BLASTX nr result
ID: Coptis23_contig00012904
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00012904
(1597 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285580.1| PREDICTED: zinc finger CCCH domain-containin... 536 e-150
ref|XP_002515393.1| zinc finger protein, putative [Ricinus commu... 499 e-139
ref|XP_002324344.1| predicted protein [Populus trichocarpa] gi|2... 492 e-136
ref|XP_004138693.1| PREDICTED: zinc finger CCCH domain-containin... 487 e-135
ref|XP_003551813.1| PREDICTED: zinc finger CCCH domain-containin... 487 e-135
>ref|XP_002285580.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis
vinifera]
Length = 496
Score = 536 bits (1380), Expect = e-150
Identities = 277/476 (58%), Positives = 332/476 (69%), Gaps = 1/476 (0%)
Frame = +2
Query: 74 SLTAINEALVLDPTNSELSAVHEELLLAIRDAEEGLLHLKRARLLKEADSIFSTQTSKST 253
SL + EALV DPTNSEL +VHEEL+ AI+DAEEGL HLKRARLL+EADS + K T
Sbjct: 23 SLAVLKEALVSDPTNSELLSVHEELIWAIKDAEEGLFHLKRARLLREADS--ALHDHKYT 80
Query: 254 VEDAXXXXXXXXXXXXXXXXXXGFSVGSKCRFRYTDGSWYNGQIIGLDGSRSARVTFLTP 433
ED + VGSKCRFRYTDG WYNG I+GL+G SA+++FL+P
Sbjct: 81 AEDVKVEPLDPSDAEAEPLEEQSYHVGSKCRFRYTDGRWYNGVILGLEGLDSAKISFLSP 140
Query: 434 TSENMLICKFFLQQRCRFSTNCRLSHGIDVPLSSLKNYIPTVWKQISVGSNIWAISDPNA 613
TSENMLICKFFLQQRCRF TNCRLSHG+DV LSSLK Y PT+W+Q VGS+IWA+SD
Sbjct: 141 TSENMLICKFFLQQRCRFGTNCRLSHGVDVHLSSLKQYNPTIWEQSLVGSSIWAVSDAKY 200
Query: 614 GIWRKAELESWDDTLGLAQVVFQDDGSSRKVDGEGLSLSEYAQMSNXXXXXXXXXXQSYG 793
GIW++AELESWD+ L + +VVF+DDGSS K+ E +SLSEYA+MS+ S
Sbjct: 201 GIWKEAELESWDNELRVGKVVFRDDGSSEKLGTESISLSEYAEMSDGETDSSSEQSDSCD 260
Query: 794 SDDEESPEGLGFMEAAALQRGIQTDTAVFAKWENHTRGIASKMMANMGYREGMGLGASGQ 973
++EE +GLGF+E+ ALQRGIQT+TA+FAKWENHTRGIASKMMANMGYREGMGLGASGQ
Sbjct: 261 DEEEEGSQGLGFLESTALQRGIQTETAIFAKWENHTRGIASKMMANMGYREGMGLGASGQ 320
Query: 974 GMVDPITVKVLKPKQSLDHAFDSHKSDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1153
G+VDP++VKVL PKQSLDHA +SH+++ N
Sbjct: 321 GIVDPLSVKVLPPKQSLDHALESHENEENKESRGKKRSRGGKRKRDKKFAAAARAKKDKE 380
Query: 1154 XFNPDVFSFINNQLATQIVHQN-GSLSKRQSKDFGESKNEDRKSLIAYDNEVRDLRVQVE 1330
PDVFS IN QLA N GS K+Q+K GE K EDR++L+AYD+EVR+LR++VE
Sbjct: 381 ESRPDVFSLINTQLAMHGEALNGGSAKKQQNKSLGEGKKEDRRALVAYDDEVRELRIRVE 440
Query: 1331 KLEEMVNRNRKEKVVYEAFLRKLSETRKXXXXXXXXXXXXXXXXXXKEKEKRWLKF 1498
KLEEMVNRN+KEKVVYEA +RKL+ETRK +EKEKRWLKF
Sbjct: 441 KLEEMVNRNKKEKVVYEAAMRKLNETRKALAEAEAAHASASKAVVGREKEKRWLKF 496
>ref|XP_002515393.1| zinc finger protein, putative [Ricinus communis]
