BLASTX nr result

ID: Coptis23_contig00012957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012957
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD32500.1| protein kinase Ck2 regulatory subunit 2 [Nicotia...   183   2e-44
ref|XP_002526485.1| casein kinase II beta chain, putative [Ricin...   182   4e-44
ref|XP_002327022.1| predicted protein [Populus trichocarpa] gi|2...   182   4e-44
ref|XP_002301241.1| predicted protein [Populus trichocarpa] gi|2...   180   1e-43
gb|ABK96581.1| unknown [Populus trichocarpa x Populus deltoides]      180   1e-43

>emb|CAD32500.1| protein kinase Ck2 regulatory subunit 2 [Nicotiana tabacum]
          Length = 280

 Score =  183 bits (464), Expect = 2e-44
 Identities = 84/85 (98%), Positives = 85/85 (100%)
 Frame = +2

Query: 296 GDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMLDKYKNYDFGRCPRVYCCGQPCL 475
           GDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAML+KYKNYDFGRCPRVYCCGQPCL
Sbjct: 146 GDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMLEKYKNYDFGRCPRVYCCGQPCL 205

Query: 476 PVGQSDIPRSSTVKIYCPKCEDIYY 550
           PVGQSDIPRSSTVKIYCPKCEDIYY
Sbjct: 206 PVGQSDIPRSSTVKIYCPKCEDIYY 230



 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 33/33 (100%), Positives = 33/33 (100%)
 Frame = +3

Query: 75  WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSS 173
           WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSS
Sbjct: 94  WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSS 126


>ref|XP_002526485.1| casein kinase II beta chain, putative [Ricinus communis]
           gi|223534160|gb|EEF35876.1| casein kinase II beta chain,
           putative [Ricinus communis]
          Length = 338

 Score =  182 bits (461), Expect = 4e-44
 Identities = 83/85 (97%), Positives = 85/85 (100%)
 Frame = +2

Query: 296 GDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMLDKYKNYDFGRCPRVYCCGQPCL 475
           GDMFTEEQNELVESAAEMLYGLIHVRYILTSKGM+AML+KYKNYDFGRCPRVYCCGQPCL
Sbjct: 146 GDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMSAMLEKYKNYDFGRCPRVYCCGQPCL 205

Query: 476 PVGQSDIPRSSTVKIYCPKCEDIYY 550
           PVGQSDIPRSSTVKIYCPKCEDIYY
Sbjct: 206 PVGQSDIPRSSTVKIYCPKCEDIYY 230



 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 33/33 (100%), Positives = 33/33 (100%)
 Frame = +3

Query: 75  WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSS 173
           WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSS
Sbjct: 94  WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSS 126


>ref|XP_002327022.1| predicted protein [Populus trichocarpa] gi|222835337|gb|EEE73772.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  182 bits (461), Expect = 4e-44
 Identities = 83/85 (97%), Positives = 85/85 (100%)
 Frame = +2

Query: 296 GDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMLDKYKNYDFGRCPRVYCCGQPCL 475
           GDMFTEEQNELVESAAEMLYGLIHVRYILTSKGM+AML+KYKNYDFGRCPRVYCCGQPCL
Sbjct: 166 GDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMSAMLEKYKNYDFGRCPRVYCCGQPCL 225

Query: 476 PVGQSDIPRSSTVKIYCPKCEDIYY 550
           PVGQSDIPRSSTVKIYCPKCEDIYY
Sbjct: 226 PVGQSDIPRSSTVKIYCPKCEDIYY 250



 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 33/33 (100%), Positives = 33/33 (100%)
 Frame = +3

Query: 75  WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSS 173
           WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSS
Sbjct: 114 WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSS 146


>ref|XP_002301241.1| predicted protein [Populus trichocarpa] gi|222842967|gb|EEE80514.1|
           predicted protein [Populus trichocarpa]
          Length = 301

 Score =  180 bits (457), Expect = 1e-43
 Identities = 82/85 (96%), Positives = 84/85 (98%)
 Frame = +2

Query: 296 GDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMLDKYKNYDFGRCPRVYCCGQPCL 475
           GDMFTEEQNELVESAAEMLYGLIHVRYILTSKGM+AML+KYKNYDFGRCPRVYCCGQPC 
Sbjct: 167 GDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMSAMLEKYKNYDFGRCPRVYCCGQPCF 226

Query: 476 PVGQSDIPRSSTVKIYCPKCEDIYY 550
           PVGQSDIPRSSTVKIYCPKCEDIYY
Sbjct: 227 PVGQSDIPRSSTVKIYCPKCEDIYY 251



 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 33/33 (100%), Positives = 33/33 (100%)
 Frame = +3

Query: 75  WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSS 173
           WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSS
Sbjct: 115 WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSS 147


>gb|ABK96581.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 330

 Score =  180 bits (457), Expect = 1e-43
 Identities = 82/85 (96%), Positives = 84/85 (98%)
 Frame = +2

Query: 296 GDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMLDKYKNYDFGRCPRVYCCGQPCL 475
           GDMFTEEQNELVESAAEMLYGLIHVRYILTSKGM+AML+KYKNYDFGRCPRVYCCGQPC 
Sbjct: 167 GDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMSAMLEKYKNYDFGRCPRVYCCGQPCF 226

Query: 476 PVGQSDIPRSSTVKIYCPKCEDIYY 550
           PVGQSDIPRSSTVKIYCPKCEDIYY
Sbjct: 227 PVGQSDIPRSSTVKIYCPKCEDIYY 251



 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 33/33 (100%), Positives = 33/33 (100%)
 Frame = +3

Query: 75  WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSS 173
           WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSS
Sbjct: 115 WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSS 147


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