BLASTX nr result

ID: Coptis23_contig00013004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00013004
         (1191 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22055.3| unnamed protein product [Vitis vinifera]              343   5e-92
emb|CAN76433.1| hypothetical protein VITISV_033850 [Vitis vinifera]   322   9e-86
ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|2...   247   5e-63
ref|XP_002278254.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anem...   246   8e-63
gb|EEC81533.1| hypothetical protein OsI_24939 [Oryza sativa Indi...   228   2e-57

>emb|CBI22055.3| unnamed protein product [Vitis vinifera]
          Length = 1507

 Score =  343 bits (880), Expect = 5e-92
 Identities = 182/372 (48%), Positives = 246/372 (66%), Gaps = 7/372 (1%)
 Frame = -1

Query: 1095 PNLLGHIEKKNE-----KSIISQSTSSDKKLKRKSSNTSDDGNLKQPTILEVLRRAGAV- 934
            PNL+GH+EKKNE     +S  S +   D+K+ + S ++  DG L+QPTIL+VL++AG   
Sbjct: 854  PNLVGHVEKKNEHKKTYESFSSNNKRKDRKMSKASKDSGIDGKLRQPTILDVLKKAGVTT 913

Query: 933  SQEVPNEGFSDQSCK-RTESQHSDCLADSNGPPSVEISAVTKILDGQRFKFRELSVDCLS 757
            SQ  PN+  S  S K RT         D+N    +E+SAV K+L+ QR KFR L VDC S
Sbjct: 914  SQGTPNDDSSALSPKCRTSESADQHTYDTNKHIILEVSAVFKVLETQRSKFRPLLVDCFS 973

Query: 756  ILTFSRTQDNCSSDPAAEXXXXXXXXXXXXXXLDCLTRQTKQNSVGCLRVPFSNNKVISD 577
            I TFS  QD+C  DPAAE              LD  +  +K  S   L  P   ++V   
Sbjct: 974  IFTFSTNQDSCCPDPAAELPLHLYLLRDIRYKLDFFSPPSKAFSARHLGSPPGLSRVTVS 1033

Query: 576  EFVNKIRKLFPSLKKHFDCAVCVLSEGDEICQEHWKFQSASAGNPDIPGLVVFKSSVAGS 397
            +F+ KI+ LFP+ KKHF+ AV +L EG+E C+EHWK QSASAGNPDIP LV+ +SSV  S
Sbjct: 1034 QFLAKIKPLFPTFKKHFNAAVSILKEGNENCEEHWKVQSASAGNPDIPNLVLSRSSVCTS 1093

Query: 396  VFKEVLSCLSKMLNLPDIKMNTPVLLDLLNAFQPIRIPDSLFSGIQPIPSPGNIDYMYCG 217
            VF E+L C + ML L DI ++ P+L  LL AFQPI++ DS+FSG+QPIP PG I+Y+YCG
Sbjct: 1094 VFNEILHCFNMMLRLADINLDKPILTGLLEAFQPIKMQDSIFSGLQPIPLPGTIEYLYCG 1153

Query: 216  TFSFLEGVLDSACSYSVLLASEVLVTLESIVSSAQSFLDKLLEGSGKSTHLGFVQKVIPL 37
             +SF+E +LD ACS+S +LASE L+TLESIV+S   F DKL+EG+ +ST +G ++ V+P 
Sbjct: 1154 AYSFVEDILDLACSFSFMLASEALLTLESIVTSILKFNDKLMEGNDRSTSMGSIEAVLPT 1213

Query: 36   MQKRLGTYAHQL 1
            ++ RLGT + ++
Sbjct: 1214 LRSRLGTSSRKI 1225


>emb|CAN76433.1| hypothetical protein VITISV_033850 [Vitis vinifera]
          Length = 1201

 Score =  322 bits (826), Expect = 9e-86
 Identities = 176/372 (47%), Positives = 240/372 (64%), Gaps = 7/372 (1%)
 Frame = -1

