BLASTX nr result

ID: Coptis23_contig00012927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012927
         (1026 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315809.1| nucleobase ascorbate transporter [Populus tr...   333   e-104
ref|XP_003532028.1| PREDICTED: nucleobase-ascorbate transporter ...   329   e-103
ref|XP_002311584.1| nucleobase ascorbate transporter [Populus tr...   328   e-102
ref|XP_003628664.1| Nucleobase ascorbate transporter [Medicago t...   328   e-102
ref|XP_004135225.1| PREDICTED: nucleobase-ascorbate transporter ...   329   e-102

>ref|XP_002315809.1| nucleobase ascorbate transporter [Populus trichocarpa]
           gi|222864849|gb|EEF01980.1| nucleobase ascorbate
           transporter [Populus trichocarpa]
          Length = 534

 Score =  333 bits (855), Expect(2) = e-104
 Identities = 156/173 (90%), Positives = 168/173 (97%)
 Frame = +2

Query: 218 RVGSRRVVQISAGFMIFFSILGKFGAVFASIPAPIIAALYCLFFAYVGSAGLSFLQFCNL 397
           RVGSRRVVQISAGFMIFFSILGKFGAVFASIP+PIIAALYCLFFAYVGSAGLSFLQFCNL
Sbjct: 362 RVGSRRVVQISAGFMIFFSILGKFGAVFASIPSPIIAALYCLFFAYVGSAGLSFLQFCNL 421

Query: 398 NSFRTKFILGFSIFMGLSVPQYFNEYTVVKGFGPVHTKARWFNDMINVPFQSEAFVAGFL 577
           NSF+TKFILGFS+FMGLS+PQYFNEYT +KG+GPVHT ARWFNDMINVPF SE FVAGFL
Sbjct: 422 NSFKTKFILGFSVFMGLSIPQYFNEYTAIKGYGPVHTGARWFNDMINVPFSSEPFVAGFL 481

Query: 578 ALFLDVTLHRNDSATRKDRGVHWWDKFRSFRTDTRSEEFYSLPFNLNKFFPSV 736
           A+FLDVTLH+ D+ATRKDRG+HWWD+FRSF+TDTRSEEFYSLPFNLNKFFPSV
Sbjct: 482 AMFLDVTLHKKDTATRKDRGMHWWDRFRSFKTDTRSEEFYSLPFNLNKFFPSV 534



 Score = 72.4 bits (176), Expect(2) = e-104
 Identities = 33/41 (80%), Positives = 38/41 (92%)
 Frame = +3

Query: 3   PPSILSRGIGWQGIGILLSGLFGTITGSTVSAENAGLLALT 125
           PPSILSRG+GWQG+GIL SG+FGT +GS+VS ENAGLLALT
Sbjct: 321 PPSILSRGVGWQGVGILFSGIFGTGSGSSVSVENAGLLALT 361


>ref|XP_003532028.1| PREDICTED: nucleobase-ascorbate transporter 6-like [Glycine max]
          Length = 533

 Score =  329 bits (844), Expect(2) = e-103
 Identities = 156/173 (90%), Positives = 165/173 (95%)
 Frame = +2

Query: 218 RVGSRRVVQISAGFMIFFSILGKFGAVFASIPAPIIAALYCLFFAYVGSAGLSFLQFCNL 397
           RVGSRRVVQISAGFMIFFSILGKFGAVFASIPAPI+AALYCLFFAYVGSAGLSFLQFCNL
Sbjct: 361 RVGSRRVVQISAGFMIFFSILGKFGAVFASIPAPIVAALYCLFFAYVGSAGLSFLQFCNL 420

Query: 398 NSFRTKFILGFSIFMGLSVPQYFNEYTVVKGFGPVHTKARWFNDMINVPFQSEAFVAGFL 577
           NSFRTKFILGFSIFMG S+PQYFNEYT  KG+GPVHT+ARWFNDMINVPFQSEAFVAG L
Sbjct: 421 NSFRTKFILGFSIFMGFSIPQYFNEYTAFKGYGPVHTRARWFNDMINVPFQSEAFVAGML 480

