BLASTX nr result

ID: Coptis23_contig00012917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00012917
         (1144 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ02771.1| indole-3-glycerol phosphate lyase IGL1vs2 [Consol...   409   e-115
gb|ACJ02770.1| indole-3-glycerol phosphate lyase IGL1vs1 [Consol...   406   e-114
ref|XP_002281599.1| PREDICTED: indole-3-glycerol phosphate lyase...   407   e-113
emb|CBI17927.3| unnamed protein product [Vitis vinifera]              407   e-113
emb|CAN60260.1| hypothetical protein VITISV_007742 [Vitis vinifera]   405   e-112

>gb|ACJ02771.1| indole-3-glycerol phosphate lyase IGL1vs2 [Consolida orientalis]
          Length = 319

 Score =  409 bits (1051), Expect(2) = e-115
 Identities = 205/250 (82%), Positives = 228/250 (91%)
 Frame = +1

Query: 232 KVAFIPYITAGDPDLKTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALAKG 411
           +VAFIP+ITAGDPDL TTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATR LA+G
Sbjct: 70  RVAFIPFITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRVLARG 129

Query: 412 TNLNAIFSMLKEIIPQMSCPIALFTYYNPILKRGIGNFMATIKDVGVHGLVVPDVPLEET 591
           TN +AI +ML+ ++PQ+SCP+ALF+YYNPILKRGIG FM TIKDVGVHGLVVPDVPLEET
Sbjct: 130 TNFDAILAMLEGVVPQLSCPLALFSYYNPILKRGIGKFMTTIKDVGVHGLVVPDVPLEET 189

Query: 592 EILRKEALKNEIELVXXXXXXXXXDRMKAIVEASEGFVYLVSSIGVTGARASVSVRVQSL 771
            +LR+EALKN+IEL+         DRMKAIVEASEGFVYLVSSIGVTG+RASVS RVQSL
Sbjct: 190 AMLREEALKNQIELILLTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGSRASVSSRVQSL 249

Query: 772 LQEIKEASNKPVAVGFGISAPDHVKQLVGWGADGVIVGSAMVKLLGDAKSPEEGLKELEA 951
           LQEIKEASNKPVAVGFGIS P+HVKQ+ GWGADGVIVGSAMV+LL  AK+PEEGLKELEA
Sbjct: 250 LQEIKEASNKPVAVGFGISTPEHVKQIAGWGADGVIVGSAMVELLAHAKTPEEGLKELEA 309

Query: 952 FTRSLKAALP 981
           FT+SL+AA+P
Sbjct: 310 FTKSLRAAIP 319



 Score = 33.1 bits (74), Expect(2) = e-115
 Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 14/66 (21%)
 Frame = +2

Query: 5   KPTCFLPSSNKNFNNSLPRTPSLVP----------AMSSLSVTTPL----VGLSQTFTTL 142
           K TCFL SSN   N  L  +   +           +M+SL+V  P     V LS+TF  L
Sbjct: 6   KSTCFLQSSNPTNNLFLRSSTQKLKTSNISTKSRISMASLAVAPPTAATAVSLSETFIRL 65

Query: 143 RQQGKV 160
           ++QG+V
Sbjct: 66  KEQGRV 71


>gb|ACJ02770.1| indole-3-glycerol phosphate lyase IGL1vs1 [Consolida orientalis]
          Length = 319

 Score =  406 bits (1043), Expect(2) = e-114
 Identities = 204/250 (81%), Positives = 227/250 (90%)
 Frame = +1

Query: 232 KVAFIPYITAGDPDLKTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALAKG 411
           +VAFIP+ITAGDPDL TTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALA+G
Sbjct: 70  RVAFIPFITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALARG 129

Query: 412 TNLNAIFSMLKEIIPQMSCPIALFTYYNPILKRGIGNFMATIKDVGVHGLVVPDVPLEET 591
           TN +AI +ML+ ++PQ+SCP+ALF+YYNPILKRGIG FM TIKDVGVHGLVVPDVPLEET
Sbjct: 130 TNFDAILAMLEGVVPQLSCPLALFSYYNPILKRGIGKFMTTIKDVGVHGLVVPDVPLEET 189

