BLASTX nr result

ID: Coptis23_contig00012991 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012991
         (1854 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282940.1| PREDICTED: probable elongator complex protei...   897   0.0  
ref|XP_002526286.1| nucleotide binding protein, putative [Ricinu...   865   0.0  
emb|CBI26970.3| unnamed protein product [Vitis vinifera]              852   0.0  
ref|XP_003555922.1| PREDICTED: elongator complex protein 2-like ...   850   0.0  
ref|XP_004170294.1| PREDICTED: elongator complex protein 2-like ...   845   0.0  

>ref|XP_002282940.1| PREDICTED: probable elongator complex protein 2-like [Vitis vinifera]
          Length = 839

 Score =  897 bits (2319), Expect = 0.0
 Identities = 431/577 (74%), Positives = 496/577 (85%), Gaps = 2/577 (0%)
 Frame = -2

Query: 1844 SPTNSDMPYRKEGIGLASYIEGPLVIAGSSSYQISLESLLIGHEDWVYSVQWQPPSSLSA 1665
            S +NS   +R+E I LASYIEGP+++AGSSSYQISLESLLIGHEDWVYSV+WQPPS  SA
Sbjct: 262  SQSNSKGTFREEKISLASYIEGPVLVAGSSSYQISLESLLIGHEDWVYSVEWQPPSVTSA 321

Query: 1664 EGSDVYQPYSILSASMDKTMMIWQPEKTTGIWMNVVSVGELSHCALGFYGGHWSPGGDSI 1485
             G   YQP SILSASMDKTMMIWQPE+TTGIWMNVV+VGELSHCALGFYGGHWSP GDSI
Sbjct: 322  NGFAYYQPQSILSASMDKTMMIWQPERTTGIWMNVVTVGELSHCALGFYGGHWSPNGDSI 381

Query: 1484 LAHGYGGSFHLWRNVGVDFDNWQPQKVPSGHYAAVTDITWSRSGDYVLSVSHDQTSRIFA 1305
            LAHGYGGSFHLW+NVG+++DNWQPQKVPSGHYAAVTDI W+RSG+Y+LSVS DQT+RIFA
Sbjct: 382  LAHGYGGSFHLWKNVGIEYDNWQPQKVPSGHYAAVTDIAWARSGEYLLSVSADQTTRIFA 441

Query: 1304 PWKDEVCSEDKYSWHEIARPQVHGHDINCVTIIQGKGNHRFVSGADEKVARVFEAPLSFL 1125
             W++E        WHEIARPQVHGHDINCVTII GKGNHRFVSGADEKVARVFEAPLSFL
Sbjct: 442  SWQNEASFGGSDCWHEIARPQVHGHDINCVTIIHGKGNHRFVSGADEKVARVFEAPLSFL 501

Query: 1124 KTLSHAHFRKFTAPEDLPGEIQILGANMSALGLSQKPIYAQATKEAPQKSANDDLDTLGA 945
            KTL+HA  +K + PED   ++QILGANMSALGLSQKPIY  +T E+P+++ ND LDTL  
Sbjct: 502  KTLNHAISQKSSFPEDFQVDVQILGANMSALGLSQKPIYVHSTHESPERNVNDGLDTLET 561

Query: 944  IPDAVPVVLTEAPIEEQLAINTLWPESHKLYGHGNELFSLCCDHEGKLVASSCKAQSSTV 765
            IPDAVPVVLTE PIEE+LA +TLWPESHKLYGHGNELFSLCCD  GKLVASSCKAQS+ V
Sbjct: 562  IPDAVPVVLTEPPIEEKLAWHTLWPESHKLYGHGNELFSLCCDQGGKLVASSCKAQSAKV 621

Query: 764  AEIWLWLVGSWKAVGRLQSHNLTVTNMQFSYDNTLLLAVSRDRQFSLFSIDTTGVDEVTY 585
            AEIWLW VGSWKAVGRLQSH+LTVT ++FS+D+ LLL+VSRDRQFS+F+I  TGVDEV++
Sbjct: 622  AEIWLWQVGSWKAVGRLQSHSLTVTQIEFSHDDNLLLSVSRDRQFSVFAIKRTGVDEVSH 681

