BLASTX nr result

ID: Coptis23_contig00012946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012946
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532208.1| conserved hypothetical protein [Ricinus comm...    57   2e-06

>ref|XP_002532208.1| conserved hypothetical protein [Ricinus communis]
           gi|223528104|gb|EEF30177.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 368

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 36/92 (39%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
 Frame = +1

Query: 1   GIPWMITEKK-------LRLGGLGQKIEDLTLLSERHPWDSSLEVGEKVKVASRGTELYN 159
           G PW IT K        + LG L  K ++              + G+ +KV   G+E Y 
Sbjct: 282 GRPWAITAKLSGHDTYLVALGNLMPKYQEKLDFRNN-------DTGKDLKVVCSGSEEYK 334

Query: 160 RGKQLKTLFLEFADHLRGLHQKFASEECKILQ 255
            GKQL+ LFLEFA+H R LH++ A EE KI Q
Sbjct: 335 TGKQLRDLFLEFAEHQRRLHKRLALEERKIFQ 366


Top