BLASTX nr result
ID: Coptis23_contig00012937
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00012937
(2651 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA95414.1| transposon protein, putative, unclassified [Oryza... 565 e-158
gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japo... 565 e-158
gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [... 547 e-153
ref|XP_003532941.1| PREDICTED: protein FAR1-RELATED SEQUENCE 6-l... 546 e-152
ref|XP_002461440.1| hypothetical protein SORBIDRAFT_02g002703 [S... 442 e-121
>gb|ABA95414.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 862
Score = 565 bits (1455), Expect = e-158
Identities = 296/641 (46%), Positives = 395/641 (61%), Gaps = 3/641 (0%)
Frame = +2
Query: 191 KGFPVKIRSTERGANGVVKFVILACARSGTSRIQSKNLFKLKSVSKTGCKVKIRAAICAD 370
KGF V R +++ +G V++ LAC+R G ++ S N FK ++ C K+ + D
Sbjct: 46 KGFGVIKRGSKKTEDGKVRYFTLACSRQGKAQYTSTNKFKPNPSTRQQCPAKVNFYL-HD 104
Query: 371 GKLRVTTLTLDHNHGLIPGSSRFYXXXXXXXXXXXX-FDLKDEASIGENESFNSFPVEAG 547
K ++TLTLDHNH + P +R +L D+A I N++F+S ++AG
Sbjct: 105 EKFCISTLTLDHNHVVSPSKARHLRCHKKLDLQAKRRLELNDQARIRINKNFSSLVMQAG 164
Query: 548 GHENVPLSENDCFTIPSVTRGLRLGDGDAMALQNYLKKMQVNNANFFYLMDLDEDDGRLR 727
G+EN+ E +C R L+LG GDA A+ Y +M + NFFY+MD+DED RL+
Sbjct: 165 GYENLQFGEKECRNYLQDVRKLKLGAGDAHAVYQYFLRMTSKDPNFFYVMDVDEDS-RLK 223
Query: 728 NVFWADGRSRAAYEEFGDVVTFDTTYLTNKYNLPLALFVGVNHHGQSTLFGCGLILSEDV 907
NV W D RSRA YE F DVVTFDTTYLTNKY++P A FVGVNHHG+S L GC L+ +E+
Sbjct: 224 NVLWVDARSRATYESFSDVVTFDTTYLTNKYHMPFAPFVGVNHHGESVLLGCALLSNEET 283
Query: 908 GSFTWLFKSWLASMNGRAPTAIITDQDEAMKKAIEIVFPYTRRRWCLWHIMKKLPEKLGG 1087
+F WLF+SWL+ M+ +AP AIITDQ AM+ AI VFP R RWCLWHIMKK+PEKLGG
Sbjct: 284 ETFVWLFRSWLSCMSNKAPNAIITDQCRAMQNAIMEVFPEARHRWCLWHIMKKIPEKLGG 343
Query: 1088 CNQYDPIKDAMENAVYDSLTCEEFEGQWNSIIHNFSLQKNNWLSRLYKERNFWVPAFMKG 1267
+Y+ I + N VYDSL ++F+ W +I FSLQ N WL+ LY R WVPA++K
Sbjct: 344 YLEYEVISSTLSNVVYDSLNRDDFDKGWMKMIDEFSLQDNEWLAGLYDNRELWVPAYVKD 403
Query: 1268 TFWAGMSSPQRSEKLIAFFDGYVYPNTSIKQFVEQYENALRSKVQKENEEDFNSFDRWIP 1447