gi|223545337|gb|EEF46842.1| zinc finger protein, putative
[Ricinus communis]
Length = 495
Score = 499 bits (1286), Expect = e-139
Identities = 263/475 (55%), Positives = 319/475 (67%)
Frame = +2
Query: 74 SLTAINEALVLDPTNSELSAVHEELLLAIRDAEEGLLHLKRARLLKEADSIFSTQTSKST 253
SL A+N+AL DP+N EL +V EEL+ AI+DAE+GLLHLKRARLL+E DS + SK T
Sbjct: 24 SLAALNDALASDPSNHELLSVQEELVQAIKDAEDGLLHLKRARLLREVDS--ALHDSKDT 81
Query: 254 VEDAXXXXXXXXXXXXXXXXXXGFSVGSKCRFRYTDGSWYNGQIIGLDGSRSARVTFLTP 433
D SVGSKCRFR+ DG WYNG+II L+GS +A++ FLTP
Sbjct: 82 GNDVKIEPLDSDEVGAEPLEEHSHSVGSKCRFRHNDGRWYNGKIIELEGSTNAKIAFLTP 141
Query: 434 TSENMLICKFFLQQRCRFSTNCRLSHGIDVPLSSLKNYIPTVWKQISVGSNIWAISDPNA 613
TSENML CKFFLQQRCRF TNCRLSHG+DVPLSSL+ YIPT+W Q VGS+IWA+SD NA
Sbjct: 142 TSENMLTCKFFLQQRCRFGTNCRLSHGVDVPLSSLRTYIPTMWDQSMVGSSIWAVSDSNA 201
Query: 614 GIWRKAELESWDDTLGLAQVVFQDDGSSRKVDGEGLSLSEYAQMSNXXXXXXXXXXQSYG 793
GIWR+AELESWDD L + +VVF+DDGSS +++ + ++LSE+A S+
Sbjct: 202 GIWREAELESWDDKLRVGKVVFRDDGSSAELESDSMNLSEHALKSDEEESHSSSEQSDSS 261
Query: 794 SDDEESPEGLGFMEAAALQRGIQTDTAVFAKWENHTRGIASKMMANMGYREGMGLGASGQ 973
+EES +GLGF+E++ LQRGIQT+TA+FA+WENHTRGIASKMMANMGYR+GMGLGASGQ
Sbjct: 262 DYEEESAQGLGFLESSTLQRGIQTETAIFARWENHTRGIASKMMANMGYRDGMGLGASGQ 321
Query: 974 GMVDPITVKVLKPKQSLDHAFDSHKSDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1153
GMVDPI+VKVL PKQSLDHA S K +
Sbjct: 322 GMVDPISVKVLPPKQSLDHALQSQKEEEIRENHGKKRSRGGKRKREKKLAALAKEAKEEE 381
Query: 1154 XFNPDVFSFINNQLATQIVHQNGSLSKRQSKDFGESKNEDRKSLIAYDNEVRDLRVQVEK 1333
NPDVFS IN QLA NG SK + SK DR+ LIAYD+E+++LR++ EK
Sbjct: 382 EMNPDVFSLINIQLAKHNEALNGG-SKTKQHHNKVSKKVDRRVLIAYDDEMKELRLRAEK 440
Query: 1334 LEEMVNRNRKEKVVYEAFLRKLSETRKXXXXXXXXXXXXXXXXXXKEKEKRWLKF 1498
LEEM +RN+KEKVVYEA +RKL+ETRK KEKEK+WLKF
Sbjct: 441 LEEMASRNKKEKVVYEAAMRKLNETRKALAEAEAAHASASNAVVSKEKEKKWLKF 495
>ref|XP_002324344.1| predicted protein [Populus trichocarpa] gi|222865778|gb|EEF02909.1|
predicted protein [Populus trichocarpa]
Length = 495
Score = 492 bits (1267), Expect = e-136
Identities = 261/475 (54%), Positives = 312/475 (65%)
Frame = +2
Query: 74 SLTAINEALVLDPTNSELSAVHEELLLAIRDAEEGLLHLKRARLLKEADSIFSTQTSKST 253
SL A+N+AL DP+N EL +V EELL I+D EEGLLHLKRARLL+EADS+ S T
Sbjct: 24 SLAALNDALASDPSNPELLSVQEELLQVIKDVEEGLLHLKRARLLREADSVL--HASYHT 81
Query: 254 VEDAXXXXXXXXXXXXXXXXXXGFSVGSKCRFRYTDGSWYNGQIIGLDGSRSARVTFLTP 433
VED +SVGSKCRFR+ DG WYNGQII L S +A++ FLTP
Sbjct: 82 VEDVKAEPLDPVHVEPEPLEDQCYSVGSKCRFRHVDGRWYNGQIIELVCSDTAKIAFLTP 141
