BLASTX nr result

ID: Coptis23_contig00012975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012975
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516212.1| conserved hypothetical protein [Ricinus comm...   229   2e-58
ref|XP_002277493.2| PREDICTED: uncharacterized protein LOC100249...   226   2e-57
emb|CBI27757.3| unnamed protein product [Vitis vinifera]              226   2e-57
ref|XP_002326145.1| predicted protein [Populus trichocarpa] gi|2...   216   2e-54
ref|XP_004162301.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   214   4e-54

>ref|XP_002516212.1| conserved hypothetical protein [Ricinus communis]
           gi|223544698|gb|EEF46214.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1731

 Score =  229 bits (584), Expect = 2e-58
 Identities = 110/137 (80%), Positives = 125/137 (91%)
 Frame = +2

Query: 2   AIQFINKARPWNTLMAVGWGNGANMLTKYLAEVEERTPLTAATCIDNPFDLEEATRSFPY 181
           AI FINKARPW TLM VGWG GANMLTKYLAEV +RTPLTAATCI+NPFDLEE T+S PY
Sbjct: 257 AIHFINKARPWTTLMGVGWGYGANMLTKYLAEVGDRTPLTAATCINNPFDLEEVTKSSPY 316

Query: 182 HVAVDQKLTSGLIDILRSSKELFQGRAKGFNVEKALSATSLRDFEREISMVAYGFKTIED 361
           H+A+DQKLT GLIDIL+S+KELFQGR KGF+VEKALSA S+RDFE+ ISM++YGF+ IED
Sbjct: 317 HIALDQKLTGGLIDILQSNKELFQGREKGFDVEKALSAKSVRDFEKAISMISYGFEEIED 376

Query: 362 FYSKSSTRELVGNVKIP 412
           FYSKSSTR++VGNVKIP
Sbjct: 377 FYSKSSTRDVVGNVKIP 393


>ref|XP_002277493.2| PREDICTED: uncharacterized protein LOC100249222 [Vitis vinifera]
          Length = 1747

 Score =  226 bits (575), Expect = 2e-57
 Identities = 110/137 (80%), Positives = 122/137 (89%)
 Frame = +2

Query: 2   AIQFINKARPWNTLMAVGWGNGANMLTKYLAEVEERTPLTAATCIDNPFDLEEATRSFPY 181
           AIQFIN+ARPW T+M VGWG GANMLTKYLAEV E+TPLTAATCIDNPFDLEEA+R  P 
Sbjct: 217 AIQFINRARPWTTMMGVGWGYGANMLTKYLAEVGEKTPLTAATCIDNPFDLEEASRVAPN 276

Query: 182 HVAVDQKLTSGLIDILRSSKELFQGRAKGFNVEKALSATSLRDFEREISMVAYGFKTIED 361
           H+ VDQKLT GLIDILRS+KELFQGR KGF+VEKALSA ++RDFE+ ISMV+YGF  IED
Sbjct: 277 HIVVDQKLTGGLIDILRSNKELFQGRTKGFDVEKALSAKTVRDFEKAISMVSYGFDAIED 336

Query: 362 FYSKSSTRELVGNVKIP 412
           FYSKSSTR +VGNVKIP
Sbjct: 337 FYSKSSTRGIVGNVKIP 353


>emb|CBI27757.3| unnamed protein product [Vitis vinifera]
          Length = 1544

 Score =  226 bits (575), Expect = 2e-57
 Identities = 110/137 (80%), Positives = 122/137 (89%)
 Frame = +2

Query: 2   AIQFINKARPWNTLMAVGWGNGANMLTKYLAEVEERTPLTAATCIDNPFDLEEATRSFPY 181
           AIQFIN+ARPW T+M VGWG GANMLTKYLAEV E+TPLTAATCIDNPFDLEEA+R  P 
Sbjct: 86  AIQFINRARPWTTMMGVGWGYGANMLTKYLAEVGEKTPLTAATCIDNPFDLEEASRVAPN 145

Query: 182 HVAVDQKLTSGLIDILRSSKELFQGRAKGFNVEKALSATSLRDFEREISMVAYGFKTIED 361
           H+ VDQKLT GLIDILRS+KELFQGR KGF+VEKALSA ++RDFE+ ISMV+YGF  IED
Sbjct: 146 HIVVDQKLTGGLIDILRSNKELFQGRTKGFDVEKALSAKTVRDFEKAISMVSYGFDAIED 205

Query: 362 FYSKSSTRELVGNVKIP 412
           FYSKSSTR +VGNVKIP
Sbjct: 206 FYSKSSTRGIVGNVKIP 222


>ref|XP_002326145.1| predicted protein [Populus trichocarpa] gi|222833338|gb|EEE71815.1|
           predicted protein [Populus trichocarpa]
          Length = 1852

 Score =  216 bits (549), Expect = 2e-54
 Identities = 110/146 (75%), Positives = 123/146 (84%), Gaps = 9/146 (6%)
 Frame = +2

Query: 2   AIQFINKARPWNTLMAVGWGNGANMLTKYLAEVEERTPLTAATCIDNPFDLEEATRSFPY 181
           AIQFI+KARPW TLM VGWG GANMLTKYLAEV E TPLTAATCI+NPFDLEEATR  PY
Sbjct: 249 AIQFISKARPWTTLMGVGWGYGANMLTKYLAEVGECTPLTAATCINNPFDLEEATRCSPY 308

Query: 182 HVAVDQKLTSGLIDILRSSK---------ELFQGRAKGFNVEKALSATSLRDFEREISMV 334
           HVA+DQKLT GLIDIL+S+K         E+FQGRAKGF+VE AL + S+RDFE+ ISMV
Sbjct: 309 HVALDQKLTGGLIDILQSNKNANGLHPSSEIFQGRAKGFDVENALVSKSVRDFEKAISMV 368

Query: 335 AYGFKTIEDFYSKSSTRELVGNVKIP 412
           +YGF+ IEDFYSKSSTR +VGNVKIP
Sbjct: 369 SYGFEEIEDFYSKSSTRGMVGNVKIP 394


>ref|XP_004162301.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229461 [Cucumis sativus]
          Length = 1766

 Score =  214 bits (546), Expect = 4e-54
 Identities = 102/137 (74%), Positives = 121/137 (88%)
 Frame = +2

Query: 2   AIQFINKARPWNTLMAVGWGNGANMLTKYLAEVEERTPLTAATCIDNPFDLEEATRSFPY 181
           A+QF++KARPW  LMA+GWG GANMLTKYLAEV ERTPLTAA CIDNPFDLEEAT++ PY
Sbjct: 267 AVQFVSKARPWTALMAIGWGYGANMLTKYLAEVGERTPLTAAACIDNPFDLEEATQTPPY 326

Query: 182 HVAVDQKLTSGLIDILRSSKELFQGRAKGFNVEKALSATSLRDFEREISMVAYGFKTIED 361
           H+A+D  LT GLI+ILRS+KELFQG+AKGF++EKAL A S+RDFE+ IS V++GF +IED
Sbjct: 327 HMAIDHDLTGGLINILRSNKELFQGKAKGFDIEKALEAKSVRDFEKLISSVSHGFNSIED 386

Query: 362 FYSKSSTRELVGNVKIP 412
           FYSKSST  +VGNVKIP
Sbjct: 387 FYSKSSTGSVVGNVKIP 403


Top