TFWAGMSS QRSE + AFFDGYV T++KQFVEQY+NALR KV+KEN+ D SF IP
Sbjct: 404 TFWAGMSSSQRSESVNAFFDGYVNARTTLKQFVEQYDNALRDKVEKENKSDCKSFQEAIP 463
Query: 1448 CITFYPLEKQFQDAYTTEIFKGFQNEIKGKIYCAISSIKEECGCQVYNVTEDMFGGTTRR 1627
CIT Y E+QFQ AYT + FK FQ+E++GKIY + K E ++V ED G R
Sbjct: 464 CITHYEFERQFQVAYTNKKFKEFQDELRGKIYYYATLRKTEGLVHTFSVREDRKIGEQRV 523
Query: 1628 AT-FSVCFKEGFCDIRCNCLLFEFRGILCKHALTVLLQKQVHTLPEKFFLRRWRKDVKRR 1804
+ V F + CD+ C C FEFRGILC+H L++L + +P K+ L+RWRKD KR+
Sbjct: 524 VSELLVLFNQEDCDLHCECRHFEFRGILCRHILSILPLVDIEKVPSKYILQRWRKDFKRK 583
Query: 1805 HKKIKIIYADWTVNPENERFDKMCKAFYEVADLAAVDEDKINVVICWTKRLLNELNLSDG 1984
H IK Y D P RFD +CK F EVA+ +V + N+V+ L +++ G
Sbjct: 584 HTFIKCSYDDQLDTPIVRRFDTLCKRFNEVAENGSVSDALCNLVMDGLNELQIKIDAHHG 643
Query: 1985 TRESDNCTPKVGTYVHSG-NSGPSAKESVSVGRPLAVHHKG 2104
++E + Y +G N K+ V P++V +G
Sbjct: 644 SKE-------IQEYQQNGKNKDMVLKQGKMVLSPISVRRRG 677
>gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japonica Group]
Length = 965
Score = 565 bits (1455), Expect = e-158
Identities = 296/641 (46%), Positives = 395/641 (61%), Gaps = 3/641 (0%)
Frame = +2
Query: 191 KGFPVKIRSTERGANGVVKFVILACARSGTSRIQSKNLFKLKSVSKTGCKVKIRAAICAD 370
KGF V R +++ +G V++ LAC+R G ++ S N FK ++ C K+ + D
Sbjct: 46 KGFGVIKRGSKKTEDGKVRYFTLACSRQGKAQYTSTNKFKPNPSTRQQCPAKVNFYL-HD 104
Query: 371 GKLRVTTLTLDHNHGLIPGSSRFYXXXXXXXXXXXX-FDLKDEASIGENESFNSFPVEAG 547
K ++TLTLDHNH + P +R +L D+A I N++F+S ++AG
Sbjct: 105 EKFCISTLTLDHNHVVSPSKARHLRCHKKLDLQAKRRLELNDQARIRINKNFSSLVMQAG 164
Query: 548 GHENVPLSENDCFTIPSVTRGLRLGDGDAMALQNYLKKMQVNNANFFYLMDLDEDDGRLR 727
G+EN+ E +C R L+LG GDA A+ Y +M + NFFY+MD+DED RL+
Sbjct: 165 GYENLQFGEKECRNYLQDVRKLKLGAGDAHAVYQYFLRMTSKDPNFFYVMDVDEDS-RLK 223
Query: 728 NVFWADGRSRAAYEEFGDVVTFDTTYLTNKYNLPLALFVGVNHHGQSTLFGCGLILSEDV 907
NV W D RSRA YE F DVVTFDTTYLTNKY++P A FVGVNHHG+S L GC L+ +E+
Sbjct: 224 NVLWVDARSRATYESFSDVVTFDTTYLTNKYHMPFAPFVGVNHHGESVLLGCALLSNEET 283
Query: 908 GSFTWLFKSWLASMNGRAPTAIITDQDEAMKKAIEIVFPYTRRRWCLWHIMKKLPEKLGG 1087
+F WLF+SWL+ M+ +AP AIITDQ AM+ AI VFP R RWCLWHIMKK+PEKLGG