Query: 584  ELVARQEAHKRIIWTCSWNPFGHEFATGSRDKTVKIWAVQNRSSVKLLITLPQFTSSVTA 405
            +L+ARQEAHKRIIW CSWNPFGHEFATGSRDKTVKIWAV   SSVK L+TLPQFTSSVTA
Sbjct: 682  QLIARQEAHKRIIWACSWNPFGHEFATGSRDKTVKIWAVDKGSSVKQLMTLPQFTSSVTA 741

Query: 404  LCWYGRNSSSDKGFLAVGMESGLIEVWSLS-RRNINDSVELLEYQAALSVRFDPFICHVS 228
            L W+  +   + GFLAVGMESGL+E+WSLS  R ++ S+ +    AAL  R DPF+CHVS
Sbjct: 742  LSWFALDHQRNDGFLAVGMESGLVELWSLSVTRTVDGSMTVPGVTAALVRRLDPFMCHVS 801

Query: 227  TVHRLAWKHTD-NEDCRTAQLVSCGADHCVRVFDVDV 120
            +V RLAW+ ++ + DC++  L SCGADHCVR+F+V+V
Sbjct: 802  SVQRLAWRKSEASGDCKSVLLASCGADHCVRIFEVNV 838


>ref|XP_002526286.1| nucleotide binding protein, putative [Ricinus communis]
            gi|223534367|gb|EEF36075.1| nucleotide binding protein,
            putative [Ricinus communis]
          Length = 846

 Score =  865 bits (2235), Expect = 0.0
 Identities = 409/580 (70%), Positives = 489/580 (84%), Gaps = 2/580 (0%)
 Frame = -2

Query: 1853 LRRSPTNSDMPYRKEGIGLASYIEGPLVIAGSSSYQISLESLLIGHEDWVYSVQWQPPSS 1674
            LR S  NS+  YRKE I LASYIEGP+++AGSSSYQISLESLLIGHEDWVYSV+WQPPS+
Sbjct: 266  LRGSLANSEGTYRKEEISLASYIEGPVIVAGSSSYQISLESLLIGHEDWVYSVEWQPPST 325

Query: 1673 LSAEGSDVYQPYSILSASMDKTMMIWQPEKTTGIWMNVVSVGELSHCALGFYGGHWSPGG 1494
              AEG+  +QP SILSASMDKTMMIWQPE+ +GIWMNVV+VGELSH ALGFYGGHWS  G
Sbjct: 326  TLAEGTIYHQPQSILSASMDKTMMIWQPERKSGIWMNVVTVGELSHSALGFYGGHWSSDG 385

Query: 1493 DSILAHGYGGSFHLWRNVGVDFDNWQPQKVPSGHYAAVTDITWSRSGDYVLSVSHDQTSR 1314
             SILAHG+GG+FH+W+N+GV  DNWQPQKVP+GH+A VTDI+W++SG+Y+LSVSHDQT+R
Sbjct: 386  LSILAHGFGGAFHMWKNIGVGMDNWQPQKVPTGHFAPVTDISWAKSGEYILSVSHDQTTR 445

Query: 1313 IFAPWKDEVCSEDKYSWHEIARPQVHGHDINCVTIIQGKGNHRFVSGADEKVARVFEAPL 1134
            IFAPW +E    +  SWHEIARPQVHGHDINCV+I+QGKGNHRFVSGADEKVARVFEA L
Sbjct: 446  IFAPWINETSPHNGESWHEIARPQVHGHDINCVSIVQGKGNHRFVSGADEKVARVFEASL 505

Query: 1133 SFLKTLSHAHFRKFTAPEDLPGEIQILGANMSALGLSQKPIYAQATKEAPQKSANDDLDT 954
            SFLKTL+HA F+    P  L  ++QILGANMSALGLSQKPIY  + +E   ++ ND LDT
Sbjct: 506  SFLKTLNHATFQNSNFPVGLQVDVQILGANMSALGLSQKPIYVHSVRETTDRNGNDGLDT 565

