BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012943
         (769 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
emb|CBI39592.3| unnamed protein product [Vitis vinifera]               72   1e-10
ref|XP_002892528.1| pentatricopeptide repeat-containing protein ...    68   2e-09
ref|NP_172453.1| pentatricopeptide repeat-containing protein [Ar...    67   3e-09
ref|XP_002512435.1| pentatricopeptide repeat-containing protein,...    67   6e-09

>ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 30/38 (78%), Positives = 36/38 (94%)
 Frame = -2

Query: 768 LLNEMLEKGLVPNRITYDVIRDEMVERGFVSDIDGHLY 655
           LLNEMLEKGL+PNR TYD++RDEM+E+GF+ DIDGHLY
Sbjct: 566 LLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHLY 603


>emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 30/38 (78%), Positives = 36/38 (94%)
 Frame = -2

Query: 768 LLNEMLEKGLVPNRITYDVIRDEMVERGFVSDIDGHLY 655
           LLNEMLEKGL+PNR TYD++RDEM+E+GF+ DIDGHLY
Sbjct: 534 LLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHLY 571


>ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338370|gb|EFH68787.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 606

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 28/38 (73%), Positives = 37/38 (97%)
 Frame = -2

Query: 768 LLNEMLEKGLVPNRITYDVIRDEMVERGFVSDIDGHLY 655
           LLNEMLEKGLVPNRITY+++++EMV++GFV DI+GHL+
Sbjct: 563 LLNEMLEKGLVPNRITYEIVKEEMVDKGFVPDIEGHLF 600


>ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75276860|sp|O04504.1|PPR27_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g09820 gi|2160173|gb|AAB60736.1| Similar to N.
           tabacum salt-inducible protein (gb|U08285) [Arabidopsis
           thaliana] gi|332190378|gb|AEE28499.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 28/38 (73%), Positives = 37/38 (97%)
 Frame = -2

Query: 768 LLNEMLEKGLVPNRITYDVIRDEMVERGFVSDIDGHLY 655
           LLNEMLEKGLVPNRITY+++++EMV++GFV DI+GHL+
Sbjct: 563 LLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLF 600


>ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548396|gb|EEF49887.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 546

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 27/38 (71%), Positives = 36/38 (94%)
 Frame = -2

Query: 768 LLNEMLEKGLVPNRITYDVIRDEMVERGFVSDIDGHLY 655
           LLNEMLEKGL+PNR+TY+++ +EM+E+GFV DI+GHLY
Sbjct: 503 LLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPDIEGHLY 540