Sbjct: 284 ETFVWLFRSWLSCMSNKAPNAIITDQCRAMQNAIMEVFPEARHRWCLWHIMKKIPEKLGG 343
Query: 1088 CNQYDPIKDAMENAVYDSLTCEEFEGQWNSIIHNFSLQKNNWLSRLYKERNFWVPAFMKG 1267
+Y+ I + N VYDSL ++F+ W +I FSLQ N WL+ LY R WVPA++K
Sbjct: 344 YLEYEVISSTLSNVVYDSLNRDDFDKGWMKMIDEFSLQDNEWLAGLYDNRELWVPAYVKD 403
Query: 1268 TFWAGMSSPQRSEKLIAFFDGYVYPNTSIKQFVEQYENALRSKVQKENEEDFNSFDRWIP 1447
TFWAGMSS QRSE + AFFDGYV T++KQFVEQY+NALR KV+KEN+ D SF IP
Sbjct: 404 TFWAGMSSSQRSESVNAFFDGYVNARTTLKQFVEQYDNALRDKVEKENKSDCKSFQEAIP 463
Query: 1448 CITFYPLEKQFQDAYTTEIFKGFQNEIKGKIYCAISSIKEECGCQVYNVTEDMFGGTTRR 1627
CIT Y E+QFQ AYT + FK FQ+E++GKIY + K E ++V ED G R
Sbjct: 464 CITHYEFERQFQVAYTNKKFKEFQDELRGKIYYYATLRKTEGLVHTFSVREDRKIGEQRV 523
Query: 1628 AT-FSVCFKEGFCDIRCNCLLFEFRGILCKHALTVLLQKQVHTLPEKFFLRRWRKDVKRR 1804
+ V F + CD+ C C FEFRGILC+H L++L + +P K+ L+RWRKD KR+
Sbjct: 524 VSELLVLFNQEDCDLHCECRHFEFRGILCRHILSILPLVDIEKVPSKYILQRWRKDFKRK 583
Query: 1805 HKKIKIIYADWTVNPENERFDKMCKAFYEVADLAAVDEDKINVVICWTKRLLNELNLSDG 1984
H IK Y D P RFD +CK F EVA+ +V + N+V+ L +++ G
Sbjct: 584 HTFIKCSYDDQLDTPIVRRFDTLCKRFNEVAENGSVSDALCNLVMDGLNELQIKIDAHHG 643
Query: 1985 TRESDNCTPKVGTYVHSG-NSGPSAKESVSVGRPLAVHHKG 2104
++E + Y +G N K+ V P++V +G
Sbjct: 644 SKE-------IQEYQQNGKNKDMVLKQGKMVLSPISVRRRG 677
>gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [Medicago truncatula]
Length = 1116
Score = 547 bits (1410), Expect = e-153
Identities = 287/623 (46%), Positives = 379/623 (60%), Gaps = 4/623 (0%)
Frame = +2
Query: 116 KDPEVGMEFGTLDEYMEYFSNYGYQKGF-PVKIRSTERGANGVVKFVILACARSGTSRIQ 292
++P +GM F + +E ++Y+ +Y GF VKI S + A K+ L C R+ +
Sbjct: 350 EEPRIGMTFSSEEEVIKYYKSYARCMGFGTVKINS--KNAKDGKKYFTLGCTRARSYVSN 407
Query: 293 SKNLFKLKSVSKTGCKVKIRAAICADGKLRVTTLTLDHNHGLIPGSSRFYXXXXXXXXXX 472
SKNL K + C ++ ++ DGK+ +T + L+HNHGL P SR++
Sbjct: 408 SKNLLKPNPTIRAQCMARVNMSMSLDGKITITKVALEHNHGLSPTKSRYFRCNKNLDPHT 467
Query: 473 XX-FDLKDEASIGENESFNSFPVEAGGHENVPLSENDCFTIPSVTRGLRLGDGDAMALQN 649
D+ D+A I + +F S VEA G++N+ E DC R LRLG GDA A+QN
Sbjct: 468 KRRLDINDQAGINVSRNFRSMVVEANGYDNLTFGEKDCRNYIDKARRLRLGTGDAEAIQN 527