Query: 953  LGAIPDAVPVVLTEAPIEEQLAINTLWPESHKLYGHGNELFSLCCDHEGKLVASSCKAQS 774
            L ++PDAVPVV  E PIE+QLA +TLWPESHKLYGHGNELFSLCCD EGKLVASSCKAQ+
Sbjct: 566  LESVPDAVPVVFIEPPIEDQLAYHTLWPESHKLYGHGNELFSLCCDREGKLVASSCKAQT 625

Query: 773  STVAEIWLWLVGSWKAVGRLQSHNLTVTNMQFSYDNTLLLAVSRDRQFSLFSIDTTGVDE 594
            + VAEIWLW VGSWKAVG LQSH+LTVT M+FS+D+++LL VSRDRQFS+F+I  TG DE
Sbjct: 626  AAVAEIWLWQVGSWKAVGSLQSHSLTVTQMEFSHDDSMLLTVSRDRQFSVFTIKRTGNDE 685

Query: 593  VTYELVARQEAHKRIIWTCSWNPFGHEFATGSRDKTVKIWAVQNRSSVKLLITLPQFTSS 414
            ++YEL+ARQEAHKRIIW+CSWNPFGHEFATGSRDKTVKIWA++N S VK ++TLPQF SS
Sbjct: 686  ISYELLARQEAHKRIIWSCSWNPFGHEFATGSRDKTVKIWAIENESCVKQMMTLPQFNSS 745

Query: 413  VTALCWYGRNSSSDKGFLAVGMESGLIEVWSLS-RRNINDSVELLEYQAALSVRFDPFIC 237
            VTAL W G +   + G LA+GME+GLIE+WSL+ +R+ + S+ +    A L++R DP +C
Sbjct: 746  VTALSWVGVDRQRNHGLLAIGMENGLIELWSLTVKRSEDGSIAVPGVAATLTIRLDPSMC 805

Query: 236  HVSTVHRLAWK-HTDNEDCRTAQLVSCGADHCVRVFDVDV 120
            HVSTV+R++W+ H  +EDC+   L SCGAD CVR+F+V V
Sbjct: 806  HVSTVNRMSWRNHEKSEDCKNMLLASCGADQCVRLFEVIV 845


>emb|CBI26970.3| unnamed protein product [Vitis vinifera]
          Length = 801

 Score =  852 bits (2200), Expect = 0.0
 Identities = 414/575 (72%), Positives = 469/575 (81%)
 Frame = -2

Query: 1844 SPTNSDMPYRKEGIGLASYIEGPLVIAGSSSYQISLESLLIGHEDWVYSVQWQPPSSLSA 1665
            S +NS   +R+E I LASYIEGP+++AGSSSYQISLESLLIGHEDWVYSV+WQPPS  SA
Sbjct: 262  SQSNSKGTFREEKISLASYIEGPVLVAGSSSYQISLESLLIGHEDWVYSVEWQPPSVTSA 321

Query: 1664 EGSDVYQPYSILSASMDKTMMIWQPEKTTGIWMNVVSVGELSHCALGFYGGHWSPGGDSI 1485
             G   YQP SILSASMDKTMMIWQPE+TTGIWMNVV+VGELSHCALGFYGGHWSP GDSI
Sbjct: 322  NGFAYYQPQSILSASMDKTMMIWQPERTTGIWMNVVTVGELSHCALGFYGGHWSPNGDSI 381

Query: 1484 LAHGYGGSFHLWRNVGVDFDNWQPQKVPSGHYAAVTDITWSRSGDYVLSVSHDQTSRIFA 1305
            LAHGYGGSFHLW+NVG+++DNWQPQKVPSGHYAAVTDI W+RSG+Y+LSVS DQT+RIFA
Sbjct: 382  LAHGYGGSFHLWKNVGIEYDNWQPQKVPSGHYAAVTDIAWARSGEYLLSVSADQTTRIFA 441

Query: 1304 PWKDEVCSEDKYSWHEIARPQVHGHDINCVTIIQGKGNHRFVSGADEKVARVFEAPLSFL 1125
             W++E        WHEIARPQVHGHDINCVTII GKGNHRFVSGADEKVARVFEAPLSFL
Sbjct: 442  SWQNEASFGGSDCWHEIARPQVHGHDINCVTIIHGKGNHRFVSGADEKVARVFEAPLSFL 501