Query: 434 TSENMLICKFFLQQRCRFSTNCRLSHGIDVPLSSLKNYIPTVWKQISVGSNIWAISDPNA 613
SENMLICKFFLQ+RCRF T+CRLSHG+DV LSSLKNY+PT+W Q VGS+IWA+SD N
Sbjct: 142 ISENMLICKFFLQERCRFGTSCRLSHGVDVSLSSLKNYVPTMWDQSLVGSSIWALSDSNV 201
Query: 614 GIWRKAELESWDDTLGLAQVVFQDDGSSRKVDGEGLSLSEYAQMSNXXXXXXXXXXQSYG 793
GIWRKAELESWD+ + QVVF D GSS K+ E +++SEYA MS+
Sbjct: 202 GIWRKAELESWDNEHRVGQVVFHDGGSSAKLGSEAMTISEYALMSDEEETDSSSEGSDSS 261
Query: 794 SDDEESPEGLGFMEAAALQRGIQTDTAVFAKWENHTRGIASKMMANMGYREGMGLGASGQ 973
DEES EGLGF+E+ LQRGIQT TA+FA WENHTRGIASKMMANMGYREGMGLGASGQ
Sbjct: 262 DYDEESAEGLGFLESTNLQRGIQTGTAIFATWENHTRGIASKMMANMGYREGMGLGASGQ 321
Query: 974 GMVDPITVKVLKPKQSLDHAFDSHKSDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1153
GM+DPI VKVL PKQSLDHA +S K +G
Sbjct: 322 GMLDPIPVKVLPPKQSLDHALESQK-EGIKDNHGKKRSRGGKRKREKKFAAAARAAKAEE 380
Query: 1154 XFNPDVFSFINNQLATQIVHQNGSLSKRQSKDFGESKNEDRKSLIAYDNEVRDLRVQVEK 1333
PDVF+ INNQLA N +K+Q E K +R+ L+AYD+E+++LR++VEK
Sbjct: 381 ETRPDVFTLINNQLAGHNEALNSESAKKQKSKGSEEKKVNRQDLLAYDDEIKELRIRVEK 440
Query: 1334 LEEMVNRNRKEKVVYEAFLRKLSETRKXXXXXXXXXXXXXXXXXXKEKEKRWLKF 1498
LE+M NRN+KEKVVYE+ +RKL+ETR +EKEK+WLKF
Sbjct: 441 LEDMANRNKKEKVVYESAMRKLNETRIALAKAEASKASASNAITGREKEKKWLKF 495
>ref|XP_004138693.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Cucumis sativus]
Length = 497
Score = 487 bits (1254), Expect = e-135
Identities = 261/478 (54%), Positives = 323/478 (67%), Gaps = 3/478 (0%)
Frame = +2
Query: 74 SLTAINEALVLDPTNSELSAVHEELLLAIRDAEEGLLHLKRARLLKEADSIFSTQTSKST 253
SL A+ +AL DP+NSEL VHEEL+ AI+DAEEGLLHLKR+RLL+EAD++ S +
Sbjct: 23 SLAALQDALASDPSNSELLEVHEELVQAIKDAEEGLLHLKRSRLLREADTVLRGHDSNAA 82
Query: 254 VEDAXXXXXXXXXXXXXXXXXXGFSVGSKCRFRYTDGSWYNGQIIGLDGSRSARVTFLTP 433
ED F VGSKCRFRYTDG WY+G+I+GLDGS SA+++FLTP
Sbjct: 83 -EDVKVEPLDATDIKPEPLEDHSFFVGSKCRFRYTDGRWYDGEIVGLDGSNSAKISFLTP 141
Query: 434 TSENMLICKFFLQQRCRFSTNCRLSHGIDVPLSSLKNYIPTVWKQISVGSNIWAISDPNA 613
T+ENML+CKFFLQQRCRF TNCRLSHG+D+PL+SL++Y+PT+W Q GS+I A+S N
Sbjct: 142 TTENMLMCKFFLQQRCRFGTNCRLSHGVDIPLTSLRSYVPTIWNQSMAGSSILALSSRN- 200
Query: 614 GIWRKAELESWDDTLGLAQVVFQDDGSSRKVDGEGLSLSEYAQMSNXXXXXXXXXXQSYG 793
IWR AELESWDD L +AQVVF+ DG S+K+ E ++LSEYA + N QS
Sbjct: 201 DIWRHAELESWDDALQVAQVVFKGDGYSQKLGPEDIALSEYA-LINDEEESDSSLEQSDS 259
Query: 794 SDDEESP-EGLGFMEAAALQRGIQTDTAVFAKWENHTRGIASKMMANMGYREGMGLGASG 970
SD EE +GLGF+E++ Q+GIQT+T +FAKWENHTRGIASKMMANMGYREGMGLGASG
Sbjct: 260 SDYEEDDLQGLGFLESSTQQKGIQTETTIFAKWENHTRGIASKMMANMGYREGMGLGASG 319