Query: 650 YLKKMQVNNANFFYLMDLDEDDGRLRNVFWADGRSRAAYEEFGDVVTFDTTYLTNKYNLP 829
Y +MQ N+ F+Y+MD+D D RLRNVFW D R RAAYE FG+V+TFDTTYLTNKY++P
Sbjct: 528 YFVRMQKKNSQFYYVMDVD-DKSRLRNVFWVDARCRAAYEYFGEVITFDTTYLTNKYDMP 586
Query: 830 LALFVGVNHHGQSTLFGCGLILSEDVGSFTWLFKSWLASMNGRAPTAIITDQDEAMKKAI 1009
A FVGVNHHGQS L GC L+ +ED +F+WLFK+WL M+GRAP AIITDQD AMKKAI
Sbjct: 587 FAPFVGVNHHGQSVLLGCALLSNEDTKTFSWLFKTWLECMHGRAPNAIITDQDRAMKKAI 646
Query: 1010 EIVFPYTRRRWCLWHIMKKLPEKLGGCNQYDPIKDAMENAVYDSLTCEEFEGQWNSIIHN 1189
E VFP R RWCLWH+MKK+PEKLG + Y+ IK + +AVYDS + +F +W +I
Sbjct: 647 EDVFPKARHRWCLWHLMKKVPEKLGRHSHYESIKLLLHDAVYDSSSISDFMEKWKKMIEC 706
Query: 1190 FSLQKNNWLSRLYKERNFWVPAFMKGTFWAGMSSPQRSEKLIAFFDGYVYPNTSIKQFVE 1369
+ L N WL L+ ER WVP +++ TFWAGMS+ QRSE + +FFDGYV T++KQFVE
Sbjct: 707 YELHDNEWLKGLFDERYRWVPVYVRDTFWAGMSTTQRSESMNSFFDGYVSSKTTLKQFVE 766
Query: 1370 QYENALRSKVQKENEEDFNSFDRWIPCITFYPLEKQFQDAYTTEIFKGFQNEIKGKIYC- 1546
QY+NAL+ K++KE+ DF SF+ I CI+ + E QFQ A+T FK FQ EI IYC
Sbjct: 767 QYDNALKDKIEKESMADFVSFNTTIACISLFGFESQFQKAFTNAKFKEFQIEIASMIYCN 826
Query: 1547 AISSIKEECGCQVYNVTEDMFGGTTRRATFSVCFKEGFCDIRCNCLLFEFRGILCKHALT 1726
A E + + F V F E +I+C C LFEF+GILC+H L
Sbjct: 827 AFLEGMENLNSTFCVIESKKVYDRFKDTRFRVIFNEKDFEIQCACCLFEFKGILCRHILC 886
Query: 1727 VL-LQKQVHTLPEKFFLRRWRKDVKRRHKKIKIIYADWTVNPENERFDKMCKAFYEVADL 1903
VL L + ++P + L RWRKD+KRRH IK + N E + K C AFYEV +
Sbjct: 887 VLQLTGKTESVPSCYILSRWRKDIKRRHTLIK---CGFDGNVELQLVGKACDAFYEVVSV 943
Query: 1904 AAVDEDKINVVICWTKRLLNELN 1972
ED + V+ L ELN
Sbjct: 944 GIHTEDDLLKVMNRINELKIELN 966
>ref|XP_003532941.1| PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Glycine max]
Length = 669
Score = 546 bits (1407), Expect = e-152
Identities = 288/634 (45%), Positives = 397/634 (62%), Gaps = 4/634 (0%)
Frame = +2
Query: 83 IKECMENGEVLKDPEVGMEFGTLDEYMEYFSNYGYQKGFPVKIRSTERGANGVVKFVILA 262
+++ ++ E +++P+VGM F + E Y++N+ KGF V R+++ +G K+ LA
Sbjct: 19 LQKLVQFNEEVEEPKVGMTFPSEQEIFNYYTNFAQHKGFEVYRRTSKMEEDGK-KYFTLA 77
Query: 263 CARSGTSRIQSKNLFKLKSVSKTGCKVKIRAAICADGKLRVTTLTLDHNHGLIPGSSRFY 442
C S S + +L V+KT CK +I A +C DGK+RV ++ LDHNH L PG +R