Query: 1124 KTLSHAHFRKFTAPEDLPGEIQILGANMSALGLSQKPIYAQATKEAPQKSANDDLDTLGA 945
            KTL+HA  +K + PED   ++QILGANMSALGLSQKPIY  +T E+P+++ ND LDTL  
Sbjct: 502  KTLNHAISQKSSFPEDFQVDVQILGANMSALGLSQKPIYVHSTHESPERNVNDGLDTLET 561

Query: 944  IPDAVPVVLTEAPIEEQLAINTLWPESHKLYGHGNELFSLCCDHEGKLVASSCKAQSSTV 765
            IPDAVPVVLTE PIEE+LA +TLWPESHKLYGHGNELFSLCCD  GKLVASSCKAQS+ V
Sbjct: 562  IPDAVPVVLTEPPIEEKLAWHTLWPESHKLYGHGNELFSLCCDQGGKLVASSCKAQSAKV 621

Query: 764  AEIWLWLVGSWKAVGRLQSHNLTVTNMQFSYDNTLLLAVSRDRQFSLFSIDTTGVDEVTY 585
            AEIWLW VGSWKAVGRLQSH+LTVT ++FS+D+ LLL+VSRDRQFS+F+I  TGVDEV++
Sbjct: 622  AEIWLWQVGSWKAVGRLQSHSLTVTQIEFSHDDNLLLSVSRDRQFSVFAIKRTGVDEVSH 681

Query: 584  ELVARQEAHKRIIWTCSWNPFGHEFATGSRDKTVKIWAVQNRSSVKLLITLPQFTSSVTA 405
            +L+ARQEAHKRIIW CSWNPFGHEFATGSRDKTVKIWAV   SSVK L+TLPQFTSSVTA
Sbjct: 682  QLIARQEAHKRIIWACSWNPFGHEFATGSRDKTVKIWAVDKGSSVKQLMTLPQFTSSVTA 741

Query: 404  LCWYGRNSSSDKGFLAVGMESGLIEVWSLSRRNINDSVELLEYQAALSVRFDPFICHVST 225
            L W+  +   + GFLAVGMESGL+E+WSLS     D                        
Sbjct: 742  LSWFALDHQRNDGFLAVGMESGLVELWSLSVTRTVD------------------------ 777

Query: 224  VHRLAWKHTDNEDCRTAQLVSCGADHCVRVFDVDV 120
                        DC++  L SCGADHCVR+F+V+V
Sbjct: 778  ------------DCKSVLLASCGADHCVRIFEVNV 800


>ref|XP_003555922.1| PREDICTED: elongator complex protein 2-like [Glycine max]
          Length = 832

 Score =  850 bits (2197), Expect = 0.0
 Identities = 413/581 (71%), Positives = 480/581 (82%), Gaps = 2/581 (0%)
 Frame = -2

Query: 1853 LRRSPTNSDMPYRKEGIGLASYIEGPLVIAGSSSYQISLESLLIGHEDWVYSVQWQPPSS 1674
            LR S +N     RK  I L+SYIEGP+++AGSSS+Q+SLESLLIGHEDWVYSV WQPP  
Sbjct: 257  LRSSMSNGHGIDRKGEISLSSYIEGPVLVAGSSSFQVSLESLLIGHEDWVYSVMWQPPLV 316

Query: 1673 LSAEGSDVYQPYSILSASMDKTMMIWQPEKTTGIWMNVVSVGELSHCALGFYGGHWSPGG 1494
               E    YQP SILSASMDKTMMIWQPEKT+G+WMNVV+VGELSHCALGFYGGHWSP G
Sbjct: 317  APMEEDAYYQPQSILSASMDKTMMIWQPEKTSGVWMNVVTVGELSHCALGFYGGHWSPNG 376