Query: 1095 PNLLGHIEKKNE-----KSIISQSTSSDKKLKRKSSNTSDDGNLKQPTILEVLRRAGAV- 934
            PNL+GH+EKKNE     +S  S +   D+K+ + S ++  DG L+QPTIL+VL++AG   
Sbjct: 732  PNLVGHVEKKNEHKKTYESFSSNNKRKDRKMSKASKDSGIDGKLRQPTILDVLKKAGVTT 791

Query: 933  SQEVPNEGFSDQSCK-RTESQHSDCLADSNGPPSVEISAVTKILDGQRFKFRELSVDCLS 757
            SQ  PN+  S  S K RT         D+N    +E+SAV K+L+ QR KFR L VDC S
Sbjct: 792  SQGTPNDDSSALSPKCRTSESADQHTYDTNKHIILEVSAVFKVLETQRSKFRPLLVDCFS 851

Query: 756  ILTFSRTQDNCSSDPAAEXXXXXXXXXXXXXXLDCLTRQTKQNSVGCLRVPFSNNKVISD 577
            I TFS      +  P A               LD  +  +K  S   L  P   ++V   
Sbjct: 852  IFTFSTV---FAFTPYANLPLHLYLLRDIRYKLDFFSPPSKAFSARHLGSPPGLSRVTLS 908

Query: 576  EFVNKIRKLFPSLKKHFDCAVCVLSEGDEICQEHWKFQSASAGNPDIPGLVVFKSSVAGS 397
            +F+ KI+ LFP+ KKHF+ AV +L EG+E C+EHWK QSASAGNPDIP LV+ +SSV  S
Sbjct: 909  QFLAKIKPLFPTFKKHFNAAVSILKEGNENCEEHWKVQSASAGNPDIPNLVLSRSSVCTS 968

Query: 396  VFKEVLSCLSKMLNLPDIKMNTPVLLDLLNAFQPIRIPDSLFSGIQPIPSPGNIDYMYCG 217
            VF E+L C + ML L DI ++ P+L  LL AFQPI++ DS+FSG+QPIP PG I+Y+YCG
Sbjct: 969  VFNEILHCFNMMLRLADINLDKPILTGLLEAFQPIKMQDSIFSGLQPIPLPGTIEYLYCG 1028

Query: 216  TFSFLEGVLDSACSYSVLLASEVLVTLESIVSSAQSFLDKLLEGSGKSTHLGFVQKVIPL 37
             +SF+E +LD ACS+S +LASE L+TLESIV+S   F DKL+EG+ +ST +G ++ V+P 
Sbjct: 1029 AYSFVEDILDLACSFSFMLASEALLTLESIVTSILKFNDKLMEGNDRSTSMGSIEAVLPT 1088

Query: 36   MQKRLGTYAHQL 1
            ++ RLGT + ++
Sbjct: 1089 LRSRLGTSSRKI 1100


>ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|222854808|gb|EEE92355.1|
            predicted protein [Populus trichocarpa]
          Length = 1476

 Score =  247 bits (630), Expect = 5e-63
 Identities = 153/363 (42%), Positives = 204/363 (56%), Gaps = 6/363 (1%)
 Frame = -1

Query: 1134 LEEFGSESFNLSKPNLLGHIEKKNEKSIISQSTSSDKKLKRKSSNTSDD--GNLKQPTIL 961
            L+   S +  L+K N   H EK  E        + D K K+ S  +S D  G L+QPTIL
Sbjct: 846  LQVDNSGTLLLNKANNRVHFEKNGE-----HKKTQDNKHKKTSKESSSDPNGKLRQPTIL 900

Query: 960  EVLRRAGAV-SQEVPNEGFSDQSCK-RTESQHSDCLADSNGPPSVEISAVTKILDGQRFK 787
            +VLR+ GAV SQ+V NE  + QS K +T         +S G  S+E+SAV K L+ QRFK
Sbjct: 901  DVLRKKGAVTSQDVSNEESTSQSSKGQTFIPADQDSCNSTGLISLEVSAVAKALEAQRFK 960