Sbjct: 78 CVCSRRSENKRSHLLNPYLVTKTQCKARINACLCLDGKIRVLSVALDHNHELCPGKARLI 137
Query: 443 XXXXXXXXXXXX-FDLKDEASIGENESFNSFPVEAGGHENVPLSENDCFTIPSVTRGLRL 619
DL + A I + S S VEAG H ++ + + LR
Sbjct: 138 KYTKKSKPQRKRKHDLSNLAGINGDGSIQSPGVEAGEHGSLGFFDKNRRIFIQKASSLRF 197
Query: 620 GDGDAMALQNYLKKMQVNNANFFYLMDLDEDDGRLRNVFWADGRSRAAYEEFGDVVTFDT 799
GDA A+Q+Y +MQ N++F+Y+MDLD DD RLRNVFWAD RS+AA E FGDVVTFDT
Sbjct: 198 ESGDAEAIQSYFVRMQKINSSFYYVMDLD-DDCRLRNVFWADARSKAANEYFGDVVTFDT 256
Query: 800 TYLTNKYNLPLALFVGVNHHGQSTLFGCGLILSEDVGSFTWLFKSWLASMN-GRAPTAII 976
TYLTNKYN+PLALF+GVNHHGQS L G L+ +ED +FTWLF++WLA M+ G AP AII
Sbjct: 257 TYLTNKYNIPLALFLGVNHHGQSVLLGIALLSNEDAETFTWLFQTWLACMSTGHAPIAII 316
Query: 977 TDQDEAMKKAIEIVFPYTRRRWCLWHIMKKLPEKLGGCNQYDPIKDAMENAVYDSLTCEE 1156
T +D A+K AIEIVFP R+RWCL HIMK++ EKL G +Y+ IK + AVYDS + ++
Sbjct: 317 TREDRAIKTAIEIVFPKARQRWCLSHIMKRVSEKLRGYPRYESIKTDFDGAVYDSFSKDD 376
Query: 1157 FEGQWNSIIHNFSLQKNNWLSRLYKERNFWVPAFMKGTFWAGMSSPQRSEKLIAFFDGYV 1336
F W +I++ +L N WL+ LY ER+ WVP ++K TFWAGMS+ R+E + AFFDGYV
Sbjct: 377 FNESWKKLIYSHNLHDNEWLNSLYNERHRWVPVYVKDTFWAGMSTIDRNESVHAFFDGYV 436
Query: 1337 YPNTSIKQFVEQYENALRSKVQKENEEDFNSFDRWIPCITFYPLEKQFQDAYTTEIFKGF 1516
TS+KQF +Q++NA++ KV+KE DFNSF+ IPC + + +E QFQ YT FK F
Sbjct: 437 CSKTSLKQFFKQFDNAMKDKVEKECLADFNSFNNLIPCRSHFGIEYQFQKVYTNGKFKEF 496
Query: 1517 QNEIKGKIYCAISSIKEECGCQVYNVTED-MFGGTTRRATFSVCFKEGFCDIRCNCLLFE 1693
Q E+ +YC + K+E Y+V E + TF+V F E +++C C LFE
Sbjct: 497 QEEVACIMYCNAAFEKKEGLVSAYSVVESKKIQEAIKYVTFNVQFNEEDFEVQCECHLFE 556
Query: 1694 FRGILCKHALTVL-LQKQVHTLPEKFFLRRWRKDVKRRHKKIKIIYADWTVNPENERFDK 1870
F+GILC+H L++L L ++ ++P K+ WRKD+KR+H ++ Y D NPE ER DK
Sbjct: 557 FKGILCRHILSLLKLIRKTESVPSKYVFSHWRKDLKRKHTLVRSSYGDLIANPEAERLDK 616
Query: 1871 MCKAFYEVADLAAVDEDKINVVICWTKRLLNELN 1972
MC AF EVA + + V+ W L EL+
Sbjct: 617 MCNAFQEVACMGVNTDVDFKKVMKWIDDLKVELS 650
>ref|XP_002461440.1| hypothetical protein SORBIDRAFT_02g002703 [Sorghum bicolor]
gi|241924817|gb|EER97961.1| hypothetical protein
SORBIDRAFT_02g002703 [Sorghum bicolor]
Length = 614