Query: 578 ALFLDVTLHRNDSATRKDRGVHWWDKFRSFRTDTRSEEFYSLPFNLNKFFPSV 736
           AL LDVTL + D+ TRKDRG+HWWD+FRSF+TDTRSEEFYSLPFNLNKFFPSV
Sbjct: 481 ALLLDVTLRKKDNQTRKDRGMHWWDRFRSFKTDTRSEEFYSLPFNLNKFFPSV 533



 Score = 73.2 bits (178), Expect(2) = e-103
 Identities = 33/41 (80%), Positives = 38/41 (92%)
 Frame = +3

Query: 3   PPSILSRGIGWQGIGILLSGLFGTITGSTVSAENAGLLALT 125
           PPS+LSRG+GWQG+GILLSG+FGT  GS+VS ENAGLLALT
Sbjct: 320 PPSVLSRGVGWQGVGILLSGIFGTGNGSSVSVENAGLLALT 360


>ref|XP_002311584.1| nucleobase ascorbate transporter [Populus trichocarpa]
           gi|222851404|gb|EEE88951.1| nucleobase ascorbate
           transporter [Populus trichocarpa]
          Length = 534

 Score =  328 bits (842), Expect(2) = e-102
 Identities = 154/173 (89%), Positives = 165/173 (95%)
 Frame = +2

Query: 218 RVGSRRVVQISAGFMIFFSILGKFGAVFASIPAPIIAALYCLFFAYVGSAGLSFLQFCNL 397
           RVGSRRVVQISAGFMIFFSILGKFGAVFASIPAPIIAALYCLFFAYVGSAGLS LQFCNL
Sbjct: 362 RVGSRRVVQISAGFMIFFSILGKFGAVFASIPAPIIAALYCLFFAYVGSAGLSILQFCNL 421

Query: 398 NSFRTKFILGFSIFMGLSVPQYFNEYTVVKGFGPVHTKARWFNDMINVPFQSEAFVAGFL 577
           NSF+TKFILGFS+FMGLS+PQYFNEYT + G+GPVHT ARWFNDMINVPF SE FVAGFL
Sbjct: 422 NSFKTKFILGFSVFMGLSIPQYFNEYTAIHGYGPVHTGARWFNDMINVPFSSEPFVAGFL 481

Query: 578 ALFLDVTLHRNDSATRKDRGVHWWDKFRSFRTDTRSEEFYSLPFNLNKFFPSV 736
           A+FLDVTLH+ D+ TRKDRG+HWWD+FRSF+TDTRSEEFYSLPFNLNKFFPSV
Sbjct: 482 AMFLDVTLHKKDTTTRKDRGMHWWDRFRSFKTDTRSEEFYSLPFNLNKFFPSV 534



 Score = 72.4 bits (176), Expect(2) = e-102
 Identities = 33/41 (80%), Positives = 38/41 (92%)
 Frame = +3

Query: 3   PPSILSRGIGWQGIGILLSGLFGTITGSTVSAENAGLLALT 125
           PPSILSRG+GWQG+GIL SG+FGT +GS+VS ENAGLLALT
Sbjct: 321 PPSILSRGVGWQGVGILFSGIFGTGSGSSVSVENAGLLALT 361


>ref|XP_003628664.1| Nucleobase ascorbate transporter [Medicago truncatula]
           gi|355522686|gb|AET03140.1| Nucleobase ascorbate
           transporter [Medicago truncatula]
          Length = 549

 Score =  328 bits (841), Expect(2) = e-102
 Identities = 155/173 (89%), Positives = 164/173 (94%)
 Frame = +2

Query: 218 RVGSRRVVQISAGFMIFFSILGKFGAVFASIPAPIIAALYCLFFAYVGSAGLSFLQFCNL 397
           RVGSRRVVQISAGFMIFFSILGKFGAVFASIPAPI+AALYCLFFAYVGSAGLSFLQFCNL
Sbjct: 377 RVGSRRVVQISAGFMIFFSILGKFGAVFASIPAPIVAALYCLFFAYVGSAGLSFLQFCNL 436