Query: 971 QGMVDPITVKVLKPKQSLDHAFDSHKSDG-NXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1147
QGM++PI VKVL KQSLDHA +S K + N
Sbjct: 320 QGMLNPIPVKVLPAKQSLDHALESQKENNTNDENNGKKRSRGGKRKREKKFAAASRAAKE 379
Query: 1148 XXXFNPDVFSFINNQLATQIVHQN-GSLSKRQSKDFGESKNEDRKSLIAYDNEVRDLRVQ 1324
PDVF+ IN+ LA N GS+ K++ K + K DR+++IAYD+EV+DLR++
Sbjct: 380 EEESRPDVFNLINHHLAMHNRALNDGSVKKQKDKGSADWKKVDRRTIIAYDDEVKDLRIR 439
Query: 1325 VEKLEEMVNRNRKEKVVYEAFLRKLSETRKXXXXXXXXXXXXXXXXXXKEKEKRWLKF 1498
+EKLEEMVNRN+KEKVVYEA LRKL+ETRK +EKEKRWLKF
Sbjct: 440 IEKLEEMVNRNKKEKVVYEAALRKLNETRKALAEAEAAHASASNAVNSREKEKRWLKF 497
>ref|XP_003551813.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
[Glycine max]
Length = 492
Score = 487 bits (1253), Expect = e-135
Identities = 263/477 (55%), Positives = 322/477 (67%), Gaps = 2/477 (0%)
Frame = +2
Query: 74 SLTAINEALVLDPTNSELSAVHEELLLAIRDAEEGLLHLKRARLLKEADSIFSTQTSKST 253
SL+AI +AL+ DPTN EL AVHEEL+ AI+DAEEGLLHLKRARLL+EADS+ +
Sbjct: 23 SLSAIGQALLSDPTNPELLAVHEELVQAIKDAEEGLLHLKRARLLQEADSVL--HNTNIF 80
Query: 254 VEDAXXXXXXXXXXXXXXXXXXGFSVGSKCRFRYTDGSWYNGQIIGLDGSRSARVTFLTP 433
E+ +SVGSKCRFR+ DG WYNGQ++ LD + A+V+FLTP
Sbjct: 81 TEEEKVEPLDSTDVEPEPLEDKCYSVGSKCRFRHKDGRWYNGQVVQLDNA-VAKVSFLTP 139
Query: 434 TSENMLICKFFLQQRCRFSTNCRLSHGIDVPLSSLKNYIPTVWKQISVGSNIWAISDPNA 613
TSENML+CKFFLQQRCRF +NCRLSHG+DV LS+LK Y+PT+WKQ VGS+IWA+S NA
Sbjct: 140 TSENMLMCKFFLQQRCRFGSNCRLSHGLDVQLSALKKYVPTIWKQSLVGSSIWAVSTANA 199
Query: 614 GIWRKAELESWDDTLGLAQVVFQDDGSSRKVDGEGLSLSEYAQMSNXXXXXXXXXXQSYG 793
G WR+AELES D+ G+ QVVF+D+GSS KV E ++LSE+A+MS+ QS
Sbjct: 200 GTWREAELESLDEKAGVGQVVFRDNGSSVKVGAEEMALSEHAEMSD--LESDSSLVQSDS 257
Query: 794 SD-DEESPEGLGFMEAAALQRGIQTDTAVFAKWENHTRGIASKMMANMGYREGMGLGASG 970
SD +EE P+GLGF+E+ L+RGIQT+TA FA WENHTRGIASKMMANMGYREGMGLG +G
Sbjct: 258 SDYEEEEPQGLGFLESTNLRRGIQTETATFATWENHTRGIASKMMANMGYREGMGLGVTG 317
Query: 971 QGMVDPITVKVLKPKQSLDHAFDSHKSDGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1150
QGM+DPI VKVL PKQSLDHA +SHK +G
Sbjct: 318 QGMLDPIPVKVLPPKQSLDHALESHKREGKEGKKKRSRGGKRKREKKFAEVNRAAKEEEE 377
Query: 1151 XXFNPDVFSFINNQLATQI-VHQNGSLSKRQSKDFGESKNEDRKSLIAYDNEVRDLRVQV 1327
DVF+ INN LA +GS+ K+QSK E K DR++L+AY+ EV+DL+++V
Sbjct: 378 SA--SDVFALINNHLAMHSEAFGSGSMKKQQSKGSEEGKKVDRRALVAYEEEVKDLKMRV 435
Query: 1328 EKLEEMVNRNRKEKVVYEAFLRKLSETRKXXXXXXXXXXXXXXXXXXKEKEKRWLKF 1498
EKLE +VN NRKEK VYE +RKL+ETRK KEKEKRWLKF
Sbjct: 436 EKLEHIVNANRKEKAVYEGAMRKLNETRKALADAEAVHASASNSVTSKEKEKRWLKF 492