Query: 1493 DSILAHGYGGSFHLWRNVGVDFDNWQPQKVPSGHYAAVTDITWSRSGDYVLSVSHDQTSR 1314
            DSILAHGYGGSFHLW+NVG D  NW PQKVPSGH+A+VTDI W+RSGDY++SVSHDQT+R
Sbjct: 377  DSILAHGYGGSFHLWKNVGND--NWLPQKVPSGHFASVTDIAWARSGDYIMSVSHDQTTR 434

Query: 1313 IFAPWKDEVCSEDKYSWHEIARPQVHGHDINCVTIIQGKGNHRFVSGADEKVARVFEAPL 1134
            I+APWK E   +D   WHEIARPQVHGHDINC+ +I  KGNHRF+ GA+EKVARVFEAPL
Sbjct: 435  IYAPWKVEASLQDGEFWHEIARPQVHGHDINCMAVIHSKGNHRFLCGAEEKVARVFEAPL 494

Query: 1133 SFLKTLSHAHFRKFTAPEDLPGEIQILGANMSALGLSQKPIYAQATKEAPQKSANDDLDT 954
            SFLKTL++A  +K  + +D+ G++QILGANMSALGLSQKPIYAQA  EAP++S  D LDT
Sbjct: 495  SFLKTLNNATLQKSCSSDDIMGDVQILGANMSALGLSQKPIYAQAVHEAPKRSGIDGLDT 554

Query: 953  LGAIPDAVPVVLTEAPIEEQLAINTLWPESHKLYGHGNELFSLCCDHEGKLVASSCKAQS 774
            +  IPDAVP V TE PIE+QLA +TLWPESHKLYGHGNELFSLCCDH+G+LVASSCKAQS
Sbjct: 555  IETIPDAVPTVFTEPPIEDQLAWHTLWPESHKLYGHGNELFSLCCDHKGELVASSCKAQS 614

Query: 773  STVAEIWLWLVGSWKAVGRLQSHNLTVTNMQFSYDNTLLLAVSRDRQFSLFSIDTTGVDE 594
            + VAE+WLW VGSWKAVGRLQSH+LTVT M+FS+D+  LL VSRDRQFS+FSI  TG  E
Sbjct: 615  AAVAEVWLWQVGSWKAVGRLQSHSLTVTQMEFSHDDNFLLTVSRDRQFSVFSITRTGTGE 674

Query: 593  VTYELVARQEAHKRIIWTCSWNPFGHEFATGSRDKTVKIWAVQNRSSVKLLITLPQFTSS 414
            ++Y L+ RQE HKRIIW+CSWNP GHEFATGSRDKTVKIWA++ R SVK L++LPQFTSS
Sbjct: 675  ISYSLLVRQEGHKRIIWSCSWNPHGHEFATGSRDKTVKIWAIE-RESVKQLMSLPQFTSS 733

Query: 413  VTALCWYGRNSSSDKGFLAVGMESGLIEVWSLSRRNIND-SVELLEYQAALSVRFDPFIC 237
            VTAL W G +   + G LAVGME+G IE+W+LS    +D S+      A+L+VR DPFIC
Sbjct: 734  VTALSWVGLHHRKNNGLLAVGMENGQIELWNLSYNRADDGSIAAPGLAASLAVRIDPFIC 793

Query: 236  HVSTVHRLAWKHTDNEDCRTA-QLVSCGADHCVRVFDVDVK 117
            H STV+RLAWK   NED +T+ QL SCGAD+CVRVFDV V+
Sbjct: 794  HASTVNRLAWK--KNEDDQTSMQLASCGADNCVRVFDVSVE 832


>ref|XP_004170294.1| PREDICTED: elongator complex protein 2-like [Cucumis sativus]
          Length = 837

 Score =  845 bits (2184), Expect = 0.0
 Identities = 408/568 (71%), Positives = 476/568 (83%), Gaps = 2/568 (0%)
 Frame = -2

Query: 1817 RKEGIGLASYIEGPLVIAGSSSYQISLESLLIGHEDWVYSVQWQPPSSLSAEGSDVYQPY 1638
            +KE I L SYI+GP+  AG  +YQ+SLESLLIGHEDWVYSVQWQPPS+   EG   YQ  
Sbjct: 273  KKEEISLTSYIQGPIFTAGPLTYQVSLESLLIGHEDWVYSVQWQPPSASETEGIP-YQSE 331

