: 980  LDPKTLNVPIPL-KNCTY 1030
            LDPK LNVP+ L K+CTY
Sbjct: 278  LDPKKLNVPLSLKKSCTY 295


>ref|XP_002510197.1| conserved hypothetical protein [Ricinus communis]
            gi|223550898|gb|EEF52384.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 319

 Score =  366 bits (940), Expect = 6e-99
 Identities = 188/318 (59%), Positives = 222/318 (69%), Gaps = 2/318 (0%)
 Frame = +2

Query: 83   MHAKTDSEVTSLAPSSPTRSPRRQVYYVQSPSRDSHDGEKTTTSFHSTPVLXXXXXXXXX 262
            MHAKTDSEVTSLAPSSPTRSPRR VY+VQSPSRDSHDGEKTTTSFHSTPVL         
Sbjct: 1    MHAKTDSEVTSLAPSSPTRSPRRPVYFVQSPSRDSHDGEKTTTSFHSTPVLSPMGSPPHS 60

Query: 263  XXXXXXXXXXXXXXXXXXXLKPGSRKILPNDGSRGN-RKGQKPWKECDVIXXXXXXXXXX 439
                               LKPGSRKI PND S+ + RKGQK WK+C VI          
Sbjct: 61   HSSVGRHSRESSSSRFSGSLKPGSRKISPNDASKSSHRKGQKQWKDCAVIEEEGLLEDEA 120

Query: 440  RHSGFPRRCYFPAXXXXXXXXXXXXXXILYGASRPQKPKISMKSITFEQFVIQAGSDNSG 619
            R  G PRRCYF A              +L+GAS+PQKPKI+MK+I FE F IQAGSD++G
Sbjct: 121  REKGLPRRCYFLAFLLGFFVLFSFFSLVLWGASKPQKPKITMKNIKFEHFSIQAGSDSTG 180

Query: 620  VATDMLSMNSSVKFTFRNTATFFGLHVVPTTIDISYSQLNVATGTVQKFYQSRKSQRTVT 799
            VATDM+S+NS+VK  +RNT TFFG+HV  T +D+ YS++ +A+G V+KFYQSRKSQR+V 
Sbjct: 181  VATDMISINSTVKMIYRNTGTFFGVHVTSTPVDLFYSEITIASGAVKKFYQSRKSQRSVA 240

Query: 800  AVMEGNMIPLYGSGAGLSTSKGIVNNPVPLKLNFMVKARGYVLGKLVKPKFHKTVECSVV 979
              +  N IPLYGSGAG S+S G    PVPLKL+F++++R YVLGKLVKPKF+K +EC   
Sbjct: 241  ISVMSNKIPLYGSGAGFSSSTGTTALPVPLKLSFVLRSRAYVLGKLVKPKFYKRIECDFT 300

Query: 980  LDPKTLNVPIPL-KNCTY 1030
             DPK LNVPI L K+CTY
Sbjct: 301  FDPKKLNVPISLKKSCTY 318


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