Query: 786  FRELSVDCLSILTFSRTQDNCSSDPAAEXXXXXXXXXXXXXXLDCLTRQTKQNSVGCLRV 607
            FR L V C S+L FS  Q +C  DPA E              LD      KQ S  CL  
Sbjct: 961  FRPLHVQCYSLLMFSNNQKSCCLDPAVELPLYLYLLRDLHNKLDYFMPPGKQFSATCLSA 1020

Query: 606  PFSNNKVISDEFVNKIRKLFPSLKKHFDCAVCVLSEGDEICQEHWKFQSASAGNPDIPGL 427
            P    ++   EF++ +R LFP+L++HFD A+ VL EGD  C++HW   SASAGNP++  +
Sbjct: 1021 PAGFTRMTLQEFLSNVRPLFPNLRRHFDNAIFVLKEGDGTCEDHWNVHSASAGNPEVASI 1080

Query: 426  VVFKSSVAGSVFKEVLSCLSKMLNLPDIKMNTPVLLDLLNAFQPIRIPDSLFSGIQPIPS 247
            V  KS V+  VFKEVL   SKMLNL D++M+  VL DLL AFQP  + +++FSG+Q  PS
Sbjct: 1081 VFSKSVVSTLVFKEVLHSFSKMLNLIDVQMHKSVLSDLLEAFQPREVSENVFSGLQHSPS 1140

Query: 246  PGNIDYMYCGTFSFLEGVLDSACSYSVLLA--SEVLVTLESIVSSAQSFLDKLLEGSGKS 73
            PG I+Y+Y G  SF+E  LD      + +A  + V   L ++ S   +   KLL  +  S
Sbjct: 1141 PGTIEYLYLGASSFIEDALDMGIDSILFVAVYNVVKRILPNLRSRLGTSAQKLLSHNWDS 1200

Query: 72   THL 64
             HL
Sbjct: 1201 EHL 1203


>ref|XP_002278254.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group D2 protein-like
            [Vitis vinifera]
          Length = 1069

 Score =  246 bits (628), Expect = 8e-63
 Identities = 133/286 (46%), Positives = 185/286 (64%), Gaps = 1/286 (0%)
 Frame = -1

Query: 855  DSNGPPSVEISAVTKILDGQRFKFRELSVDC-LSILTFSRTQDNCSSDPAAEXXXXXXXX 679
            D+N    +E+SAV K+L+ QR KFR L +   L +L   R + +  S P+          
Sbjct: 638  DTNKHIILEVSAVFKVLETQRSKFRPLLLPLHLYLLRDIRYKLDFFSPPS---------- 687

Query: 678  XXXXXXLDCLTRQTKQNSVGCLRVPFSNNKVISDEFVNKIRKLFPSLKKHFDCAVCVLSE 499
                          K  S   L  P   ++V   +F+ KI+ LFP+ KKHF+ AV +L E
Sbjct: 688  --------------KAFSARHLGSPPGLSRVTVSQFLAKIKPLFPTFKKHFNAAVSILKE 733

Query: 498  GDEICQEHWKFQSASAGNPDIPGLVVFKSSVAGSVFKEVLSCLSKMLNLPDIKMNTPVLL 319
            G+E C+EHWK QSASAGNPDIP LV+ +SSV  SVF E+L C + ML L DI ++ P+L 
Sbjct: 734  GNENCEEHWKVQSASAGNPDIPNLVLSRSSVCTSVFNEILHCFNMMLRLADINLDKPILT 793

Query: 318  DLLNAFQPIRIPDSLFSGIQPIPSPGNIDYMYCGTFSFLEGVLDSACSYSVLLASEVLVT 139
             LL AFQPI++ DS+FSG+QPIP PG I+Y+YCG +SF+E +LD ACS+S +LASE L+T
Sbjct: 794  GLLEAFQPIKMQDSIFSGLQPIPLPGTIEYLYCGAYSFVEDILDLACSFSFMLASEALLT 853