Score = 442 bits (1138), Expect = e-121
Identities = 243/579 (41%), Positives = 322/579 (55%), Gaps = 3/579 (0%)
Frame = +2
Query: 191 KGFPVKIRSTERGANGVVKFVILACARSGTSRIQSKNLFKLKSVSKTGCKVKIRAAICAD 370
KGF + R T + + +++ LAC R G ++ S+N +KT C K+ +
Sbjct: 1 KGFTIT-RRTSKTMDEKLQYFTLACNRQGKAQC-SRNKLNQNPSTKTQCPAKLNFRLHDT 58
Query: 371 GKLRVTTLTLDHNHGLIPGSS--RFYXXXXXXXXXXXXFDLKDEASIGENESFNSFPVEA 544
K +T+L L+HNH LIP + + D + + +
Sbjct: 59 DKFCLTSLILEHNHDLIPSETGINVCRNKIPGVRAKRRSECTDNSKEETRLKLCANNAQG 118
Query: 545 GGHENVPLSENDCFTIPSVTRGLRLGDGDAMALQNYLKKMQVNNANFFYLMDLDEDDGRL 724
GG EN L EN+C L+ D L Y +MQ N NFFY MD DE+ RL
Sbjct: 119 GGFENPQLGENECTDNSKEETRLKFSAEDTHVLYQYFFRMQSKNPNFFYAMDFDENS-RL 177
Query: 725 RNVFWADGRSRAAYEEFGDVVTFDTTYLTNKYNLPLALFVGVNHHGQSTLFGCGLILSED 904
RNVFWAD RSRAAYE F DVV FD YLT+KY +PLA FVGVNHHG+ L GCGL+ +++
Sbjct: 178 RNVFWADARSRAAYESFSDVVKFDAAYLTSKYEVPLASFVGVNHHGEPILLGCGLLSNQN 237
Query: 905 VGSFTWLFKSWLASMNGRAPTAIITDQDEAMKKAIEIVFPYTRRRWCLWHIMKKLPEKLG 1084
SF WLFKS LA M+ + P +ITDQ + ++ A+E VFP T WCL +MKKLPEKL
Sbjct: 238 TESFVWLFKSLLACMSYKPPKGLITDQCDEVQDAVEQVFPQTYHSWCLLSVMKKLPEKLR 297
Query: 1085 GCNQYDPIKDAMENAVYDSLTCEEFEGQWNSIIHNFSLQKNNWLSRLYKERNFWVPAFMK 1264
G ++ + N VY+SLT EFE W + F LQ N WL +L W PA++K
Sbjct: 298 GFSKLKDFRFIFSNVVYESLTKCEFEKGWLEMTSKFGLQGNYWLIQLCINWQKWAPAYIK 357
Query: 1265 GTFWAGMSSPQRSEKLIAFFDGYVYPNTSIKQFVEQYENALRSKVQKENEEDFNSFDRWI 1444
TFWAGM+ + E A FDGYV T I QF+EQY ALR V+KE DF S
Sbjct: 358 DTFWAGMAVTKECESEYALFDGYVSSGTKINQFLEQYSKALRDMVEKEKNADFKSSHEVA 417
Query: 1445 PCITFYPLEKQFQDAYTTEIFKGFQNEIKGKIYCAISSIKEECGCQVYNVTEDM-FGGTT 1621
CIT Y +EKQFQ YT + F+ FQ ++KGKIYC +K+E +NV +D+
Sbjct: 418 SCITHYDIEKQFQLVYTNKKFEEFQEQLKGKIYCYPKLLKQEGTSYTFNVAQDVKIREQQ 477
Query: 1622 RRATFSVCFKEGFCDIRCNCLLFEFRGILCKHALTVLLQKQVHTLPEKFFLRRWRKDVKR 1801
FSV F CD++C C FEF+GILC H ++VL +V +P K+ L+RWRKD++R
Sbjct: 478 LTLDFSVWFNGDGCDVKCACRHFEFQGILCCHIISVLTLMKVKEVPSKYVLQRWRKDLER 537
Query: 1802 RHKKIKIIYADWTVNPENERFDKMCKAFYEVADLAAVDE 1918
+ I Y + P +RFD +CK+FY VA+ AA +
Sbjct: 538 SYTSIACSYDENVSTPIAQRFDVLCKSFYGVAEKAATSD 576