Query: 592 EILRKEALKNEIELVXXXXXXXXXDRMKAIVEASEGFVYLVSSIGVTGARASVSVRVQSL 771
            +LR+EALKN+IEL+         DRMKAIVEASEGFVYLVSSIGVTG+RASVS RVQSL
Sbjct: 190 AMLREEALKNQIELILLTTPTTPTDRMKAIVEASEGFVYLVSSIGVTGSRASVSSRVQSL 249

Query: 772 LQEIKEASNKPVAVGFGISAPDHVKQLVGWGADGVIVGSAMVKLLGDAKSPEEGLKELEA 951
           LQEIKE SNKPVAVGFGIS P+ VKQ+ GWGADGVIVGSAMV+LL  AK+PEEGLKELEA
Sbjct: 250 LQEIKETSNKPVAVGFGISTPEQVKQIAGWGADGVIVGSAMVELLAHAKTPEEGLKELEA 309

Query: 952 FTRSLKAALP 981
           FT+SL+AA+P
Sbjct: 310 FTKSLRAAIP 319



 Score = 33.1 bits (74), Expect(2) = e-114
 Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 14/66 (21%)
 Frame = +2

Query: 5   KPTCFLPSSNKNFNNSLPRTPSLVP----------AMSSLSVTTPL----VGLSQTFTTL 142
           K TCFL SSN   N  L  +   +           +M+SL+V  P     V LS+TF  L
Sbjct: 6   KSTCFLQSSNPTNNLFLRSSTQKLKTSNISTKSRISMASLAVAPPTAATAVSLSETFIRL 65

Query: 143 RQQGKV 160
           ++QG+V
Sbjct: 66  KEQGRV 71


>ref|XP_002281599.1| PREDICTED: indole-3-glycerol phosphate lyase, chloroplastic [Vitis
           vinifera]
          Length = 316

 Score =  407 bits (1046), Expect(2) = e-113
 Identities = 204/249 (81%), Positives = 227/249 (91%)
 Frame = +1

Query: 232 KVAFIPYITAGDPDLKTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALAKG 411
           +VA IPYITAGDPDL TTAEALKVLDSCGSDIIELG+PYSDPLADGPVIQAAATR+LA+G
Sbjct: 67  QVALIPYITAGDPDLSTTAEALKVLDSCGSDIIELGLPYSDPLADGPVIQAAATRSLARG 126

Query: 412 TNLNAIFSMLKEIIPQMSCPIALFTYYNPILKRGIGNFMATIKDVGVHGLVVPDVPLEET 591
           TNLNA+ SMLKE++PQ+SCP+ALF+YYNPILKRGIG FM  IKDVGVHGLVVPDVPLEET
Sbjct: 127 TNLNAVISMLKEVVPQLSCPVALFSYYNPILKRGIGKFMTIIKDVGVHGLVVPDVPLEET 186

Query: 592 EILRKEALKNEIELVXXXXXXXXXDRMKAIVEASEGFVYLVSSIGVTGARASVSVRVQSL 771
           EILR E++KN IELV         DRMKAIV ASEGFVYLVSS+GVTGARASVS RVQ+L
Sbjct: 187 EILRMESIKNNIELVLLTTPTTPIDRMKAIVAASEGFVYLVSSVGVTGARASVSSRVQTL 246

Query: 772 LQEIKEASNKPVAVGFGISAPDHVKQLVGWGADGVIVGSAMVKLLGDAKSPEEGLKELEA 951
           LQEIK+A++KPVAVGFGIS P+HVKQ+V WGADGVIVGSAMVK+LG+AKSPEEGLKELE 
Sbjct: 247 LQEIKQATSKPVAVGFGISKPEHVKQVVAWGADGVIVGSAMVKVLGEAKSPEEGLKELET 306

Query: 952 FTRSLKAAL 978
           FT+SLK+AL
Sbjct: 307 FTKSLKSAL 315



 Score = 28.1 bits (61), Expect(2) = e-113
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +2

Query: 107 PLVGLSQTFTTLRQQGKV 160
           P VGLS+TF  LR+QG+V
Sbjct: 51  PAVGLSETFDKLRKQGQV 68


>emb|CBI17927.3| unnamed protein product [Vitis vinifera]
          Length = 273

 Score =  407 bits (1046), Expect(2) = e-113
 Identities = 204/249 (81%), Positives = 227/249 (91%)
 Frame = +1

Query: 232 KVAFIPYITAGDPDLKTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALAKG 411
           +VA IPYITAGDPDL TTAEALKVLDSCGSDIIELG+PYSDPLADGPVIQAAATR+LA+G
Sbjct: 24  QVALIPYITAGDPDLSTTAEALKVLDSCGSDIIELGLPYSDPLADGPVIQAAATRSLARG 83