Query: 138  LESIVSSAQSFLDKLLEGSGKSTHLGFVQKVIPLMQKRLGTYAHQL 1
            LESIV+S   F DKL+EG+ +ST +G ++ V+P ++ RLGT + ++
Sbjct: 854  LESIVTSILKFNDKLMEGNDRSTSMGSIEAVLPTLRSRLGTSSRKI 899


>gb|EEC81533.1| hypothetical protein OsI_24939 [Oryza sativa Indica Group]
            gi|222636453|gb|EEE66585.1| hypothetical protein
            OsJ_23134 [Oryza sativa Japonica Group]
          Length = 1489

 Score =  228 bits (581), Expect = 2e-57
 Identities = 141/381 (37%), Positives = 210/381 (55%), Gaps = 10/381 (2%)
 Frame = -1

Query: 1113 SFNLSKPNLLGHIEKKNEKSIISQSTSSDKKLKRKSSNTSDDGNLKQPTILEVLRRAGA- 937
            S + SK NL  ++  +N +  +S       K K  S  ++ D   KQPTIL+  +RAG  
Sbjct: 824  STSTSKFNLPKNMGDQNMEGNVSNKRQKGHKDKASSEKSNSDEKFKQPTILDAFKRAGVT 883

Query: 936  VSQEVPNEGFSDQSCKRTE-SQHSDCLADSNGPPS---VEISAVTKILDGQRFKFRELSV 769
            +SQE   +     S   +  ++H     ++N P     V++ A    LD QRFKFR L  
Sbjct: 884  ISQETNRDSQPSPSGMMSRVTEH-----ETNNPCKFGIVDLMAAPAQLDMQRFKFRTLHA 938

Query: 768  DCLSILTFSRTQDNCSSDPAAEXXXXXXXXXXXXXXLDCLTRQTK---QNSVGCLRVPFS 598
             CLS+L +S  QD   S   +E              LD L   +K    +S G     + 
Sbjct: 939  TCLSLLNYSEPQDTTVSYNESEMPLYVYLLRELQNKLDNLYPSSKPFFSSSQGKSTQAYC 998

Query: 597  NNKVISDEFVNKIRKLFPSLKKHFDCAVCVLSEGDEICQEHWKFQSASAGNPDIPGLVVF 418
               +  +EF+NKI+ LF S++KH D AV ++ +G + C ++W   SASAGNPDIP +VV 
Sbjct: 999  QKSM--EEFLNKIQPLFSSVRKHLDGAVSMIKDGSDSCPDNWNSHSASAGNPDIPYVVVL 1056

Query: 417  KSSVAGSVFKEVLSCLSKMLNLPDI--KMNTPVLLDLLNAFQPIRIPDSLFSGIQPIPSP 244
            KSSVA SVFKEVL C  K+L +PD+  + N  VL +LL  FQP    D + +  +P   P
Sbjct: 1057 KSSVATSVFKEVLGCYRKLLGIPDLLNQANISVLKELLQTFQPSENFDEVLAEFRPSLVP 1116

Query: 243  GNIDYMYCGTFSFLEGVLDSACSYSVLLASEVLVTLESIVSSAQSFLDKLLEGSGKSTHL 64
             N+DY+YCG ++    +LD  CS+S LLA +VL+T++S+++S     +K  E +GK+ H+
Sbjct: 1117 SNLDYLYCGAYTMFAAILDIVCSFSYLLAYDVLITMQSVLNSVIMLFEKSGEQNGKNLHM 1176

Query: 63   GFVQKVIPLMQKRLGTYAHQL 1
            G  +++IP ++K LG  A +L
Sbjct: 1177 GCSKEIIPFLRKHLGLSARKL 1197


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