BLASTX nr result
ID: Coptis23_contig00012900
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00012900 (218 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002527423.1| multidrug resistance-associated protein 1, 3... 60 2e-07 ref|XP_003532999.1| PREDICTED: ABC transporter C family member 8... 57 1e-06 ref|XP_002276193.2| PREDICTED: ABC transporter C family member 8... 55 8e-06 emb|CBI35971.3| unnamed protein product [Vitis vinifera] 55 8e-06 >ref|XP_002527423.1| multidrug resistance-associated protein 1, 3 (mrp1, 3), abc-transoprter, putative [Ricinus communis] gi|223533233|gb|EEF34989.1| multidrug resistance-associated protein 1, 3 (mrp1, 3), abc-transoprter, putative [Ricinus communis] Length = 1475 Score = 60.1 bits (144), Expect = 2e-07 Identities = 26/72 (36%), Positives = 43/72 (59%) Frame = -2 Query: 217 GDFYGICQGEFNLGSPCIQKIIVDGXXXXXXXXXXXXXLVEYVRRHSISQNTRKDWVFLA 38 G+ IC+ + +LGSPC Q+II+D L+ +R+H +S + R+DW+ + Sbjct: 16 GELSWICEEKLDLGSPCTQRIIIDIINLVFLGVFYLFLLLGSIRKHQVSGSNRRDWISVV 75 Query: 37 CSVCCLIISIAH 2 S+CC +ISIA+ Sbjct: 76 VSICCTLISIAY 87 >ref|XP_003532999.1| PREDICTED: ABC transporter C family member 8-like [Glycine max] Length = 1494 Score = 57.4 bits (137), Expect = 1e-06 Identities = 31/71 (43%), Positives = 38/71 (53%) Frame = -2 Query: 214 DFYGICQGEFNLGSPCIQKIIVDGXXXXXXXXXXXXXLVEYVRRHSISQNTRKDWVFLAC 35 DF C +F+L S C Q I+D LV +RRHS + RK+WVFL Sbjct: 35 DFSWTCLRDFDLTSLCSQTSIIDILKLLFIAVFYTSLLVSLIRRHSECGSNRKNWVFLVV 94 Query: 34 SVCCLIISIAH 2 SVCC +ISIAH Sbjct: 95 SVCCALISIAH 105 >ref|XP_002276193.2| PREDICTED: ABC transporter C family member 8-like [Vitis vinifera] Length = 1462 Score = 54.7 bits (130), Expect = 8e-06 Identities = 26/72 (36%), Positives = 39/72 (54%) Frame = -2 Query: 217 GDFYGICQGEFNLGSPCIQKIIVDGXXXXXXXXXXXXXLVEYVRRHSISQNTRKDWVFLA 38 G F +C E +LGS CIQ+ I+D ++ Y+R+H IS +R+DWV Sbjct: 9 GGFSWVCGEELDLGSFCIQRTILDVLNLLFLSVFSVILVIGYIRKHEISGCSRRDWVSGG 68 Query: 37 CSVCCLIISIAH 2 S+CC + IA+ Sbjct: 69 VSICCALTGIAY 80 >emb|CBI35971.3| unnamed protein product [Vitis vinifera] Length = 2772 Score = 54.7 bits (130), Expect = 8e-06 Identities = 26/72 (36%), Positives = 39/72 (54%) Frame = -2 Query: 217 GDFYGICQGEFNLGSPCIQKIIVDGXXXXXXXXXXXXXLVEYVRRHSISQNTRKDWVFLA 38 G F +C E +LGS CIQ+ I+D ++ Y+R+H IS +R+DWV Sbjct: 31 GGFSWVCGEELDLGSFCIQRTILDVLNLLFLSVFSVILVIGYIRKHEISGCSRRDWVSGG 90 Query: 37 CSVCCLIISIAH 2 S+CC + IA+ Sbjct: 91 VSICCALTGIAY 102