Query: 1637 SILSASMDKTMMIWQPEKTTGIWMNVVSVGELSHCALGFYGGHWSPGGDSILAHGYGGSF 1458
            SILSASMDKTMMIW+PEKT+GIWMNVV+VGELSHCALGFYGGHWSP GDSILAHGYGGSF
Sbjct: 332  SILSASMDKTMMIWKPEKTSGIWMNVVTVGELSHCALGFYGGHWSPNGDSILAHGYGGSF 391

Query: 1457 HLWRNVGVDFDNWQPQKVPSGHYAAVTDITWSRSGDYVLSVSHDQTSRIFAPWKDEVCSE 1278
            HLWRNVG   DNW+P KVPSGH+AAV DI+W+RSGDY++SVSHDQT+RIF+PWK  V S 
Sbjct: 392  HLWRNVGTSSDNWKPHKVPSGHFAAVMDISWARSGDYIISVSHDQTTRIFSPWKS-VNSL 450

Query: 1277 DKYSWHEIARPQVHGHDINCVTIIQGKGNHRFVSGADEKVARVFEAPLSFLKTLSHAHFR 1098
            +  SWHEIARPQVHGHDINCVTIIQGKGNHRFVSGA+EKVARVFEAPLSFLKTLSHA   
Sbjct: 451  EGGSWHEIARPQVHGHDINCVTIIQGKGNHRFVSGAEEKVARVFEAPLSFLKTLSHATLT 510

Query: 1097 KFTAPEDLPGEIQILGANMSALGLSQKPIYAQATKEAPQKSANDDLDTLGAIPDAVPVVL 918
               A ED   ++QILGANMSALGLSQKPIY  +  + P +S N+ +DTL  IPDAVPV+L
Sbjct: 511  NVVANEDHLVDVQILGANMSALGLSQKPIYVHSADKTPDRSGNEGIDTLETIPDAVPVIL 570

Query: 917  TEAPIEEQLAINTLWPESHKLYGHGNELFSLCCDHEGKLVASSCKAQSSTVAEIWLWLVG 738
            TE PIE+QLA +TLWPESHKLYGHGNELFSLCCD++GKLVASSCKAQ+++VAEIWLW VG
Sbjct: 571  TEPPIEDQLAWHTLWPESHKLYGHGNELFSLCCDNKGKLVASSCKAQTASVAEIWLWEVG 630

Query: 737  SWKAVGRLQSHNLTVTNMQFSYDNTLLLAVSRDRQFSLFSIDTTGVDEVTYELVARQEAH 558
            SWKAVGRLQSH+LT+T M+FS D+++LLAVSRDRQFS+F I  TG DE+ +EL++RQEAH
Sbjct: 631  SWKAVGRLQSHSLTITQMEFSNDDSMLLAVSRDRQFSVFKIHRTGSDEIHHELISRQEAH 690

Query: 557  KRIIWTCSWNPFGHEFATGSRDKTVKIWAVQNRSSVKLLITLPQFTSSVTALCWYGRNSS 378
            +RIIW+CSWNP GHEFATGSRDKTVKIWAV   SSVK L TL QF SSVTAL W G +S 
Sbjct: 691  RRIIWSCSWNPHGHEFATGSRDKTVKIWAVTPESSVKQLTTLSQFKSSVTALSWVGLDSK 750

Query: 377  SDKGFLAVGMESGLIEVWSLSRRNINDSVELLEYQAALSVRFDPFICHVSTVHRLAWKHT 198
            S+ GFLA+GME+GL+E+W+LS +  ++        A++++R DPF+CHVS+V+RLAWK  
Sbjct: 751  SN-GFLAIGMENGLLELWNLSIKRTDNIYS--NVVASVAIRLDPFVCHVSSVNRLAWKKP 807

Query: 197  D--NEDCRTAQLVSCGADHCVRVFDVDV 120
            +   E+CR  Q  SCG DHCVRVF+V+V
Sbjct: 808  EKSGEECRKLQFASCGTDHCVRVFEVNV 835


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