Query: 398 NSFRTKFILGFSIFMGLSVPQYFNEYTVVKGFGPVHTKARWFNDMINVPFQSEAFVAGFL 577
           NSFRTKFILGFSIFMG S+PQYFNEYT  K +GPVHT+ARWFNDMINVPF SEAFVA  L
Sbjct: 437 NSFRTKFILGFSIFMGFSIPQYFNEYTAFKSYGPVHTRARWFNDMINVPFASEAFVASLL 496

Query: 578 ALFLDVTLHRNDSATRKDRGVHWWDKFRSFRTDTRSEEFYSLPFNLNKFFPSV 736
           A+FLDVTLH+ D+ TRKDRG+HWWDKFRSF+TDTRSEEFYSLPFNLNKFFPSV
Sbjct: 497 AMFLDVTLHKKDNQTRKDRGMHWWDKFRSFKTDTRSEEFYSLPFNLNKFFPSV 549



 Score = 72.4 bits (176), Expect(2) = e-102
 Identities = 32/41 (78%), Positives = 38/41 (92%)
 Frame = +3

Query: 3   PPSILSRGIGWQGIGILLSGLFGTITGSTVSAENAGLLALT 125
           PPS+LSRG+GWQG+GI+LSG+FGT  GS+VS ENAGLLALT
Sbjct: 336 PPSVLSRGVGWQGVGIMLSGIFGTGNGSSVSVENAGLLALT 376


>ref|XP_004135225.1| PREDICTED: nucleobase-ascorbate transporter 7-like [Cucumis
           sativus] gi|449478527|ref|XP_004155342.1| PREDICTED:
           nucleobase-ascorbate transporter 7-like [Cucumis
           sativus]
          Length = 534

 Score =  329 bits (843), Expect(2) = e-102
 Identities = 156/173 (90%), Positives = 164/173 (94%)
 Frame = +2

Query: 218 RVGSRRVVQISAGFMIFFSILGKFGAVFASIPAPIIAALYCLFFAYVGSAGLSFLQFCNL 397
           RVGSRRVVQISA FMIFFSILGKFGA+FASIPAPIIAALYC FFAYVGSAGLSFLQFCNL
Sbjct: 362 RVGSRRVVQISASFMIFFSILGKFGAIFASIPAPIIAALYCFFFAYVGSAGLSFLQFCNL 421

Query: 398 NSFRTKFILGFSIFMGLSVPQYFNEYTVVKGFGPVHTKARWFNDMINVPFQSEAFVAGFL 577
           NSFR KFILGFSIFMGLS+PQYFNEYT V G+GPVHT+ARWFNDMINVPF SE FVAGFL
Sbjct: 422 NSFRIKFILGFSIFMGLSIPQYFNEYTAVNGYGPVHTRARWFNDMINVPFASEPFVAGFL 481

Query: 578 ALFLDVTLHRNDSATRKDRGVHWWDKFRSFRTDTRSEEFYSLPFNLNKFFPSV 736
           ALFLDVTLH  D+AT+KDRG+HWWDKFRSF+TDTRSEEFYSLPFNLNKFFPSV
Sbjct: 482 ALFLDVTLHSKDNATKKDRGMHWWDKFRSFKTDTRSEEFYSLPFNLNKFFPSV 534



 Score = 71.2 bits (173), Expect(2) = e-102
 Identities = 32/41 (78%), Positives = 37/41 (90%)
 Frame = +3

Query: 3   PPSILSRGIGWQGIGILLSGLFGTITGSTVSAENAGLLALT 125
           PPS+LSRG+GWQG+GIL SG+FGT  GS+VS ENAGLLALT
Sbjct: 321 PPSVLSRGVGWQGVGILFSGIFGTGNGSSVSIENAGLLALT 361


Top