Query: 412 TNLNAIFSMLKEIIPQMSCPIALFTYYNPILKRGIGNFMATIKDVGVHGLVVPDVPLEET 591
           TNLNA+ SMLKE++PQ+SCP+ALF+YYNPILKRGIG FM  IKDVGVHGLVVPDVPLEET
Sbjct: 84  TNLNAVISMLKEVVPQLSCPVALFSYYNPILKRGIGKFMTIIKDVGVHGLVVPDVPLEET 143

Query: 592 EILRKEALKNEIELVXXXXXXXXXDRMKAIVEASEGFVYLVSSIGVTGARASVSVRVQSL 771
           EILR E++KN IELV         DRMKAIV ASEGFVYLVSS+GVTGARASVS RVQ+L
Sbjct: 144 EILRMESIKNNIELVLLTTPTTPIDRMKAIVAASEGFVYLVSSVGVTGARASVSSRVQTL 203

Query: 772 LQEIKEASNKPVAVGFGISAPDHVKQLVGWGADGVIVGSAMVKLLGDAKSPEEGLKELEA 951
           LQEIK+A++KPVAVGFGIS P+HVKQ+V WGADGVIVGSAMVK+LG+AKSPEEGLKELE 
Sbjct: 204 LQEIKQATSKPVAVGFGISKPEHVKQVVAWGADGVIVGSAMVKVLGEAKSPEEGLKELET 263

Query: 952 FTRSLKAAL 978
           FT+SLK+AL
Sbjct: 264 FTKSLKSAL 272



 Score = 28.1 bits (61), Expect(2) = e-113
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +2

Query: 107 PLVGLSQTFTTLRQQGKV 160
           P VGLS+TF  LR+QG+V
Sbjct: 8   PAVGLSETFDKLRKQGQV 25


>emb|CAN60260.1| hypothetical protein VITISV_007742 [Vitis vinifera]
          Length = 273

 Score =  405 bits (1042), Expect(2) = e-112
 Identities = 203/249 (81%), Positives = 226/249 (90%)
 Frame = +1

Query: 232 KVAFIPYITAGDPDLKTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRALAKG 411
           +VA IPYITAGDPDL TTAEALKVLDSCGSDIIELG+PYSDPLADGPVIQAAATR+LA+G
Sbjct: 24  QVALIPYITAGDPDLSTTAEALKVLDSCGSDIIELGLPYSDPLADGPVIQAAATRSLARG 83

Query: 412 TNLNAIFSMLKEIIPQMSCPIALFTYYNPILKRGIGNFMATIKDVGVHGLVVPDVPLEET 591
           TN NA+ SMLKE++PQ+SCP+ALF+YYNPILKRGIG FM  IKDVGVHGLVVPDVPLEET
Sbjct: 84  TNFNAVISMLKEVVPQLSCPVALFSYYNPILKRGIGKFMTIIKDVGVHGLVVPDVPLEET 143

Query: 592 EILRKEALKNEIELVXXXXXXXXXDRMKAIVEASEGFVYLVSSIGVTGARASVSVRVQSL 771
           EILR E++KN IELV         DRMKAIV ASEGFVYLVSS+GVTGARASVS RVQ+L
Sbjct: 144 EILRMESIKNNIELVLLTTPTTPIDRMKAIVAASEGFVYLVSSVGVTGARASVSSRVQTL 203

Query: 772 LQEIKEASNKPVAVGFGISAPDHVKQLVGWGADGVIVGSAMVKLLGDAKSPEEGLKELEA 951
           LQEIK+A++KPVAVGFGIS P+HVKQ+V WGADGVIVGSAMVK+LG+AKSPEEGLKELE 
Sbjct: 204 LQEIKQATSKPVAVGFGISKPEHVKQVVAWGADGVIVGSAMVKVLGEAKSPEEGLKELET 263

Query: 952 FTRSLKAAL 978
           FT+SLK+AL
Sbjct: 264 FTKSLKSAL 272



 Score = 28.1 bits (61), Expect(2) = e-112
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +2

Query: 107 PLVGLSQTFTTLRQQGKV 160
           P VGLS+TF  LR+QG+V
Sbjct: 8   PAVGLSETFDKLRKQGQV 25


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